Cyprinus carpio (common carp): 109048374
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Entry
109048374 CDS
T05134
Name
(RefSeq) neuronal PAS domain-containing protein 3-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109048374
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109048374
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS_9
PAS
PAS_4
Motif
Other DBs
NCBI-GeneID:
109048374
NCBI-ProteinID:
XP_042629516
UniProt:
A0A9Q9Z165
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All DBs
Position
A17:3783996..4064666
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AA seq
978 aa
AA seq
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MIRIFPDFSVQVTAAAAAGAGAGGGMPAASRVPGATNGNPQNLQGLTSYQQSEPYWERSA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSAVA
TDIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESNSPSLLSPDNILER
SFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQIMGMVVMAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNGNEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPGKASESSETSDSESDSKENSEDNENSKSDGKGNQSSENSEDPESDSKKQ
MGQPPEQEMRRQEEGDSSSNPESQDSDDSLEPSDCETDNKEGRLGGLHIKVEHYGDGEVE
ELQDSPSSFSSSEEEEDEVEDIVKDCNSGGELSGPAMSKHQKRKKRRKKQKWDGSRQRLC
LSPSAAATPSPGSLDPTLGDQPPLLLPPSPTSSSVLKIKTEMSEPINFDNDSSIWNYPPN
REISCNESPYSMTKPHNTFPSPPPAGLQVSIPDSVLTPPGAEGGGGSRKPNFNGNSSSGN
NNSAPTSVSSATLGSLVPPSSSTTADPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEALQ
RLQAGNVVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNILPNAHTAVNF
VDGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGAVSGAGLTQMPAANVFTTAEGLFSTLPF
PVYSNGIHNTQTLERKED
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcggcggcggctgcaggtgcg
ggagccggtggaggaatgccggctgcgtccagagtcccgggagctactaacgggaacccg
caaaacctccaaggcttgacgtcttaccaacaaagcgagccatactgggagaggtctgct
aatgcaagctcctgctccgccactaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaggctctgaggaaggagaagtcacgtgacgccgctcgctcg
cgccgggggaaggaaaacttcgagttctatgagctggcaaagatgcttccgctccccggt
gccatcaccagccagctggacaaggcctccatcatccgcctcaccatcagctaccttaag
atgagggacttcgccaaccagggagacccgccgtggaacctgcgcatcgaaggaccgccg
cccaacacctcagtcaaagctatcggctcccagcggaggcggagccccagcgctgttgcc
acggacatctttgagcctcaccttggcagccacatcctgcagtccctggatggatttgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagacagtgtccatatatctg
gggctttcacaggtagagctgacgggcagcagtgtgtttgattacgttcacccgggcgat
catgtggagatggccgagcagctgggcatgaagcttccgccgggcagagggctgctgtct
cagggcggcggggccgaggacggggccagctctgcctcttcttcctctcactctgagaca
cctgagccagtggagtcgaacagccctagtcttctgtcaccggataacattctagaacgc
tccttcttcattcgtatgaagtccacgctcaccaagagaggcgtccacatcaagtcctct
ggatacaaggttatccacattaccggcaggctgcggataagaatggcattaacacacagt
cgttcggtacccaatcaaatcatgggcatggttgtgatggcacacgcacttcctccgcca
accatcaatgaggtccggattgactgccagatgtttgttacacgggtcaacatggatctc
aacattgtttactgtgaaaacagaatcagtgactacatggacctgacacctgtcgacatc
gtagggaagagatgttatcacttcattcacgcagaggacgtggaaggcattcggcaaagc
catttagacctgatgaataaaggtcagtgtgtgacaaaatattaccgctggattcagaag
aatggaggttatatctggatccagtccagtgccactattgcaatcaacgccaagaatggc
aacgaaaaaaacatcatctgggtcaactatgtactcagtaatccagagtacaaagataca
cccatggatattgcacagctgcctaacctgccagggaaagcatcagagtcctcagaaaca
tctgattctgaatccgactccaaggagaactctgaggacaatgaaaactccaagtcagat
ggaaaagggaatcagtcttctgagaacagtgaagatccagagtcggacagtaagaaacag
atgggccagccgccagagcaagaaatgagacgacaggaggaaggagacagttccagcaat
ccagaaagtcaggacagtgatgatagtctggaaccttctgactgtgaaaccgacaacaag
gagggccgcctagggggtttacacataaaggtggagcattatggtgatggtgaggtggag
gaactacaggactcgccctcctctttctcctcctcagaagaagaggaggatgaggtggaa
gatattgtgaaggactgcaacagtggaggagagctgagcggaccagcaatgagtaaacac
cagaagagaaagaagaggagaaaaaaacagaaatgggatggaagtcgacaacgtctctgt
ctgtctccctcggctgctgctacccccagccctggcagcctggaccccacccttggtgac
cagcctcccctcctgcttccaccctccccaaccagttcctctgtgctgaagatcaagact
gagatgtcagaacctataaacttcgacaacgacagcagcatctggaactacccacccaac
cgagagatctcctgcaacgagtctccctacagcatgacaaaaccccacaacaccttccct
tctcccccgcctgccggcctgcaggtgtccatccccgactcagtcctcactccacctggt
gccgagggtggaggaggcagcagaaagcccaatttcaatggcaacagtagcagtggcaac
aataacagtgcccccacctctgtgtccagcgcaactctgggcagcttggttcctccttcc
agttccactactgctgacccgctttccccacctttgtcagcctcgccacgggataagcag
cagggtacacccacctcctccggttccctgctctataccagtgatctggaagccctgcag
aggttacaagcagggaatgtggtacttccattggtgcacagagtcacaggcacgcttgct
gccaccagcacagcttccccgcgagtctacaccactggaacgatccgatatgccccagca
gacgtcagcctggccatgcagggcaacatcctgcctaatgctcacaccgctgtgaacttc
gtagatgggcccggctttggcatagaccctaagacacccatggagatgttgtaccatcat
gtgcaccggctcaacatgtccaccccctttgggggtgcggtcagcggagccgggctcaca
cagatgccagctgcaaatgtcttcaccacagcagagggacttttctccacgcttccgttt
cccgtctacagcaacggcatccacaacacacagactctggagcgcaaggaggattaa
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