Cyprinus carpio (common carp): 109049820
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Entry
109049820 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI1-like
KO
K16797
zinc finger protein GLI1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109049820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109049820
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109049820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
FOXP-CC
zf-H2C2_2
Zap1_zf1
zf-C2H2_4
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
109049820
NCBI-ProteinID:
XP_042615147
Ensembl:
ENSCCRG00000018721
UniProt:
A0A9Q9Y7M9
LinkDB
All DBs
Position
A6:31743465..31788978
Genome browser
AA seq
1442 aa
AA seq
DB search
MPVDMQVHQGLYHYNNTAIQPSRGYDHSHYPQSLTKTHLIHISRPPREHTGRAKNDQQTN
KTCSNPSMTPGACMDPYMRPPHAPPPHGMMGHRGMPPPEGVGGAPYCNQSMMTSHHNLAH
NQPGSEHMGSGDASCFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVNS
RCGPNAASSYGHLSVGTMSPSLGFSGSMNYPSRPQSNMYGSPLSHPVPSCHGGPHNPRLH
APHKHTHVSPVALSHSTQCHWICITNIKSLEERSEGDVASPSSTGTQDPLLGLLGGQRXS
GXGEKPEPEGQFTQKTNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWQDCSREQ
RPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRCAHGHTHTGEKPYVCE
HEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHIT
KKHRGDTGPRPPGLTNAGQSSELLIEKEERSREDCKLLAPETTLKSQPSPGGQSSCSSER
SPLGSANNNDSGVEMNLNAAGSLEDLTTQEESGNTGVSESGGGSGGMCMSVQALKRLENL
KIDKLKQIRRPTPPGRSAGNKLPALSATGEKMGMCAPPPLLSNRRVMELSAPDLGGVSGM
GMPCPPNDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSDVSQVGHCQSVMGADVPGDP
LSPQNSQRGGSCQNPGGLPGLPSLTPAQQYSLKAKYAAATGGPPPTPLPNMDQPGTPGRF
LRECHGQPLPPFLQQGGTRRHSANAEYGTGVIYPHQAPGNNMRRASDPVRSAADPQGLPK
VQRFNSLSNVSLMSRRNALQQCGSDAALSRHMYSPRPPSITENVMMEAMAMDPHGTAEGR
EQGNMIQIGDRAYMGYQHPHHHPHNASQLSPGQEGLSCMDQVYQSQMQGPYQGQREEICA
TGMMGQGDIANSLLQQAEYGMSNCQLSPSGPHYPSHADGSGPWGQTNHLHSPQTDTQYQG
AGMQGQHYPQQGVYNPTSDPGHQRVTVKPEQFHSSIGGTSSCQNTKPLPQHRHNVNMQTY
PSQSQGRGLMSRSSNVNCDFLQGQMGTQASLPQQSQAGSFPSGGGINLALAETRGSQTPM
HQMKEMMVRNYVQSQQALLWEQQQEQRVVDGLSGKPDGMDMGGQTAMMQHSPQHQQANQN
LYSGNSYQGYPNQNLMSPPQNTVPGSIKEHTAGMQGSCYGPDMVPRPPQGRKPLSRQNSL
SQQTGGAYLGSPTHLSPVHSTASPRRAVRLPPVQQQQHSEKFTNNNNPMYYSGQIHMHHN
IEKIQDGPCLAQQHLTGIDPNTKPTLMAYTDPAPMSNALENLDLENAQIDFASIIDDPEP
SSYSPINPPLGHHQCSSQTSSRLTTPQTSITLPSGLSNMAVGDMTSMLTSLAGENKYLNT
LS
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggatatgcaggtgcatcaggggctgtaccactacaacaacaccgccatccag
ccgagccgagggtacgatcactcacattacccacaatccctcactaaaacacatctgatt
catatcagccgtcctccacgtgaacacacaggtagagcaaaaaacgaccaacaaacaaac
aaaacctgttcaaacccctccatgaccccaggagcctgtatggacccctacatgcggccg
ccacacgccccgccgccgcacggcatgatgggacaccgcgggatgcctccgccagagggt
gtcggtggcgccccctactgtaaccagagcatgatgacatctcatcacaacctcgctcat
aaccagccgggatctgaacacatgggatcaggagacgcgtcttgtttctcgacgcctcgc
tccatgctgaagctgagtaagaagcgcgctctgtccatctctccgctgtctgacgccagc
gtggacctgcagacggtcatccgcacctcgcccaactctctggtggcgtttgtgaactct
cgctgcgggccgaacgctgccagctcatacgggcatctgtctgtgggcaccatgagtccg
tcgttgggtttctccggctccatgaactacccgtccagaccacagagcaacatgtacggc
tctccgctctctcatcccgtcccatcatgccacggggggccacacaaccccagacttcac
gctccgcacaaacacacacacgtgagtcccgtcgctctctcacacagcacacagtgtcac
tggatttgcataacaaacatcaagagcctggaggagcgctcggagggagacgtggccagt
ccgtcctcgactggaacacaggatcctcttctgggtttactgggagggcagagatgatct
ggataaggagagaaacctgaaccagagggccagtttacgcaaaagaccaactgccactgg
gagagctgcagcaaagagtttgacacccaggagcaactcgtgcatcacatcaataacgag
cacatccacggggagaagaaggagtttgtgtgtcactggcaggactgctctcgagagcag
