Cyprinus carpio (common carp): 109049833
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Entry
109049833 CDS
T05134
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X2
KO
K17908
autophagy-related protein 18
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04136
Autophagy - other
ccar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109049833
04136 Autophagy - other
109049833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109049833
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109049833
Membrane trafficking [BR:
ccar04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109049833
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109049833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_Vps41
RMC1_N
BCAS3_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
109049833
NCBI-ProteinID:
XP_018923043
Ensembl:
ENSCCRG00000052673
UniProt:
A0A9Q9UYM3
LinkDB
All DBs
Position
A3:complement(20233421..20243764)
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AA seq
443 aa
AA seq
DB search
METGDVGPGLCCASFNQDSTSLAVGTKTGYRLFSVTSVDKLDCIHESKTPDVYIVERLFS
SSLVVVVSQSMPRRMNVYHFKKGTEICNYSYSNNILAVRLNRQSLVVCLEESIYIHNIKD
MKLLKTLLNTPSNPSGLCALSISHSNSFLAYPGSDTIGEIIVYDANNLSTMTMIPAHDSP
LAAITFSASGTKLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVNISSLSFSPDAQFLC
ASSNTETVHIFKLEQHSPSGEEQAPSWSTYVGKMFTAASSYLPAQVSGMMSQDRAFATVR
LQMAGQKNVCALATIQKLPRLLVASSDGQLFIYNIDPQDGGECTLVQKHRLFGSDKEWEE
TEKSKLMEPPQACQSYAATVAIPTSGPVTATLTGYSEDGGAKKGEVIPEHEFAAGPVCLD
DETEFPPINWCRDGSGRGKGRRP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagatgttgggccggggctgtgctgcgcctccttcaaccaggactccacg
tctttggctgtgggcaccaaaactggatacaggctattctctgtgacctcggtggacaaa
ctggactgcattcatgagagcaaaactccagatgtgtatatcgtggaaaggcttttctcc
agcagcctggttgtggtggtgagccagtccatgccacgtcgcatgaacgtctaccacttc
aaaaagggcacagagatctgcaactacagctactcgaacaacattcttgcagtgcgtcta
aacagacagagtctagttgtctgtctggaggaatccatctatatccacaatataaaagac
atgaaactcctgaagacccttctcaacacaccatcaaacccatcaggtctctgtgctctc
tccatcagccattccaactctttcttggcatatccaggaagtgacaccattggagaaatt
attgtctatgatgccaacaatctgagcactatgaccatgattccagctcatgacagtcca
ctggccgccatcaccttcagtgcttctggcaccaaactggccagtgcttctgaaaggggc
acagtgattcgagtcttctccatcccagagggactgcgcttgtttgagttccggcggggg
atgaagaggtatgtcaacatcagctccctttccttcagcccggatgctcagttcctctgt
gcctcgagcaatacagagacggtgcacattttcaagcttgaacagcacagcccaagtggg
gaggagcaagctccctcttggtcaacatatgtaggtaagatgttcacagcagccagtagc
tacctcccagcacaggtgtcaggcatgatgagtcaagaccgagcctttgccaccgtccgg
ctccagatggcaggtcagaagaatgtctgtgccctggcaacaatccagaagcttccacgt
ttgcttgtggcctcctctgatgggcagctattcatctataacattgatcctcaagatggg
ggtgaatgcactctggtgcagaagcacaggttgtttggatcagataaggagtgggaggag
actgagaaatccaaacttatggagccaccgcaagcatgccagtcctatgctgccactgtg
gccatccccacctctggacccgttacagccactctcacaggctactcagaggatggggga
gctaagaagggtgaggtgattcccgaacacgagtttgcagcagggcccgtgtgcttggat
gacgaaactgaatttcctcccataaattggtgccgtgacggatctgggcgaggcaagggg
agacgaccgtga
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