Cyprinus carpio (common carp): 109047774
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Entry
109047774 CDS
T05134
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccar03016
]
109047774 (trmt13)
Enzymes [BR:
ccar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
109047774 (trmt13)
Transfer RNA biogenesis [BR:
ccar03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109047774 (trmt13)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Drf_GBD
Motif
Other DBs
NCBI-GeneID:
109047774
NCBI-ProteinID:
XP_042568361
Ensembl:
ENSCCRG00000010354
UniProt:
A0A8C1AIC3
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All DBs
Position
A22:complement(8197936..8201260)
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AA seq
472 aa
AA seq
DB search
MEGFVADGVSAPLAGRCAFYVAKKKRYCKMIVGSGKTFCGEHANAGEEESEKKRIPCPLD
PKHTVFEDNLAKHLKKCNSKEKPKPIYYVKDINAGSANEDEPIEEITIAERSKEELEKLI
VKLKTALKGVNTKLVENILSHSALHEPLSDPKNGDSAFKHLRQQASILGNMEVLELLSPN
RCYIEFGAGKGKLSHWIHIALKAAENVNFLLVERSSTRFKVDGKHKNAGSTFDRLQVDIQ
HLDLSKVPLLRKEGLSIIGVGKHLCGAATDLALRCLFEHNCTDKDDEPPTKRAKLHQNEG
AGDFIKPVPSTEGRETGERLIVSGVAIALCCHHRCDWRHYVGKEFFRQRGLGPEEFAAFQ
RMSSWATCGMRKIGSQTTEKRSEHKTGEEEEHEMCEEALPDPLKGLMSVEDREQIGRLCK
RLIDHGRVYYLQQKGFETSLKYYTSRDISLENVLLTAVPAANQNRDESQQPS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttcgtagcagacggcgtgtcagcgcctttagctggaagatgtgctttttat
gtagcaaaaaagaaacgatactgcaagatgattgttggaagtgggaaaaccttctgcggg
gaacatgcaaatgctggtgaagaagagagtgagaaaaaacgaataccctgtcctctggac
cccaaacacactgtatttgaagataatttggctaaacacctgaagaaatgcaattctaag
gagaaaccaaaacctatttattatgtgaaggatatcaatgcaggttctgcaaatgaagac
gaaccaatagaggagataaccatcgctgaacgatccaaagaggaactggaaaagttgatt
gtgaaactcaaaactgcactgaaaggagtaaataccaaactggttgaaaatatactctca
cattctgctctacatgagcctctaagtgacccaaagaatggagattctgcctttaaacac
ctcagacaacaggcttcaattcttggaaacatggaggttttagaactgctcagcccaaac
agatgctacatagagtttggagcagggaagggaaaactctcccactggattcacatcgct
cttaaagcagctgaaaatgtcaattttttacttgtggaaaggtccagtactcgctttaag
gtagatggcaagcacaaaaatgcaggctcgacgtttgataggcttcaggttgatattcag
caccttgatttatcaaaggtccctcttctgagaaaagaaggactttctattattggtgtt
gggaagcacctgtgtggtgcagcaacagatctggcccttcggtgtttatttgagcacaac
tgcaccgacaaagatgatgaacctccaacaaagcgcgcaaaactccatcagaatgagggt
gctggtgattttattaagcctgttccctctaccgaaggcagggaaactggtgaaaggctc
atagtgtcaggagtggccattgctctttgctgccaccaccgttgcgactggagacactac
gtgggaaaagagttcttcaggcagagaggtcttggaccggaagagttcgctgcctttcag
cgcatgtcgagctgggccacttgtgggatgagaaaaattggctctcagacaacagaaaaa
cgaagtgaacataaaacaggggaagaggaagaacatgagatgtgcgaggaagctttacca
gatcccctcaaaggtctgatgtcagttgaagatcgggaacaaatcggacggctttgtaag
cgtctgattgaccatggcagagtgtattaccttcagcaaaaaggctttgaaaccagcctg
aagtactacacaagcagagacatttcattggagaatgtgttactaactgccgttcccgca
gccaatcagaacagagatgaatctcaacagccttcttaa
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