Cyprinus carpio (common carp): 109047606
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Entry
109047606 CDS
T05134
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109047606
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_13
LRR_9
LRR_NLRC4
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
109047606
NCBI-ProteinID:
XP_042605865
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Position
B22
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AA seq
561 aa
AA seq
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MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDTSGASPAVAFTLDSTIKRPNPPPST
RKKSSNAEVSKELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPAE
VGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVISLTTLYLRF
NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRSLSKCRELEEINLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPAGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEVLILSNNLLKKLP
HGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtactctgggcaaagataaagactctaaggagagggaacccaaagccgaaggg
aaatccaaaaccaaagggaaagatgccaaagacgggaagaaagacacgagtggcgcttcg
cccgcggtggccttcaccttggacagcacgataaagcgacccaacccgccgcctagtacg
cgcaaaaaatccagcaacgcggaagtcagcaaggaactgaacaagtgccgtgaggagaac
tcgatgcgcctggacctgtccaagagatccatccatctgttgccctcttccatcaaggag
ctgacccagctgaccgagctctacctgtacagcaacaagctgcaaagcctgccggctgag
gtgggatgcctgtcaggactggtgacgctggcgctcagcgagaactctctcaccagcctg
ccagactcgctggacaacctgaagaagctgcgtatgctcgacctgcggcacaacaagctt
cgggagatcccagccgtggtctaccgcgtcatctccctcaccacgctctacctgcgcttt
aatcggatcaccaccgtggagaaggacatcaagaatctgtccaaactcaccatgctcagc
atccgagagaacaagattaaacagctgcccgcagagatcggtgagctctgtaatttgatt
acgctggatgtagcccacaaccagctggagcaccttcctaaagagatcggcaattgcact
cagatcaccaaccttgacctgcagcacaacgaacttctcgacctccctgagactataggt
aacttgtcgagtataaaccgtctgggtctgaggtacaaccgtctatcagcgatccctcga
tctttatcgaagtgccgagagctggaggaaatcaaccttgaaaacaacaatatctcagtg
ttaccagagggtcttctctccagtctggtgaacctgacgagtctgacgctggcgcgaaac
tgcttccagtcttacccagcgggcggcccatcccagttctccaccatctactcactcaac
atggagcacaaccgtatcaacaagatcccttttggcatcttctcccgagccaaagtgctc
agcaaactcaatatgaaggacaaccagttaacgtctcttccgctggattttgggacgtgg
accagtatggtagagctgaacctggcaacaaaccagcttaccaagattcccgaggatatc
tgtggacttgtgtctttagaggtcctcatattgtctaacaatcttttgaagaagttgcct
catgggataggaaacttacggaaactgcgggagcttgacctggaggagaacaaactggag
tccctccccaatgagattgcctaccttaaagatcttcagaaacttgtgttgaccaataat
cagctgaccactttgccgagaggaattggtcacctgaccaacctgacgtacctgggcttg
ggagagaacctgctgcagcacctacctgaggagatcggtacactggagaacctggaggac
ctgtacctgaacgacaaccctaacctgcacagtctgccgttcgagctggcgctctgcagt
aagctgtccatcatgagcatagagaactgtcccctcagccacctcccgccgcagatcgtc
gccggaggcccgtcctttatcatccagttcctcaagatgcagggtccctaccgcgccatg
gtctga
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