Cyprinus carpio (common carp): 109047005
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Entry
109047005 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 2-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04020
Calcium signaling pathway
ccar04080
Neuroactive ligand-receptor interaction
ccar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109047005
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109047005
04082 Neuroactive ligand signaling
109047005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109047005
Ion channels [BR:
ccar04040
]
Ligand-gated channels
Glutamate (ionotropic)
109047005
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Paralog
GFIT
Motif
Pfam:
Lig_chan
BTK
Motif
Other DBs
NCBI-GeneID:
109047005
NCBI-ProteinID:
XP_042601657
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All DBs
Position
B19:20856207..20874901
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AA seq
1312 aa
AA seq
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MMFVMCLSVVAVTFIFEFFSPVGFITNEAYRAGRVQAGAFKVHHRESIWLLWXLVFNNSV
PVENPRGTSKIMVLVWAFFAVIFLASYTANLSAFMIQEEYIDTVSGLSDKKFQQPTEQYP
PLRFGTVPNGSTEENIRSNYPNMHQYMVRNNQRGVEEAIDNLKTGKLDAFIYDAAVLNYM
ARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIDMLERLWLSG
ICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLIYWKLRHCLGHSGGLDFL
LAFSRGMYSCCNFEDETAPGGSQSTLPQYHHVSTVPPPPPPHVISTAVANPPIAMAQQQQ
QQQQQKQHHQQPPVYSALFPGSPPSVGHSGMALGPSNSPILGAPMPCSTFLPRHDRRFAV
VDRWTRPKVGPEKLGGVSSGITDLTQFQGMPPHWGAEISGGEGGLDEYKRYYGPIDPEGL
GVSAEPQNIVTQTPKTKHRGTKSSGNPRLPPKVQASGHLPINHALPHPSPPQQSIWRRSS
FSKRKGSGGPLYENILPLGRRGGGRYGMRDGGGRRGRRPPPLPLPIPVPLSSPTQTPPTP
SPSICYTSTSSSSSSTSSSSSSSESVSRSNSPSSSSSYTSSQSFRYRADARDVYDYDTDE
LTEESSLLLGRRKSRSRMSSRSLPSSPPPPPIPPRKPCGQRAEVRDRAGSQIAQLQEWWA
SWGEKEKSRRAAGDRDVKEEKRHHKERERERKRRKKGRKKKKREERERERERKRRKVKKK
KKKEQKSRRREREKRSEQEEVDMDRKDVSEKGIGQEYSSYPALRRSSFRKKSESSTRSYE
WDNIRDGVKRERDDQGGEDEEGSRVKERHQRSPKSQRHSRPRSNNKHFSSSNKPSSTVKF
WSSGNPTSDSPSSFVPLLPISKRRKSVGAERDERGRGGESRPLLGKNKRVKPCSREGLSF
HEWDSEEEEDEESEVERSRPEEQGRRRESRGMDSESERDREKTVEIYTDDEGSSGEFGKF
ERYWEGHEGRAVGGIGGGGWFFGTYPARERGGSINSRDDSFLGWGGGESVLGFGAGTGWG
SGGLGSNKWPPTPLTPPPPRKYWSVDKLPVKTEKKSKSRSQEKSHAHTSCSCQSPHHSAS
THSKWNRVTSRSQEELLPHCHSFSSSVRPKRQSSKPDRAQSQTKSGSQSNLNAQRPQRSD
RSRQPPSPPQSLPPSLPPPMVPALPAPPSSSHHIHIPPPTSSSSVSSPSVVSSTPGAPQP
SSLSSSSAKLQYQKLRSVPQPQRYQSPHLPLKTKSLCSRRGSAHFSSVESEV
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgtcatgtgcctgtctgtggtagctgtgacgttcatattcgagttcttcagc
cctgttggatttataacgaatgaagcctacagagcgggaagagtacaggcaggagcgttc
aaagttcaccatagggagtctatttggctgctgtggngcttggtgtttaataactctgtt
ccggtggaaaacccgagaggcacaagtaagataatggtgctggtctgggctttctttgct
gtcatcttcctggccagctacaccgctaacctgtctgctttcatgattcaagaagagtac
atcgacactgtgtctgggctcagtgataagaagtttcagcagcccacagagcagtatcct
cctttacgcttcggcactgtcccaaacggaagtacggaggagaatatacggagcaattac
cccaacatgcatcagtatatggtgcggaacaatcagagaggagtggaagaggccattgac
aaccttaagacagggaaactggatgcattcatatatgatgcggctgtcctgaactacatg
gctcgtaaggatgagggctgcaaagtaatgaccatcggctctggcaaagtgttcgctaca
acaggttatggcattgccttacacaaaaactcccgctggaagcggccgctagacctcgcc
ctcctgcagctagttggagatgatgagattgacatgcttgaacgactctggctgtctggg
atctgtcataatgataagattgaggtcatgagttccaaactggacatagacaatatggca
ggagtcttctatatgcttctggttgccatgggcctaagtctgctggtgtttgcatgggag
