Cyprinus carpio (common carp): 109047026
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Entry
109047026 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p100 subunit-like
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109047026
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109047026
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
ARM_CUL7_CUL9
Motif
Other DBs
NCBI-GeneID:
109047026
NCBI-ProteinID:
XP_042592772
Ensembl:
ENSCCRG00000010500
ENSCCRG00000024679
UniProt:
A0A9Q9X045
LinkDB
All DBs
Position
B13:15708423..15732390
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AA seq
1667 aa
AA seq
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MSYKPKIHVFLGAPCPQALAIDTQERAAPPWKTMDFTWSQGRLIPKDTIREAETDECVTM
VSGRMQTAVESTEDKTETSQDDGTPSGSQCSQSKAESVEEEELCPVLVTEYLDSCFCSHR
QGRDGRPASPVSTETEYLSTWTKSQALLLRGRVAQCPTSDFPDDFLLGSPHTPPKQTPSS
SISSPELYSPVVSPEERGLGGTLQSSGEWHNESLSQRQQERGVILEITTDGILCSQGNAM
AEKPVDHEEAGLNIDSPSTIAQTSPSPTTSKRMKLSQTVSKTKETNQSARTTAAPLCGPT
TLLARCKTHGVRYAILVAVVHPCHLKEVKVKTGASAGTSVSLATLIVTDQSDVEMKVVLW
RTAAFWALTVFPGEILLITDVKVHIDKWKTETVLQSSFTSKLLNLGQVTRERIPPAPQNL
NCHTLRTLCTHLCEKRPLLVSLPPQKPQDLHSIPFIRLGALRPDTLVHALLRVKHWKLIT
VVVFCLVXGVLKAILNVEQGDGHQGAVILWGAALSWLQRLERKKDAVWEFRFLLVRQDVT
SGLLELHSTPWSSCQPLFPDDNRCKEFYNTGRSQRTASSFQIDLSTLLSQKYSGDVDLRV
KITAFQFQSSPSQEASLLIDGNTPLEKILDVVSGDIIFAGCGQCSAELETVENSIYRPWY
PCLPHTGVRRYYRPVVLTVRAGDDQICVQVPPALVQRILLNTPPDKLHKTIAPASEVRFI
QXSQRLIETIREXANITAVRVCTSFSRVASDDPAEHRMAGALRMDDTQYPMKFTEFMVDL
HYLHEPFEVKPEPFVPETVHGPYLQIIEEPKQRGFRFRYECEGPSHGGLPGASSERNRRT
YPTVKVSNYVGHARVEVQLVTHTDPPRVHAHSLVGRHCNDNGICIIDVGPNDLTAQFSNL
GILHVTKRGVVEVLTKRLKEEKRRIKEPGYKFTDSEEQAILQEARELGKSMDLNIVRLKF
TAYLQDSNGSFTRALKSVVSNPIYDSKSPNASNLKISRMDKTSGSVLGGEEVFLLCDKVQ
KDDIDIRFYEEEDDGGWEAFGDFSPTDVHKQYAIVFKTPPYRCTDITRPVTVFLQLKRKK
GGDCSEPKQFTYIPHNQDKEEVQRKRMKPLPQSYDNWRGGPQGGAGAFGGPGSGTGGGGG
MGGGFQFNPPIDGSAFFIGGCSGFSGGAQMSGSTPQAERSQNQSTNTQTQSGSQLQQHLF
QIDTALQSRASLMAKWSAHALLQYCRTGDVRLLLALQRHLCGVQDENGDTPLHLAIIHQQ
PVVVQQLIQALNNTPQQKFINKLNNLNQAPLHLAVITKQAKLVEMLMKMGADPSLLDQEG
RTPLHLAAHTGDEAILRVILGLLGERHSHLINSADFSGQYPVHLAVKKYGERCLQLLVEA
GAKISMPEQKSGCTPLHLAVRDNLLKLACYLITELKADVNACTYGGNSPLHFAASQGSPS
LCSMLIAAGADKRMENDEPLFLQSSSSSDEDDESEKNEVDRQLPYLMVQQVRCMSISSER
ETFNPRKRPAAGHTPFDLAKCQKVRDLLDGRKGPRPRSHAPKRTKISTEEVNPGLDSGVL
TKLCSILIEDHVPWRELAEKLGMLTLTNLYQDSALPCLKLLENYQLSGGPVDGLVEALQS
LGVSEGVRLLRDSQPKEDKQSTDSKEDSGFGSQSIEEGMGNRAVANH
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacaaaccaaagattcatgtttttttgggtgccccatgtccccaagcactcgct
atagacacacaggagagagcagctccaccctggaagacaatggacttcacttggagtcaa
