Cyprinus carpio (common carp): 109047399
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Entry
109047399 CDS
T05134
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04110
Cell cycle
ccar04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109047399
04114 Oocyte meiosis
109047399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109047399
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccar00535
]
109047399
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109047399
Meiosis-specific proteins
Cohesin complex and associated proteins
109047399
Proteoglycans [BR:
ccar00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
109047399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
109047399
NCBI-ProteinID:
XP_042567966
Ensembl:
ENSCCRG00000016364
LinkDB
All DBs
Position
A22:complement(15517026..15538316)
Genome browser
AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEDTERVVRELKARISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNAVKEREER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKERNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREELEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIIMNNF
DCEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIEHINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRIKDTLARSEDLDSLIDKTEVEIKDHQKS
MERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGADSERGS
SSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
SAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggttattattcaggggtttcgcagctacagagaccagactgtggtt
gatcccttcagctccaaacacaatgttatagttggaagaaatggatcgggaaagagtaac
ttcttctatgccatacagtttgtactcagtgatgagttcagtcatcttcgtccagagcag
cgtctggctctgcttcacgaaggcactggtcctcgagtcatttcagcctttgtggaaatt
atattcgacaactctgacaacaggctgccgattgataaagaggaggtgtctctgcgccgt
gtcatcggagcaaagaaagatcagtacttcttagacaaaaagatggtcactaagaacgat
gtgatgaacctgttggagagtgctggtttctcccgcagcaacccttactacatcgtcaag
caggggaagatcaatcagatggcaactgcgcctgactctcagcgtctcaaactgctccga
gaggtggccggcaccagagtctacgatgagcgcaaagaggagagtatctctctcatgaag
gaaacagagggcaagcgagagaagattaatgagctgctaaagtacatcgaggaacgtctg
cacactctggaggatgagaaggaggaactggctcagtaccagaagtgggacaaaatgaga
agagctctggagtacaccatctacaaccaggagctcaacgagacccgggccaaattggac
gagttgtccagtaaaagagagacctgtggagacaaatctagacaactgcgagatgctcaa
caagatgctcgagacaaagtggaggacacggagcgtgtggtgagggagctgaaggctcga
atctccgccatgaaggaggagaaagaacagctgagcgccgagcgacaggagcagatcaaa
cagaggaccaaactggagctcaaagccaaagatctgcaggacgagctggcaggaaacagc
gaacagaggaaacggctgctcaaagagcgccagaagcttctggagaagattgaagaaaaa
cagaaggagctacaggaaacagaacccaaatttaatgctgtgaaagaaagagaggagcga
gggatttctcgactggctcaagccacacaagagcgaacagatctgtatgccaaacagggc
agaggcagtcagttcacctctaaagaagagagggacaaatggatcaagaaagagctgaag
tctctggatcaagccatcaatgacaagaaacggcagatcgctgccatccacaaagatctg
gaggacaccgaagccaataaagagagaaacctggaacagtacagtaaactggaccaggac
ttgaatgaagtgaagactcgagtggaggagctggataagaagtactatgaggtgaagaac
cgaaaggatgaacttcagagcgagagaaactacctgtggagggaggagaacgcagagcag
caggcgctggcagccaagcgagaagagctggagaagaaacaacagctactgcgagcagcc
accggaaaggctattttgaatggcatcgacagcattaataaagtattggaacatttccgc
cggaagggcattaaccagcatgtcatcaacggttaccacggcatcatcatgaataacttt
gattgtgaacctgctttctacacctgtgtggaggtgaccgctggcaccaggctgttttac
cacatcgtggaaacagatgaagtgagcaccaagattctgatggagtttaataagatgaac
ttgcctggagaggttaccttcctgcccctcagcaaactagacgtcagggacactgcttac
cctgagactaatgatgcaatccccatgatcagcaagctccgttacagtccaaacttcgac
aaggctttcaaacacgtgtttgggaagacgctgatctgccgcagcatggaagtgtccact
cagctggctcgagctttcaccatggactgcatcacactggagggtgatcaggtgagtcat
cgtggcgctctgaccggtggctactacgacacacgcaagtcccgtctggagctgcagaag
gacatgaggaaggccgaggaggagcttggagaactggaggccaaactcaatgagaacctg
cgtagaaatattgaacatatcaataacgaaattgaccagctgatgaatcagatgcagcaa
attgagacccagcagaggaagttcaaggcatccagagacagtatactgtctgagatgaag
atgctaaaggagaagagacagcagtcagagaaaacatttatgcccaagcaacgcagtctt
cagagtctggaggccagtctgcatgccatggagagcacacgggagtctctgaaggcagag
ctgggaacggacctgctctctcagctcagtttagaagaccaacgcagggtggacgacctc
aacgatgagatcagacagctgcaacaggacaacagacagctgctgaatgagagaattaag
ctggagggaatcatgaccagggtggagacgtacctcaacgagaacctgcgcaaacgtctc
gaccaagtcgagcaggaattgaatgaactgagagaaaccgaaggaggaaccgtcctcact
gccacaacatcagaactggatggcattaataaacgcataaaagacactttggctcgatct
gaggatttggactccctcatcgataagactgaggtggaaataaaggaccaccagaagagt
atggagcgctggaagaacatcgagaaggagcagaacgaagccatcaatcacgacacaaag
gagctggagaagatgaccaacagacaggggatgttactgaagaagaaagaggaatgcatg
aagaagattcgcgagctgggctccctgccgcaggaggcctttgaaaagtaccagacgctc
acgcttaaacagttgttcaggaagctggagcaatgtaacacagagctgaaaaagtacagc
catgtgaataaaaaagccctggaccagttcgtcaatttctcagagcagaaagagaagttg
ataaagaggcaggaggagctggatagaggctacaaatccatcatggagctcatgaatgtc
ctggagctgcgcaaatacgaggccatccagctcaccttcaaacaggtgtctaagaatttc
agcgaggtgtttcagaagctggtgcctggtggtaaagcaactctggtgatgaagaaggga
gacactgaaggtggacagtctcaggacgagggcgagggagcggacagtgagaggggatct
tcctcccagagcagcgttcccagtgtagaccagttcactggagtgggcatcagggtgtcg
ttcaccggtaaacagggagagatgagggagatgcagcagctttctggaggtcagaagtct
ctggtggctctggctctcatctttgccatccagaaatgtgaccctgctcctttctacctg
tttgatgaaatcgaccaggctctagacgcccagcacagaaaagcagtgtcagacatgatc
gtggagctggctggacatgctcagttcatcaccaccaccttcagacccgagctgctggag
tcagctgacaagttctatggcgtcaaattcagaaacaaggtgagtcacatcgatgtgatc
tcagcagagcaggcgaaggactttgtggaggatgacaccactcacggctaa
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integrated database retrieval system
