Cyprinus carpio (common carp): 109047828
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Entry
109047828 CDS
T05134
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109047828
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109047828
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109047828
NCBI-ProteinID:
XP_042605735
UniProt:
A0A9Q9XQG5
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All DBs
Position
B22:complement(32839717..32841130)
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AA seq
315 aa
AA seq
DB search
MYSMMETELKPPASQPNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQPMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRAGQCQTGDLRDMISMYLPGAEVQDQSAQSRLHMSQHYQSAP
VPGTTINGTIPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaaaccgagctgaaacccccggcgtctcagccgaacacggggggc
acggggaacaccaactcttcgggaaacaaccagaaaaacagcccggaccgggtcaagaga
cccatgaacgccttcatggtgtggtcgcggggccagaggaggaaaatggcacaggagaac
cccaaaatgcacaattcggaaataagcaagcgactcggggccgagtggaaacttctgtcc
gagagcgagaagcggccgttcatcgacgaagccaagcgcctcagggctctccacatgaag
gaacacccggattacaaatacagaccccgaaggaaaaccaagaccctcatgaagaaggac
aagtacaccctgccgggcgggcttctggcgccgggcggcaacggcatgggcgccggtgtg
ggtgtaggggccggtttgggcgctggggtcaaccagaggatggacagttatgcacacatg
aacggctggaccaacggaggctacggcatgatgcaggagcagctgggttacccgcagcac
ccgggactgaacgcgcacaacacggcgcagatgcagcccatgcaccgctacgacatgagc
gcgctccagtacaactccatgaccaactcgcagacctacatgaacggatcgcccacctac
agcatgtcctattcgcagcaaagcacgccggggatgacgctgggctccatgggctcggtg
gtcaagtccgagtccagctcgagtccaccggtggtcacgtcgtcctctcactcccgggcc
ggacagtgtcaaacgggggacctgcgggacatgatcagtatgtacctgcctggcgcggag
gtccaggatcagagtgcccagagcagactgcacatgtcccaacactaccagagtgcacct
gtgcccggcacgacgattaacggcacgatccccttatcgcatatgtaa
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