Cyprinus carpio (common carp): 109047021
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Entry
109047021 CDS
T05134
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109047021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109047021
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109047021
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
LIM_FHL2-3_N
PDZ_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
109047021
NCBI-ProteinID:
XP_042592758
UniProt:
A0A9Q9X035
LinkDB
All DBs
Position
B13:15591330..15637430
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AA seq
614 aa
AA seq
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MSSYNVSLAGPSPWGFRLQGGKDFNMPLTISRITPGSKAASSNLIQGDIIVAIDGVTTEG
MTHLEAQNKIKSANFNLALTMQRSKRPIPIPMTTPRIDSPMSVIPHQKDQPVQMNGALSV
SAETNSSYSSKHTNQSYSTVVSSSGEASLPAQRHLAAPRDKSSSGQKNQQYNSPIGLYSA
ETLQEMAMLQERVKSSGSGMPSGTPAEHAPVSTSIAPVCPPTIAASPNELLSEPQIASQA
PEPDAGQNPEQTMVTSFNLQASMGYSSQYKTSISSSYSQVPPMQQQPPPPMQHSSIQIPV
GTPPPKVVSTATIVPAAYTAAPAPAPQMVHKPAPPPHAPAAAPASSSNRPPWVTDENFAH
KFDPSKPTTTTTNIRVQPLPQAAPPPPLYIPNPVPAPVPVPAPAAPSPAFNPAPFPPVAR
GVAQRAERFAASNRTPLCGACNSIIRGPFLVALGRSWHPEEFNCHYCHTSLADVSFVEEQ
NNVYCENCYGEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDG
EPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKK
DKPLCKKHAHAINV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtacaacgtttcactcgctggaccttcgccttggggcttccggttgcaagga
ggcaaggacttcaacatgcccctcaccatttccaggattacaccaggaagcaaggcagcc
tccagcaacctgatccagggtgacatcatcgtggccattgatggggtcaccacagagggg
atgacacacctggaggcccaaaacaagatcaagtctgccaacttcaatctggcccttacc
atgcaaaggtcaaagcggcccattccaattcccatgacaacaccaaggattgactcccct
atgtctgtgatccctcatcagaaggatcagcctgtgcaaatgaatggggctctctcggtc
tctgctgagacaaactccagctactcaagcaagcacaccaaccagtcctatagcactgtg
gtgagcagtagcggagaagcttctttgcctgctcaaaggcatttagctgctccgagggac
aaatcctcctctgggcaaaaaaaccagcagtataactcccccatcggtctgtactctgca
gagacattacaagagatggccatgctgcaggagagggttaagagctcggggtcaggcatg
cctagtggtactcctgctgagcatgctccagtttccaccagtattgcacctgtctgtccg
cctactatcgctgcttcgcccaatgagctcctttcggagccacagatagccagtcaggca
cccgagcctgatgcagggcagaatcctgagcaaaccatggtaaccagcttcaacttgcag
gcctctatgggttacagttcccagtacaaaacctccatctccagttcttactcccaggtc
ccacctatgcagcagcagccaccaccacccatgcagcacagctccatccagatccccgta
ggtacacctccacctaaagtggtcagcactgccaccattgtgcccgcagcctacacagct
gccccagcaccagctcctcaaatggttcacaagcctgctccacctccacatgctcctgcc
gcagctccagcgtcttcttccaacaggcctccttgggttactgatgagaactttgcccat
aaatttgaccctagcaaacccaccaccaccaccacaaacatcagagtgcagcctcttccc
caggcagccccaccaccaccactctacatccccaaccccgtccctgctcccgttcccgtt
cctgctcctgctgcacccagccctgcattcaacccagcccccttcccacctgtggctcgt
ggagttgctcagagggcagagcggtttgcagccagcaacagaacacctctgtgtggagcc
tgcaacagcatcatcaggggaccattcctggtggcactgggtcgttcctggcatccagag
gagttcaactgccattattgccacacgtctctggccgatgtcagctttgtggaggagcag
aataatgtttactgtgaaaactgctatggagagttctttgcacctacatgtgcccgctgc
aacaccaagatcatgggagaagtgatgcatgcactgcggcagacctggcacaccacttgc
tttgtgtgtgcagcttgtggaaagccctttggaaacagcctcttccatatggaggatggt
gagccgtattgtgagaaagattatattgcactcttcagcacaaagtgccatggctgtgac
ttcccagttgaggcaggagacaaatttattgaagctcttggccacacatggcatgatacc
tgctttgtttgtgcggtgtgccatgtgaacctggaaggacaacctttctactccaagaag
gacaagccattatgcaagaagcatgcacatgccatcaatgtgtag
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