catctcatctattggaagctccgccactgtttgggccactctggaggactggatttcctg
ctggctttcagtcggggaatgtacagctgctgcaattttgaggatgaaacagctcctgga
ggttcccaaagcacacttcctcaatatcatcatgtctccacagttcctcctcctccaccg
cctcatgtgatctctacagccgtggcaaatccccccatcgctatggcacaacaacaacag
cagcagcaacaacagaagcaacaccaccaacagccaccggtatacagtgctctttttcct
ggatcccctccttcagttggacattctggaatggctctaggcccatcaaacagtcccatt
cttggagcacccatgccttgctctacattcctaccacggcatgatcgtcgatttgctgtg
gtggatcggtggacacgtccaaaggttggtcctgagaagcttggcggtgtgagcagtggg
ataacagacttaacacaattccaaggcatgccccctcactggggtgcagaaataagtgga
ggagaggggggtctggatgagtacaagagatactatgggccaattgatccagaaggctta
ggggtctctgctgaacctcaaaacatagtcacccaaactccaaaaacgaagcatcgaggg
acgaaatcttctggtaacccacggttacctcctaaagttcaagcctctggacacttacca
attaaccatgctttgccacatccttctccacctcagcaatctatctggaggagaagcagc
ttctcaaaaaggaagggctctggtgggccactctacgaaaacatccttccactcggaagg
agaggtggtggcagatatggaatgagggatggcggtgggagaagaggacgtcgtcctcct
ccccttcctttacctatacctgtgcccctctcttccccaacacagactccgcccacacct
tctccatctatatgctacacatccacttcatccagcagctccagcacctccagttcatcc
tcttcttcagaatcagtctcccgatccaattctccttcatcttcatcatcgtacacatca
tcccagagctttagatacagagcagatgcacgagatgtgtatgactacgacacagatgag
cttacggaggaatcaagcttgcttttggggaggagaaaaagtcgttcacgtatgtcctct
cgttccctgcccagcagtcctcctccaccacctataccaccccgcaaaccttgcggacag
agggcggaggtgagagacagagcaggcagccagattgcacagcttcaagagtggtgggcc
tcttggggagagaaagaaaagagtagaagagcagctggagatagagatgttaaggaggag
aaacgacatcataaagaaagggaaagagagagaaagaggaggaagaagggtagaaagaaa
aagaagagagaagagcgtgaaagagaaagggagcgtaaaagacgtaaggtgaaaaagaaa
aagaaaaaagagcagaaatcaagaagaagagagagggaaaaacgatctgaacaagaggag
gtagatatggacaggaaagatgtctctgaaaaaggtataggacaggaatactcttcttat
cctgctctgaggcgaagctctttccgaaaaaagagtgaaagctctactaggagttatgag
tgggataatatcagagatggagttaagagagagagggatgatcaaggtggagaagatgaa
gaaggcagtagagtaaaggaaaggcatcagagaagcccaaaatcacaacgccactccagg
ccaaggtccaacaacaagcatttttctagctcaaacaaaccttcttcaaccgtcaaattt
tggagtagtgggaacccaacttctgattcgccatcgtcttttgtacccttgcttcccata
tctaaaagacgaaagtctgtaggagctgaaagggacgagcgaggaagaggtggagagagt
cggccccttttgggaaaaaacaagagagttaagccttgctcaagagaaggcctgtcattt
cacgaatgggattcagaggaagaagaagatgaggagtctgaagtggaaagaagcaggcca
gaagaacaggggcgacgacgagaaagcagaggaatggactctgaatccgaaagggacaga
gaaaaaactgttgagatatacacagacgatgagggttcatcgggagagtttggtaagttc
gagcgatattgggagggtcacgaaggaagggcagttggaggcattggaggaggaggatgg
ttctttggcacctatcctgccagagaaagaggaggcagtataaacagtagagatgactcc
tttttggggtggggtggtggagaaagtgtcctgggtttcggagcgggaacagggtgggga
tcaggaggcttaggttcaaacaagtggcctccaactccattgactccgccaccacctcga
aaatactggtctgttgataaattaccagtgaagactgaaaagaaatctaaaagcaggtct
caagagaagagccacgcccacacatcctgttcctgccagtcaccccatcactctgccagc
actcactccaaatggaatagggtgacttctaggagtcaggaggagctcctcccccactgc
cacagtttcagcagcagcgtaagacccaaacggcaatcatccaaaccggatcgggctcag
agccagacaaaatctggaagccaatccaatctcaatgcacaaagaccacagcgctcagac
cggtcccgacaaccaccatcccctcctcaaagtctaccgccatctttacccccaccaatg
gtccctgcactcccagccccgccctcttcctctcaccatatacatatacctccacctacc
tcctcttcatcagtttcctccccttcggttgtctcatctactcctggtgccccacagccc
tcctctttgtcctcctctagtgctaagctccagtaccagaaactgcgatcagttccccaa
ccccaacggtatcaatccccacatcttcccctcaaaaccaagagcctgtgctctcgtcga
ggctctgcccacttctccagtgtggagagtgaggtctga
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