cggccctttaaagcccagtacatgctagtggtgcacatgcgcagacacaccggagagaaa
cctcacaagtgcacttttgaaggctgtaataaagcatattcgcgtctggagaacctgaag
actcatctgcgctgcgcacacggccacacgcacaccggcgagaaaccctatgtgtgtgaa
cacgagggctgcaacaaggctttctccaatgcgtcagaccgcgcaaagcaccagaaccga
acacactccaacgagaaaccatacgtttgtaagatccccggctgtacgaagcgctacacc
gacccgagctctctgaggaagcacgtgaagacggtgcacggacccgaggctcatatcact
aaaaagcaccgcggagacactggaccacgtcctccaggtctgaccaatgcaggtcagagc
tctgaacttctgatagaaaaagaggagagaagcagagaggactgcaaattgctcgctcca
gaaaccacactgaaatcccagccaagtcctggcggccagtcatcctgtagtagcgaacgt
tctcctctggggagcgccaacaacaatgacagcggagtggagatgaacctcaatgcggcg
gggagtctggaggacctgaccacacaggaggagagcgggaacactggcgtgtccgagtcg
ggcggaggctcggggggaatgtgcatgtccgttcaggccttgaagaggttggagaacctg
aagatcgacaaactgaagcagattcgccggccaacaccacctgggcggagcgcagggaat
aaactgccggctctctcagcaacaggagagaagatgggcatgtgtgcacctccacccttg
ctctccaaccggcgtgtaatggagctttctgccccggatctgggtggagttagtggaatg
ggaatgccttgcccaccgaacgaccgacggggcagcggcaccagcagcctcagctctgcc
tacacagtgagccgccgttcatccatggtctcgccctacctatcaagcagacgctcaagt
gacgtgtcccaagtgggtcactgccagtccgtgatgggggctgatgtgcctggcgaccca
ctatctcctcagaacagccagaggggcggatcatgccagaaccccgggggattgccaggt
ctaccgagtctgactcctgcgcagcagtatagtctgaaagctaaatatgcagcagcaaca
ggcggcccgccgccaaccccgctacccaacatggaccaacctggcacccctggaagattc
ctgagggaatgccatggccaacctcttcctccgtttctgcagcaaggcggtacgaggaga
cacagtgctaatgccgaatacggcacgggagtgatttatccgcatcaagcacctggcaac
aacatgaggcgtgccagcgatccagtacgctcggctgccgacccacagggtttacccaag
gtgcaacgctttaatagcttgagcaacgtgtcccttatgagtcgccgcaatgcactgcag
cagtgcgggtctgatgccgctctcagcaggcacatgtactcacctcgtccaccgagcatc
actgaaaatgttatgatggaggccatggctatggatcctcatgggaccgccgaaggcaga
gagcagggaaacatgatccaaattggagaccgagcatacatgggctaccagcatcctcac
caccaccctcacaatgcaagtcagctgtctcccggacaagaaggtctgagctgcatggat
caagtctaccagtctcaaatgcaaggtccgtaccagggccagcgcgaggagatctgtgcc
accgggatgatgggtcagggtgacattgcgaacagtcttctacagcaagctgagtacggc
atgagcaactgtcagctcagcccctccggtccacattatcccagccatgctgacggatca
ggaccctggggacagaccaaccatctccacagccctcagaccgatacgcagtaccagggt
gcaggcatgcaaggacagcactaccctcaacagggtgtatacaaccctacatctgaccct
ggccatcaaagagttactgtaaaaccagagcagttccattcatccataggaggaaccagt
tcttgccagaacaccaaacctctaccccagcatcggcataatgtgaatatgcagacgtat
ccatcgcagtcccaaggccggggcctcatgagcagatcctccaatgtgaattgtgacttc
cttcaaggccagatgggaacgcaagccagtcttccacagcagagccaggcgggatcattc
ccaagcggtggagggataaatcttgcactggcggagacccgtgggtcgcagacaccaatg
catcaaatgaaggaaatgatggtgaggaactatgtgcagtcccagcaagcgctcctgtgg
gaacagcagcaggagcaaagggtagtcgatggtctctctgggaagcccgatggcatggac
atgggaggacaaacggcaatgatgcagcatagcccacagcatcaacaagctaaccagaac
ctttattctggaaactcctaccaaggctacccgaatcagaacttgatgagcccaccacaa
aatacagttcccggttccatcaaggagcataccgctgggatgcagggatcctgctacggg
ccggatatggtgccacgaccacctcagggacgaaagcctctaagtcgccagaacagccta
tcccagcagacaggtggagcttacctgggcagcccgactcacctgagcccagtccactcc
actgccagtcccagaagagcagtgcggctcccgccagttcagcagcagcaacattcggaa
aaattcaccaataacaacaaccccatgtactactcaggccagatacacatgcaccacaac
atagagaagattcaggatggtccatgcctggctcagcagcacctgacagggatagaccct
aataccaagcccacattgatggcctacacggaccctgcacccatgtccaacgccttagaa
aacctggacttggagaacgctcagattgactttgcttccatcattgatgacccagaacct
tcatcttacagtccaataaacccaccgctgggtcaccaccagtgctcctctcagacctcc
tcccgtctcaccacaccccaaacctccatcacccttccaagtggcctttccaatatggca
gtcggggacatgacctcaatgttgacatcccttgctggggagaacaagtatttgaacaca
ttgtcttaa
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integrated database retrieval system
