Cyprinus carpio (common carp): 109049075
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Entry
109049075 CDS
T05134
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109049075 (srek1)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
109049075 (srek1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
109049075
NCBI-ProteinID:
XP_042580946
Ensembl:
ENSCCRG00000004679
ENSCCRG00000038971
UniProt:
A0A9Q9WDF6
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Position
B5:24269936..24292095
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AA seq
515 aa
AA seq
DB search
MSGMPGTNVIQITNLSSAVSSDQMRTLFGFLGDIDELRLYPPDNAPLTFSSKVCYIKYRE
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAVPVASLMSGGGLLPIPS
PTTLQNCGLPLANLGVLKSSLDTSVAALNAIASQPPLMGNVDPSKVNEIRRTVYVGNLNS
QSTTAEQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQESVTRALTFNGVMFGDRPL
KINHSNNAIVKPPELTPQAAAKELEDVMKKVREAQSTIAAVIEPEDKNHSSSRSRRSRRS
RSHSRSPSHSQRKRSRSRQRGRLSQRSRQKVNDSRGSYKRRSRSRERKHSRSRSYSRDLR
KDKDGKVSKEGDWEEKRPRDKKGRTPPKGYSGSRRSRSISRGHKKRSSSRSRSPRWRARS
PSPSKRGKKDKKRDKGRDSSRERTEISMSRRKSRDYEPKSKPSLMERGYEPADHEYDSDM
DGLGSVGSDDRSPQAHLNGSYRSTYVEEYDLSAAE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggatgcccgggacgaatgtgattcaaatcactaatctgtcgtcggcggtgagc
agtgatcagatgagaactctgttcggcttcctgggggacatcgacgagctgcgactatac
ccgcctgacaatgcacctcttaccttttcatccaaagtttgttacataaagtatcgagag
ccttccagtgttggtgtggcacaacatttaaccaacactgtttttattgacagagctttg
attgttgtgccctgtgctgaaggaaaaatccctgaagaggcaaaggcgctctcgcttttg
gcccccgccgtgccagtggccagcctgatgagcggaggaggacttctgcccattcctagc
cccactacactacagaattgtggtcttcctttagctaatctgggggtcctgaaatctagt
ttggacacatctgtggcggctctaaatgcaattgcttcacagcctccgctcatgggaaat
gtagatccttctaaagtcaatgagatcaggaggacggtatatgtcggcaatttgaattca
cagagcaccacagcagagcagctcctcaagttcttcaagcaagtgggagatgttaagttt
gttagaatggcaggagatgaaacccagcctacacgttttgcttttgtggagtttgctgat
caggaatcagtgacacgagcgcttacatttaatggagtcatgtttggcgacagaccacta
aagattaaccactccaataatgccatagtgaagcctccagagctcacacctcaagctgcg
gccaaagagctggaggacgtgatgaagaaagtcagagaggctcagtcaaccattgctgct
gttatcgagccagaagataaaaatcattcatccagtagatctagacgttctagaaggtcc
agatctcactctcgctccccatcacactcacaaagaaagcgatccagatccaggcaaagg
ggacgcctgtcccaaagatcacggcagaaggtgaatgactcccgtgggtcctataagagg
cgctcacgttcccgagaaaggaaacacagccgaagtcgatcttattctagggacctaagg
aaggacaaggatggcaaagtaagcaaggaaggtgactgggaagaaaagaggccacgggac
aaaaagggaaggacgcctcctaaaggctacagtggctctagacgttcccgcagcataagc
agaggccataagaaaagaagcagctctcgatccaggtcaccaagatggagagccaggtca
ccatcaccgtctaaaagaggcaagaaagataaaaagagggataaaggacgggacagtagc
agggaaaggacagaaatctcaatgtccaggaggaaaagcagggattatgaacctaaatct
aaaccatcactgatggagaggggctacgagccggcggaccacgagtatgacagtgacatg
gatgggttgggttctgtgggtagtgacgacagatctcctcaagctcatctcaacggcagc
tataggagcacttacgtcgaggagtatgatctctctgcagctgagtga
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