Cyprinus carpio (common carp): 109049858
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Entry
109049858 CDS
T05134
Symbol
hoxa13b
Name
(RefSeq) homeobox protein Hox-A13b
KO
K09298
homeobox protein HoxA/B/C/D13
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109049858 (hoxa13b)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
109049858 (hoxa13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HoxA13_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109049858
NCBI-ProteinID:
XP_018923072
Ensembl:
ENSCCRG00000004452
UniProt:
A0A8C1X3F1
A0A9Q9ZBD9
LinkDB
All DBs
Position
B16:13003161..13005110
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AA seq
289 aa
AA seq
DB search
MTASLLLHSRWIDPVMFLYDNGLDDMSKNMEGFVGGNFAANQCRNLIAHPSSLAPSTTYT
SSEVPGPGMGEPVKQCSPCSAVQNSPSASLPYGYFGGSYYPCRMPKSCTQPTSYGEKYMD
TSVSGEEFPSRAKEFAFYQGYSSGPYQPVPSYLDVPVVPALSTPAEPRHESLLPVEPYQP
WAITNGWSSPVYCPKDQTQSNSLWKSSIQDSVSGTDGASVRRGRKKRVPYTKVQLKELER
EYATNKFITKDKRRRISAHTNLTERQVTIWFQNRRVKEKKVVNKYKGIS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgtctttactcctccattcccgctggattgacccggtgatgtttctctatgac
aacggcttggatgatatgagcaaaaacatggaaggatttgtgggaggcaattttgctgct
aaccagtgcaggaatcttattgcccacccgtcttctttggccccgagcacaacctacacg
tcgagtgaggtgccaggaccgggcatgggggaacctgtcaaacaatgcagtccgtgttca
gccgttcagaactctcccagtgcttctttgccctatggatattttggcggcagctattac
ccgtgtaggatgcccaagtcctgcacacagcccacctcctatggggaaaaatacatggac
acgtctgtttctggagaggagttcccttctcgtgctaaggaatttgccttctaccagggt
tactcgtctggcccttaccagcctgtaccgagttatctcgacgtgccagtcgtacctgcg
ctgagcacccctgcggaacccagacacgagtctcttctgcccgtggaaccgtaccagccc
tgggcgatcacgaacggatggagcagtccggtgtactgccctaaagaccaaacgcagtca
aacagcttatggaaatcgtctattcaagattctgtatcgggtaccgatggagcctcggtg
cgtcgagggagaaagaaacgggttccctacaccaaggttcagttgaaggaactagaacga
gaatatgccacaaacaagttcattactaaggacaagcgaagaaggatatctgctcacaca
aacctgaccgagcgacaagtgaccatctggtttcaaaacaggcgggtgaaagagaagaaa
gtggtcaacaagtacaagggcatcagttaa
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