Cyprinus carpio (common carp): 109048729
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Entry
109048729 CDS
T05134
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109048729
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109048729
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109048729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109048729
NCBI-ProteinID:
XP_042606094
Ensembl:
ENSCCRG00000012702
UniProt:
A0A9Q9XQF0
LinkDB
All DBs
Position
B23:9103570..9126916
Genome browser
AA seq
1022 aa
AA seq
DB search
MGFDLDRFEGPVDPDLICKLCGKVLEDPLSTPCGHVFCAACALQWLSKVSSCPVQCQKIT
SKELNHVLPLNIILKLDIKCDHRERGCNRVMKLQHLPEHAETCEFSPVRCGNEGCDAVLS
LKDVASHMREGCERRAVDVCKDGCGLALTLKEKSEDHSCLQALKTHSGLLQAKVLSLEKE
LKRRSLSFSKRERSLLSKLSALHCELHITALTFQKKITEYKSRIDSLSNSWMPLEKGEET
RSLKVTLHRTSSGSLGFSIIGGRLCGETEQHGDFSDGIYVSKIVENGAADKAGLHVHDRI
IEVNGRSMSVATHDQAVEAFQTAKNPIEVQVLRRTAHKTCKTLNPAQGMDNSTQTNITLK
TSKHIETLAKIPSPPCMALPHSFHSPSQYQMARRDSPCPSDFHDGVQKDSESRGLEYEEV
DLQRNTTQDKLGLKLCYKTDDEKSAIYISEIDPEGIAAKDGRVQEGDWIIQINGRDIQSH
EEAVTLLTKVESKNVTLLVARLESQDVGWLEDRNNLDDLHMGTLEQQHHKVKEFTTSMLQ
QSTNEEDGGTTDTATLLSNQHEKDSGVGRTDESTRNDESSEQDILGDDQNSLCDTLPESH
KKYNYNQETVESGDMHLSNDSFLSADNGDGEIFLGIPGMACEHFQKLLELKSLVNGNNLQ
GLLDDDQEIQMLNEELLSIELECLSIIQAHRLQAEGGDQQAKKPSAKHFFEQVDQDLINN
QVDNEGSTSAYNTGESCLSLHPTLEPDSLESQRMVAGDKGKGSPMHRRNSTTACSKHNLS
PIQEISPTKSLPGDPEVTNQGKRKSKKKNPRRSLLTSLHHSSYKNTYIPAHAQHYQSYMQ
LIQQKSAVEYAQSQASLASLCKNAETTLTQSRPKTGWKVKIRSDGTRYITKRPIRDQLLK
ERALRIREERCSVTTDDDAASELKLGRYWNKEERKQHAARAKEQRQRRELMKQCCIQSKE
QAGALDDKKEPDIIQLSRKKMMKRRNKRIFDNWMTIQELLTHGTMSTDGTRLYNSFLSVT
TV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgacctagaccgtttcgaaggtcctgtggatccggacctaatctgtaaactg
tgtgggaaagttttagaggatcctctcagcactccgtgcggacatgtcttctgcgccgcc
tgcgcgctccagtggctctccaaagtcagcagctgccctgtccagtgccagaagatcacc
agcaaagagctgaaccacgtcctgcccctaaacataattctcaagctggacatcaaatgc
gaccaccgtgaacgaggctgcaaccgggtgatgaagctccagcatctgccagagcacgcg
gagacctgcgaattctctccggtgagatgcgggaatgaaggatgcgacgcggtgctcagc
ttgaaggatgtggcttcgcacatgcgggagggatgcgagcgcagggccgtggatgtctgt
aaggatggatgtggactcgcgctgaccctcaaggagaagtccgaggatcacagctgtctc
caagctctcaagacacacagcggtctcctccaagccaaagtgttgagtctggagaaggag
ctgaagcgccggtcgctgagcttcagtaagagggagagatctctcctctccaaactctcc
gcgctccactgcgagctgcacatcacagcgctcacgtttcagaagaaaatcaccgagtac
aagagcaggattgactcgctgtcaaacagctggatgcctctcgagaagggtgaagaaaca
aggagcctcaaagtcaccctccacagaacatcatcaggatctcttggattcagtatcatt
