Cyprinus carpio (common carp): 109047007
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Entry
109047007 CDS
T05134
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109047007 (lingo3a)
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
109047007 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
LRR_1
ig
LRR_LRWD1
Ig_2
LRR_14
LRRNT
LRR_9
Cupin_1
V-set
LRR_Zer-1
Ig_6
Motif
Other DBs
NCBI-GeneID:
109047007
NCBI-ProteinID:
XP_042605339
Ensembl:
ENSCCRG00000012471
ENSCCRG00000012485
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All DBs
Position
B22:complement(24979117..24981826)
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AA seq
605 aa
AA seq
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MAGCPSLSLPGLFVLLIAASLTHGQTCPQRCDCIPHQRAVMCQNKRIGSIPGGIPTDTRL
LDLSCNSLRWVEYNDLATLSRLEELDLSENLISVLEPNAFSSLLNLRVLRLRANQLKLVP
MGAFSRLSNLTTLDLSGNKLVILLDFTFQDLKNLRNLEVGDNDLVYISNKAFIGLVGLRE
LTIERCNLTSITGQSLSYLRSLVTLRLRYLSIASLEEQNFRKLGGLRGLEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLNLSYNPISVLESWALRDLVRLKE
LHLVGTNLILVQPYGLGGLQQIRLLNLSNNGLVTLEEGSFHSVNTLETLCVDGNPLSCDC
RLLWILQRRKTLNFDKKSPVCATPMELRGKALSTFSDSALFDHFICQRPKIRNRKLQQLT
AREGQVVSFVCRAEGDPTPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVSGLPLDGALAANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttgtccaagcctgagcttaccagggctgtttgtgctcctaatcgctgcatcc
ctaacacatggccaaacctgcccacagcgctgtgactgtatccctcatcagagagccgtg
atgtgccagaacaagcgtattggctctattcctggaggcatccctactgacacacggctg
ctggatctgagctgcaacagtttgcgctgggtggaatacaatgacttggcgactctgtcg
agacttgaggagctagacttgagcgagaatctcatcagtgtgttggagcctaatgctttc
tccagcttgcttaacctgagagtgttgcgtctgcgagccaaccagcttaaactcgtgccc
atgggtgccttttcacgtctcagcaacctcaccactctggacctaagtgggaataaactg
gtcatcctgttagacttcaccttccaggacttgaagaacctccgcaatttggaggtcggt
gataatgacctggtgtacatttcaaacaaggctttcataggattggtggggctccgggag
cttaccattgagaggtgcaatctgacctctataactggacagtctctttcctaccttcgc
agcttggtgacccttcgattacgctacctcagtatcgcttcattggaagagcagaacttc
cgcaaacttggtggactgcggggtcttgagattgaccactggccgttccttgagtacatc
tctcctcatagcttccaaggtctcaacctttcttggctctcgattaccaacaccaacatt
tccaccgtgcctacgggtgctcttcgcaacctaattcacttggctagcctcaatctgtct
tacaaccccatttcagttctcgagtcctgggccttgcgggatcttgtccgcttgaaggaa
ctgcacctagttggtacaaacctgatattagtacaaccgtacggtcttggaggcctgcaa
cagatacgattgctcaacttgtcaaacaatggattagtgaccctggaggaaggatccttc
cactcggtcaacacgctggagacgttgtgtgtagatggaaaccctttgtcctgtgattgc
cgcctactgtggatcctgcagcgccggaagaccctcaactttgacaaaaagtcacctgtt
tgcgccacacccatggaactgcgaggaaaagcactcagtaccttctcggactctgcactc
tttgaccatttcatctgtcagcggcctaaaattcgcaaccgcaaactgcagcagctgaca
gcacgtgaaggccaggtggtgtcatttgtatgtcgagcggaaggagacccaactccggtc
atcttttggatttcacctcagcgccgacgtatcaccaccaaaagtactgggcgagtgatt
gtcctacctgaaggtactctggagatccgttatgcccaggtaacagacagcgggacttat
atctgcattgcaagcaatgctggtggcaacgatacctactttgccaccctaacagtcagt
ggattgccattggatggtgctttggcagccaatcgcacctattatgtgggtgatcttaat
gacacgaatttaaacgacacacgtgtcttcctaaaattcacattggacctcaagaccatc
ctggtgtccacagcaatgggctgcatcatgtttttgggtgttgtgcttttctgtttcatt
ctcttgtttgtgtggagtcgagggcgaggtcagcataagaataatttctcagttgagtat
tcattcagaaaggtagatggtcccgctgccagcgggggtcaaggaggggcacgaaagttc
aacatgaagatgatataa
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