Cyprinus carpio (common carp): 109049238
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Entry
109049238 CDS
T05134
Name
(RefSeq) tripartite motif-containing protein 54-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109049238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109049238
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109049238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-RING_5
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
Serine_rich
zf-RING_6
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
109049238
NCBI-ProteinID:
XP_042568870
Ensembl:
ENSCCRG00000002506
ENSCCRG00000013130
UniProt:
A0A9Q9ZPG1
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All DBs
Position
A23:complement(9067866..9075641)
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AA seq
428 aa
AA seq
DB search
MSLPLDIRSSHRDPSLGTLEKQLICPICVEVFTKPVVILPCLHNLCRKCANELYQPSLFQ
VGIGGRFRCPSCRREVVLDRHGVYGLQRNLLVESIIDVYRQESESSRPPPKPPAQFSCTE
HEDEKLNIYCITCQVTSCSLCKVFGAHKNCQVVPLPDVYQQQKAELSDRLAALVSTNDCV
QSFVNELEALCRNIEENSRIQKQILSEKFDRLSAILEERRKIMSQQITSEQEEKTGWTQS
LQQTYSEHVDTNSKLIQAAQNAIEDPEMASFVETSQDLIEKVGKASNCFTQESLDPDYEK
MDHYRVDFDAEERVLYQLDFMEIEEEVEETFDEPESEPESDCEPVETPEPDPELDQCLKS
EASEMTNPMPETTEDTCGQADSCRDIRKAAVCEKNGLSTSQVRSSTNVSIHSLSQSFHFR
TLQYQHLT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccactggatatacgctcttcccacagagacccttcattggggacgctggag
aaacaactcatctgtcccatctgtgtggaggtcttcaccaaacctgtggtcattctgccc
tgtctgcacaacctctgccgcaagtgtgccaatgaactttaccagccatctctcttccag
gttggaatcggaggacgttttcgctgcccttcctgtcggcgtgaagttgtcttggaccgt
catggagtttatggactgcagcgcaatttactcgtggagagcattattgatgtttacaga
caggagtcagaaagctctaggcctccaccaaagcctcctgcacaattcagctgtacggag
catgaagatgagaagcttaatatttattgcatcacgtgtcaggtgacctcctgctctctc
tgtaaggtgtttggggcccacaaaaactgccaagtagttcccctgcctgatgtttaccag
cagcagaaggctgaactcagcgacagacttgctgctttggtttccacaaatgactgtgtt
caatcatttgttaatgaactagaggcactctgcaggaacatagaggaaaacagcaggatc
cagaaacagatattgtctgagaagtttgatcgcttgtctgccattctggaagaacgtcgt
aagataatgagccaacaaatcacttctgagcaggaagaaaagaccggctggacccaatct
ttacagcaaacatacagtgagcatgtagacacaaactcaaagctgatccaggcagcccag
aatgccatagaggacccagagatggcttcttttgtggagacctcacaagatcttattgag
aaggttggtaaagcatctaactgcttcacgcaggagtccctggatcctgactatgagaag
atggatcactacagggtggattttgatgcggaggagagagttctgtatcagctggacttc
atggagattgaagaagaagtggaggaaacatttgatgaaccagagtcagaacctgagtct
gactgtgaaccggtggagaccccagaacctgaccctgaactagatcagtgtctaaaatca
gaagcttctgagatgacgaatcccatgccggagacaacagaggacacttgcggacaagca
gacagttgtagagacatcagaaaagcggctgtgtgtgaaaagaatggtttaagcacttca
caggtacgttcgtctactaatgtgagcatccacagtctcagtcaaagttttcacttcagg
acacttcagtatcaacacctaacttga
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