ggaggaagattgtgtggggaaacagagcagcatggggatttcagtgatggcatctatgta
tccaagatagttgaaaacggagcagctgacaaggctggactgcatgttcatgacaggatc
attgaggtaaatggaagaagcatgtctgttgccacccatgatcaagcagtagaggctttc
caaactgccaaaaaccctattgaggttcaggtactgcgcaggacagcacacaagacttgc
aagactcttaatccagcccagggaatggacaacagtactcagaccaacattacgctgaaa
acctcgaaacatatagagactttggccaagataccttcaccaccatgtatggcgttgccc
catagtttccattcaccttcacagtatcaaatggcaagacgtgactcaccttgcccttca
gacttccatgatggtgtacagaaagacagtgagagtaggggactggaatatgaggaggtg
gatctgcagaggaacaccactcaggataagcttggcctgaagttatgttacaagacggat
gatgagaagtctgccatttatattagcgagattgatcctgaaggaattgcagcaaaagat
ggcagagtccaggaaggagactggattatccagatcaatggaagggatatccagagccat
gaggaggcagtgacacttctgaccaaggtggagagtaagaatgtaaccctcctagtggct
cgactagaaagtcaggatgttggctggttggaggatagaaacaacttagatgacttgcac
atgggcacactggagcagcaacatcacaaggtcaaggagttcactacaagtatgctgcag
cagagcacaaatgaagaagatggaggcactacagatacggctactttactatccaaccag
catgagaaagacagcggtgtaggccgcacagatgaaagcactcgtaatgatgaaagctca
gagcaggacatcttgggggatgaccagaattccctctgtgacactcttccagaaagccac
aagaagtacaactataatcaggaaactgttgaaagtggcgacatgcacttaagcaatgac
tccttcctttcggctgacaatggagatggtgaaatcttccttggtatacctggcatggca
tgtgaacatttccagaaactgcttgaattgaaatctctggtgaatggtaacaatcttcag
ggattgctggatgatgatcaggagattcagatgcttaatgaggagttgcttagcattgag
ctggaatgcctgagtatcatacaagcacacaggcttcaggctgaaggtggtgatcagcaa
gccaaaaaacctagtgccaagcacttttttgagcaagtcgatcaggaccttatcaataac
caagtggacaatgaaggctctactagtgcttacaacactggagagagctgcttgagttta
catcctactctggaaccagattctcttgaatcccaaaggatggttgctggagacaagggt
aaaggttctcccatgcatagacgcaactcaacaacagcatgctccaaacataacctctct
cccattcaggagatcagccctaccaagagtttacctggagatccagaggttacaaatcag
gggaaaagaaagagtaagaaaaagaacccaaggaggagtcttttgacatccttgcaccat
tcctcatacaagaacacttacatcccagcccatgcacaacattaccaaagctacatgcaa
cttatccagcagaagtcagctgtggaatatgcccagagtcaagccagcttagccagcctg
tgcaagaatgcagaaaccaccctcacacagtccaggcccaagactgggtggaaggtgaag
atccgtagcgatggaacaaggtacatcaccaaaaggcctatcagggaccagcttctgaag
gagcgagctttgcgcattcgagaagaacgctgcagtgtgactacagatgacgatgcagcc
agcgaactaaaactgggtcgatactggaacaaggaggagcgcaaacagcatgcagcacga
gccaaagaacagcgtcaacggcgggaactcatgaagcagtgctgcatacagagcaaagaa
caagccggggcactggacgacaagaaggagcctgatattatccagcttagccgtaaaaag
atgatgaagaggaggaacaagaggatatttgacaattggatgaccattcaggagctgctg
acacatggcacaatgtccacagatggtacaagactatataattcctttctttctgtgact
acagtataa
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