Cyprinus carpio (common carp): 109049834
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Entry
109049834 CDS
T05134
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109049834 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109049834 (spata13)
Membrane trafficking [BR:
ccar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109049834 (spata13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
Motif
Other DBs
NCBI-GeneID:
109049834
NCBI-ProteinID:
XP_042608460
Ensembl:
ENSCCRG00000020192
LinkDB
All DBs
Position
B24:complement(14238804..14257455)
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AA seq
799 aa
AA seq
DB search
MECHQNGINNHYSHMPKQCSSPSQKQTVNGVDLNFECLWTEERETDDLEASSDITKTFLE
SDEISAAAASPVPNTCSSQSPLVTPTTPISPPFASDSSSSVVSRKSVGRSRPRPVSDYGQ
LASSKYCIPEEDRESETMDYTSQKDYNSNGSYTESNRPKNGHVCTQTESRKRRPISVIGG
VDLYSSPTAEQKDDTESLPSPVSRPPVPSHRVPPYRAVSARLRPCVFSQSTPIGLDRMGR
RKGRRVLSDGSSDPMLDDSVSEEDGSFEELTETPYLQPEVDLFTLNQYIQLGHAVYAEAL
WDHVTMEEQELAFKAGDVIRVLDVQEQDWWWGAVGDREAWFPSSFVRVRVNQEDSSSDSV
EIPPDAEESIPPDTHKQNSEHRQQMRANVVKEIMDTERVYIKHLKDICEGYIRQCRKHPG
MFTDTQLKTIFSNIEDIYRFQRKFLKDLEKKYNPQNPHLSEIGSCFLQQEDGFCIYSEYC
NTHPVACAELQRLMKQGRYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLK
YTPKDHSDYTGVCAAHKAMKNVASLINERKRRLESIDTIAHWQVAILHWAGEDVLTRSSE
LIHSGELTRLVRPGKTQQRSYFLFDHQLVFCKKDVLRRDLLHYRGRMDTDLLEPIDLPDG
RHAELGLLKNAFLIRHSENLNVLCVLCCKKSQDKQRWLQAFARERRRVQEDQEMGMEITE
AQRKQAVHNARKTKQGNMKKMNYSDHPVPPHHQPLHPLHQRHVTVPTSIPQQQVFSLAEP
KKKPSHLLYSLARSALFRK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagtgccatcaaaatggaataaataaccactactctcatatgcccaagcagtgctca
agccccagtcaaaagcagacagtcaatggtgttgatcttaactttgagtgtctatggact
gaagagagggagactgatgatcttgaggcttcatcagatatcacaaaaacgtttctcgaa
agtgatgagatctcagctgctgctgcttcacctgtcccaaacacctgttcctcacagtcc
cccctggtgactccaacaacaccgatctctccaccctttgccagtgactcttcctcttct
gtagtgtccaggaaaagtgttggtcgctccagacccaggccagtctctgactatggccag
ctggccagctcaaagtactgcatcccagaggaggacagggagtccgagactatggactac
acttcccaaaaggactacaatagcaatggcagctacacagagagcaacagaccaaagaat
ggtcatgtgtgcactcaaacagagagcagaaagagacgtcccatctctgttataggagga
gtggatctgtattcatccccaactgctgagcagaaggacgacactgaaagcttgccttct
ccggtatcccgtcctccagtgccctctcatagagtgcctccataccgggccgtatctgcc
cgtctgagaccttgcgtcttctcccaaagcacacctatcggactggataggatggggcgg
cgcaaaggacgcagagtgctcagcgatggcagctctgatccaatgcttgatgatagtgtg
agtgaggaggatggcagctttgaagaactgactgaaacaccatatctacaaccagaagtc
gatcttttcacactcaatcagtacatacagttgggacatgccgtgtatgcagaggctctg
tgggaccatgtcacaatggaagagcaggagctggccttcaaagccggggatgtgatccgt
gttctggacgttcaggagcaggactggtggtggggggcggtgggcgaccgcgaggcctgg
tttccctccagctttgtgcgagttcgggtgaatcaggaggattcaagcagtgatagtgta
gaaatcccaccggatgccgaggaatccatcccaccagatactcacaaacaaaactcagag
cacagacagcagatgagagccaatgtggtcaaagaaatcatggacacagagcgcgtttac
atcaaacatctcaaagatatctgtgagggatatatccgtcagtgtaggaagcaccctggc
atgtttactgatacacagctaaagacaatcttcagcaacattgaggacatctacaggttc
cagagaaagtttctgaaggacctagaaaagaaatacaacccccaaaaccctcatctcagt
gagattggctcctgctttctacaacaggaggacggtttctgtatatactctgaatactgt
aacacacatccagtggcgtgtgctgaattgcaacggttgatgaaacaaggcagatataaa
catttcttcgaagcctgccgtctcttacagcagatgatcgacatctccattgctggcttc
ctactcacacctgtacagaagatttgtaaatacccccttcagctgggagagcttttgaaa
tacacacccaaagaccacagtgactacacaggggtgtgtgctgcacataaagcaatgaag
aatgtggcaagtctgataaatgaaaggaaaagacgacttgagagcattgacaccatcgct
cactggcaggtggccatcctccactgggcgggtgaagatgtgttaacgcgaagctctgag
ctcatccactccggcgagttaacgcggttagtgcggcccggtaagacgcagcaacgcagc
tacttcctgtttgaccaccagctggtgttctgtaagaaagacgtcctgcggagagacctg
ctacactaccgtggccgtatggacactgacctactggagccaatcgacctgcctgatgga
cggcacgctgagctgggcctcctgaagaacgcgtttctcatacggcattcagagaacctg
aatgtgctgtgtgtgctgtgctgcaaaaagagccaggacaagcagcggtggctgcaagcg
tttgctcgagagcgcagacgggtacaggaagaccaagagatgggcatggagattactgag
gcccagaggaagcaagcagttcacaacgccaggaaaactaaacaaggaaatatgaagaaa
atgaattattctgatcatcccgtgcctcctcaccatcagccgctacatcctctccatcag
cgacatgtgactgtgccaaccagcatcccccagcagcaagtcttctctttagcagagcca
aagaagaaaccatctcacctgttgtactcacttgcacgcagtgccctcttcaggaaatga
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integrated database retrieval system
