Cyprinus carpio (common carp): 109047829
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Entry
109047829 CDS
T05134
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109047829
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109047829
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109047829
NCBI-ProteinID:
XP_018921044
UniProt:
A0A8C1NWU7
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All DBs
Position
A22:complement(19421219..19422778)
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPPASQPNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQPMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRAGQCQTGDLRDMISMYLPGAEVQDQSAQSRLHMSQHYQSAP
VPGTTINGTIPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaaacccccggcgtctcagccgaacacggggggc
acggggaacaccaactcttcaggaaacaatcagaaaaacagcccggaccgggtcaagaga
cccatgaacgccttcatggtgtggtcgcggggccagaggaggaaaatggcacaggagaac
cccaaaatgcacaattcggaaataagcaagcgactcggggccgagtggaaacttctgtcc
gagagcgagaagcggccgttcatcgacgaagccaagcgccttcgggctctccacatgaag
gaacacccggattacaaatacagaccccgcaggaaaaccaagaccctcatgaagaaggac
aagtacaccctgccgggcgggcttctggcgccggggggcaacggcatgggcgccggtgtg
ggtgtaggggccggtttgggcgctggggtcaaccagaggatggacagttatgcccatatg
aacggatggaccaacggaggctacggcatgatgcaggagcagctgggttacccgcagcac
ccgggactgaacgcgcacaacacggcgcagatgcagcccatgcaccgctacgacatgagc
gcgctccagtacaactccatgaccaactcgcagacctacatgaacggatcgcccacctac
agcatgtcctattcgcagcaaagcacgccgggaatgacgctgggctccatgggctcggtg
gtcaagtctgagtccagttcgagtccgccggtggtcacgtcgtcctctcactcccgggcc
ggacagtgtcaaacgggggacctgcgggacatgatcagtatgtacctgcctggcgcggag
gtccaggatcagagtgcccagagcagactgcacatgtcccaacactaccagagcgcacct
gtgcccggcacgacgattaacggcacaatccccttatcgcatatgtaa
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