Cyprinus carpio (common carp): 109047431
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Entry
109047431 CDS
T05134
Name
(RefSeq) histone-binding protein RBBP7-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
ccar03083
Polycomb repressive complex
ccar04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109047431
03083 Polycomb repressive complex
109047431
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
109047431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109047431
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109047431
Histone modification proteins
HAT complexes
HATB complex
109047431
HDAC complexes
Sin3A-HDAC complex
109047431
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109047431
PRC2.2
109047431
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109047431
Heterochromatin formation proteins
Other heterochromatin formation proteins
109047431
Chromatin remodeling factors
NuRD complex
109047431
NuRF complex
109047431
NuRF complex (fruit fly)
109047431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
CAF1C_H4-bd
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
EIF3I
DSE1_N
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_DCAF12
eIF2A
WD40_MABP1-WDR62_1st
ASA1
ANAPC4_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_1st
PAC11
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_DCAF4
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
109047431
NCBI-ProteinID:
XP_042590458
Ensembl:
ENSCCRG00000008449
ENSCCRG00000011901
UniProt:
A0A8C1JLI0
LinkDB
All DBs
Position
B11:complement(21112469..21120420)
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
VVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNANLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNSYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNDPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagaagtgtacgacgatgcagtggaggagagagtaataaatgaggaatac
aagatctggaagaaaaacacaccgttcctgtatgatctagtcatgacacatgcactcgag
tggccgagtttgacggtgcagtggcttcctgatgtgaacaggcctgagggaaaggactac
gtggttcatcggctggtgttgggcacacatacttcggatgagcagaaccacttggttatc
gccagtgttcagatccctaatgatgatgcccagtttgatgcgtcccactacgacagtgag
aaaggagcagagtttggagggtttgggtcggtgagcggaaagatcgagattgaaattaag
atcaaccatgaaggagaagtgaaccgagccagatacatgccacaaaacccctgcatcatc
gccaccaagacccccacttctgacgtgctggtgtttgactacaccaaacacccatccaag
ccagaccccagtggagagtgtagtccagacctgagactgcgggggcatcagaaggaggga
tacggtttgtcctggaacgccaacctgagtggaaacctgcttagtgcgtcggacgaccat
acgatctgtctgtgggacatcagcgctgttcctaaggaggggaagatagtagatgccaag
accatcttcacagggcacacagctgtggtggaggacgtgtcctggcaccttctacatgaa
tcactgttcggctctgtggctgatgaccagaaactcatgatctgggacacgcgatctaat
aacacctcaaagccaagtcatgccgtggatgcccacacggctgaagtcaactgcctgtcc
ttcaactcctacagcgagttcattctggccactggctcggcagacaagactgttgcattg
tgggatctgcgtaacctgaagctgaagcttcactcttttgagtcacacaaggatgaaatc
ttccaggtccagtggtctccccataacgagaccatcctggcttccagtggcacggacaga
cgcctcaatgtttgggatcttagtaaaatcggagaagagcagtctgcggaggatgcagag
gacgggccacccgagctgctgttcattcatggtgggcacacagctaagatctctgatttc
tcctggaacccaaatgacccttgggtaatctgttctgtgtcagaggacaacatcatgcaa
gtatggcagatggctgagaacatctacaatgatgaagagccggacacccctgcgtcagag
ctggaagggcaggcatcgtaa
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