Cyprinus carpio (common carp): 109048940
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Entry
109048940 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109048940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109048940
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109048940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
109048940
NCBI-ProteinID:
XP_042630639
Ensembl:
ENSCCRG00000029280
UniProt:
A0A9R0BCK9
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All DBs
Position
A18:complement(1534340..1557214)
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AA seq
754 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRDSMLVQWEQVKQRVLHTLLGAGEDALDFSQEVEPSFVSEVGVPGRSALDS
MEAAYSRQIYIFNEKIVNGHLQPNLGNLCASVAESLDDKNVSDTWLMVKQMTDVLLVPAK
DTLKSRVSVDMQMAFVRQALQFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVCSLLNI
KLPTPLPGHAGTAAERDGEVEGHPVWALIYFCLRCGDLSATMQVVNRAQHQLGDFKIWFQ
EYMNSPDRRLSPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIGDNHGEVADKTEDY
LWLKLNQVCFDEDGXSSPQDRMTLAQLQKQLLEDYGESHFSASHQPFLYFQVLFLTAQFE
AAIAFLFRVELRLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEAGDPPMVRRLNFIXLL
MLYTRKFESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREVRNNFDMLLGRLE
KDGSRKPGVSDKFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNADKVLELMNKLVES
SYRSVIEPQSNKERLKNMAVAIAERYRTNGIAGEKTVDSTFYLLLDLMTFFDEYHAGHID
RAYDVIERLKLVPLSQESVEERVAAFRKLQRRVD
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatactgagggctttggggaactcctgcagcaggcagaacagcttgcggcagagacc
gaggccgtgtctgagttgccccatgttgagcgaaacctacaggagatccaacaggcagga
gagcgactacgttcccgcactctcaccagaacctctcaagacacagctgacgtaaaagcc
tccatcctcttgggatctcggggtcttgacatcttccatatctcccagcgtcttgaaagt
ctcagtgcagccactacatttgagcctcttgagccagtcaaggacactgatattcagggc
tttctgaagaacgagagagacaatgcattgctgtcagccatcgaggaatcacgccgcagg
acatttctgctggcggaggagtaccacagagactctatgttggtgcagtgggagcaggtg
aagcagagagtgttgcataccctgctgggagctggagaggatgcactggacttcagccag
gaagtggagcccagttttgtgagcgaggtcggagttccaggacgcagtgcactggacagt
atggaagctgcctacagccgacagatctatatcttcaatgagaagatagtaaatgggcat
cttcagcccaacctgggaaatctctgtgcctcagtagctgaaagcctggatgataagaat
gtgtcagacacgtggctcatggtgaagcagatgacagacgttctgttggtgccggcaaag
gacacactgaagagtcgagtgtctgtagacatgcagatggccttcgtcagacaagccctg
caattcctggagaacagctataaaaattacactatggtcactgtttttgggaatctgcac
caggctcagttgggtggagtacccggcacttatcagctcgtatgcagcttactgaacatc
aagctgccgaccccgctgccagggcatgcaggtactgcagcagaacgtgacggcgaggtg
gagggacatccagtgtgggctctgatctatttctgcctgcgttgtggagacctgtctgcc
accatgcaggtggtgaacagggcacaacatcagctgggtgactttaagatctggtttcag
gagtacatgaacagccctgaccgacgtttgtctccagctacagagaataagctgcgactt
cattaccgacgtgtgctgaggaacagtgccgacccctacaagcgtgcagtctactgcctt
attggaaaatgcgacatcggcgacaatcatggagaggtggccgataagacagaagactac
ctgtggctcaagctgaatcaagtgtgttttgatgaggacggangcagttcccctcaggac
agaatgactctagcccaacttcagaaacagctgctggaggactatggtgagtcccatttc
tcggccagccaccagccattcctgtacttccaggtgcttttcctgactgcacagtttgag
gcggccatagcattccttttccgagtggagctgcgtctgcgcagccatgccgttcatgta
gctcttgtgctgtatgaactcaaactgctgctcaaatcatcaggccagagtgcacaactc
ttgagtcaggaggctggagatcctccaatggtgcgaaggctcaacttcatcnagctgctt
atgctctacactcgcaagtttgagtccacagacccacgagaggccctgcagtacttctac
ttcctccggaatgaaaaggacagtcaaggagaaaacatgttcatgcgctgtgtcagcgag
ctagtcatcgagagtcgggaggtaagaaacaatttcgatatgcttcttggaagactcgaa
aaagatggaagcagaaagcccggcgtatctgacaagtttgccggagacacgcgggccatc
attaccaaggtggcatcggaggctgagaacaaagggctgtttgaggaggccgtcaaattg
tacgagttagccaagaacgctgataaggttctggagctgatgaacaaattggttgagtcc
agttatcgctcagtcatcgagccccagtccaacaaagagcgactcaaaaacatggcagtg
gctattgctgaacgttaccgtactaatggtatagctggggagaagactgtggacagcacc
ttctacctgcttctggatctcatgacgttctttgatgaataccacgccggccacatagac
cgagcctacgatgtgattgagaggctaaagctggttcccttaagtcaggagagtgttgag
gaacgggttgcggccttcagaaaacttcagcgacgagttgactaa
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