ggcagattgattcccaaagacaccataagagaagcagaaaccgatgagtgtgttacgatg
gttagtggtagaatgcaaactgctgttgagagtacagaggacaaaacagaaacatcacag
gatgacggcactccatcaggcagccagtgctctcaatcaaaggcagagtccgttgaagaa
gaggaactgtgtcctgtattagtgacagaatacctagatagttgcttctgctcgcataga
caaggcagagatggaaggcctgcatcgcccgtttccacagagactgagtatctgagtaca
tggacaaagtcccaagccttgcttcttcgaggtagagtggcccaatgtccaacttctgac
tttcctgatgactttcttcttggttctccacacacccctcccaaacaaacgccctcatct
tctataagttccccagaattgtacagtcctgtggtcagccctgaagagaggggcttgggg
ggaaccttgcaaagctcaggagagtggcataatgagagtctaagccaaagacagcaggag
agaggggtgattctggaaatcacaactgacggcatcctctgctctcagggtaatgctatg
gctgaaaaacctgtggatcatgaggaagctggacttaatattgactcgccatctacaatt
gcacagacttcacctagtcccactacttctaaaaggatgaagttgtctcagactgtaagt
aaaactaaagaaacaaatcagagcgcaagaacaactgctgcccccctctgtggccctaca
accctgctggccaggtgtaagactcatggtgtacgatacgccatcttggttgctgtggtg
catccatgccacttaaaagaagtcaaagtgaaaactggagcttcggctggaaccagtgta
tctttagcaacactgattgttacagaccaatcagacgtggagatgaaggtggtgttatgg
aggacagcggctttctgggctctgacagtttttccaggagaaattctgctcattacagat
gtaaaagtgcacatagacaagtggaagactgagactgtcctgcagtcgtccttcaccagt
aagctgctaaatttgggacaggtcacaagggaacgtattccacctgccccacagaatttg
aactgtcatacattgagaacgctgtgcactcatctgtgtgagaagcgccccctcttggtg
tctctgcctcctcagaagcctcaggatttgcactccatccccttcatccgccttggagct
ttacgtcctgacacattggttcacgctctgcttagggttaaacactggaagttaatcaca
gtagtggtgttttgcttggtttgaggtgtactaaaagccattttgaatgtggagcaagga
gatggtcaccaaggtgctgtcatactttggggagctgctctctcttggctgcagcgtttg
gagaggaaaaaagatgctgtgtgggagttcaggtttctgctagtcagacaagatgtgact
tcaggtttgctagagctgcattctactccatggagcagctgtcagcctctctttcctgat
gacaatcgatgcaaggagttttacaacactggtcgctcacagaggactgctagcagcttc
cagattgatctcagcacactcctgtcccagaaatactcaggtgatgtggatctgagagtt
aaaatcacagcgttccagttccagagcagtccatcccaggaggcctcgctgttaatagat
ggcaacacgcccttggagaagatcctggatgtagtctctggtgacatcatctttgccggc
tgtggccagtgctctgcagaactggaaacagttgagaacagcatatacagaccctggtac
ccatgcctgccacacacaggagtgcgtcgctactataggccagttgttttaactgtgcga
gctggagatgatcaaatctgtgtgcaagttcctcctgctctggtgcagaggatcctccta
aacactcccccagataagctacataagaccatagccccagcatcagaggtgaggttcatt
cagtaaagtcaacgtctaatagaaactatacgagaataagcaaacatcacggctgtccga
gtgtgtacaagtttttccagagtcgcttcggatgaccctgcagagcacagaatggctgga
gcactaaggatggatgatacacagtatcccatgaagtttaccgagttcatggtggacctt
cattatctgcatgaaccttttgaggtgaagcctgaaccctttgtgccagagacagttcat
gggccttacctacagataattgaggagccaaagcagagaggattcagatttcgttatgaa
tgtgagggcccatcccacggtggtctgccaggggcctccagtgagaggaacagaaggacg
tatcccacagtcaaggtgtcaaactatgtgggtcacgctcgcgtagaggttcagcttgtg
