Cyprinus carpio (common carp): 109047428
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Entry
109047428 CDS
T05134
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109047428 (rnf13)
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109047428 (rnf13)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109047428 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
zf_RING_Vps8_fungal
DUF7027
FeoB_associated
zf-RING_4
PHDvar_NSD
RINGv
PHD
zf-RING-like
CxC1
Hemotin
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
109047428
NCBI-ProteinID:
XP_042605143
Ensembl:
ENSCCRG00000019102
UniProt:
A0A8C1JWJ1
LinkDB
All DBs
Position
B22:complement(34139007..34159507)
Genome browser
AA seq
377 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYSFDNKTENFDDLPSRFGYRLP
SEGLKGFLIGARPENACVPIDPPPLRDNHSSAFIVLIKRFECNFDIKVLHAQKAGYKAAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFIGEETANSLKEDYIYEKGGHVILLPDFSLPL
EYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKFKKGDSYDVC
AICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSDGDSESESESGD
SGGEENEVSENTPLLRSLASTSAHSFGTMSGSLSHHDAESSDYDERSDTTDSEEEVTVET
VVVQLQQGRPDNMEASA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctctttggggatgctgatgctctcggccacacagatttacaccattttcacg
gttcagctattcgccttcctcaatctgctgcccgtggaggccgacatatcagcttattcg
tttgacaacaaaacagagaactttgatgacttgccttctcgattcggctacaggctgccc
agtgaaggactaaagggtttcctgatcggagcgcgtccggagaacgcctgtgtcccgatc
gacccccctcccctgcgggacaaccacagcagcgccttcatcgtgctgatcaagcgcttc
gaatgtaactttgacatcaaggtcctccatgcgcagaaggccggctacaaggcggcgatt
gtccacaatgtggactccgatgacttaatcagcatgggatccaatgatctggatattctg
aagcagatagacattccttcagtgtttatcggtgaagaaacggccaactctctcaaagag
gattacatctatgagaaaggtggtcatgtgattctcctgccggacttcagtttgcctctg
gaatattatctgatcccattcctcatcattgttggaatctgcctcatcctcattgtagtt
ttcatgatcacaaagtttgtacaggacagacatagagccaggagaagtcgcttacgcaag
gaccagctgaagaaactcccaattcacaagtttaagaaaggtgattcgtatgacgtgtgt
gccatttgtttggatgagtatgaggagggcgacaagctgcgggtccttccctgctcacac
gcctatcacagcaagtgtgtcgacccatggctgaccaaaaccaagaagacctgccccgtg
tgcaagcagaaggtggtgccgtctgacggcgactccgagtccgagtccgagtcgggcgac
agcggcggagaggagaacgaagtgtcggaaaacacgcccctgctgcgatctctggcctcc
accagcgcgcattccttcggcaccatgtccggctcgctgtcccatcacgacgccgagtcc
tcggactacgacgagcgcagcgacacgaccgacagcgaggaggaggttaccgtggagact
gtggtcgtacagctgcagcagggccgtcccgacaacatggaggccagcgcttga
DBGET
integrated database retrieval system