acacacacagaccccccacgtgttcacgcgcacagccttgtgggtcgccattgtaatgac
aacgggatatgcatcattgatgtcgggcctaatgatctcacagcacaattcagtaattta
ggcatcctccatgtcactaagagaggagtggttgaagtattaacaaaaaggctgaaagaa
gagaagaggaggataaaagagcctggatataaatttactgattccgaggaacaggctatt
ttgcaagaggccagagaactaggcaaaagcatggacctaaacattgtgagattaaagttt
actgcttacttgcaggacagcaatgggagtttcacaagagccttgaagtcagttgtctcc
aaccctatctatgatagcaaatcaccaaatgcttcaaatctgaagatctcccgcatggac
aaaacatctggatcagtgctgggaggagaagaggtctttctgctctgtgataaagttcaa
aaagatgatattgacattcgtttttatgaggaggaagatgatggaggatgggaggcattt
ggagacttctcccctactgatgtccacaaacagtatgcgatcgtgtttaagaccccaccg
taccgctgcacagatatcacacgtcctgtcacagtcttcctgcagctcaagaggaagaag
ggaggcgactgcagcgaacccaaacagttcacgtatattccccacaatcaagacaaagaa
gaggttcagaggaagaggatgaagccacttcctcagtcctatgataactggcgcggagga
cctcaaggaggagcaggggcctttggaggtcctggatctggaacaggaggaggaggagga
atgggaggaggttttcaatttaatcctccgattgatggttcagcgtttttcattggtgga
tgtagtggatttagtggcggggcacagatgtcaggctccaccccacaagctgaaagatct
cagaatcagtcgacaaacacacaaactcagtctggctctcaattgcaacagcatctcttt
cagattgacacagctctgcagagtcgtgcctctttgatggcaaagtggtctgctcatgct
ttgttacagtactgcagaacaggggatgtgcgcctgctactggctctgcaaagacatctg
tgtggagtgcaagacgagaacggagacactcctctgcacttggccattatccatcagcaa
cctgttgtggtacagcagcttattcaggccctgaacaacactccacagcagaagtttatc
aacaagctcaacaacctcaatcaagctccattgcatctggctgtgatcacaaagcaggcc
aagttagttgagatgctgatgaaaatgggtgcagacccgagtctgctggaccaggagggc
aggacaccgcttcacttggccgctcacaccggtgatgaggccatactacgagtgatcctg
ggtctgctgggagagcgccattcccatttaataaactctgctgacttctcaggtcaatat
ccagtccatctcgcagtaaagaaatatggagagcgctgtcttcaattgttggtggaggca
ggagcaaagattagcatgccagagcagaaaagtggctgcacaccactacacctggcagtg
agggacaaccttttaaaactggcctgttatctcattaccgagctgaaggctgacgtgaat
gcgtgtacctacgggggcaacagtcctcttcactttgctgccagtcagggctccccatct
ctctgctccatgctgatagctgcaggtgctgataaacgcatggagaacgacgagcctctt
tttttgcagagctcgtcttcctcagatgaagatgacgagagcgagaagaatgaagtcgac
aggcagcttccatatctcatggttcagcaagttcgctgcatgtcaatatcatctgaaaga
gaaacctttaacccacgcaagagacctgctgcgggacacacaccatttgatctggccaaa
tgccaaaaggttagagatcttttagatggcaggaaaggccccaggcccaggtcacacgcc
cccaagaggaccaaaataagcactgaggaagtgaacccaggtttggacagtggggtgctc
acgaaactgtgtagtattctcattgaagaccacgtaccctggagagagctggcggaaaaa
ctgggcatgctcacactcactaacctgtaccaggatagtgccttaccctgccttaagctt
ctggagaactaccagctgagtggtggtcctgtggacggcctggtggaggcgctgcagtct
ctgggtgtgagtgaaggagtgaggctgctgagagacagccaacccaaagaggacaagcag
agcacagattctaaagaggacagcggctttgggagtcagtctattgaagaggggatggga
aatcgtgcagtggccaatcactga
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