Cyprinus carpio (common carp): 109050046
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Entry
109050046 CDS
T05134
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04520
Adherens junction
ccar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109050046
04530 Tight junction
109050046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
RA_2
PDZ_6
PDZ_2
RASSF8-10_RA
RA_3
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
109050046
NCBI-ProteinID:
XP_042634349
UniProt:
A0A9Q9Z971
LinkDB
All DBs
Position
A20:complement(25354262..25471992)
Genome browser
AA seq
1841 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIMPKKTLTNGPEKEKEGVIQNFKRTLSKKEKKKEKKMEKQAFSRIPD
GDDNILNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSGDG
RPDSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVAEALEKYGLEKENPRDYCIAQVIH
ANDKPVKEAILDDTDCPLQILRDWTSDTEALVFQLKKRPPDYAPRKGRKPDNRMGPPHGS
IPPEKLPYLVELSPGRGSHYAYYYRHHEDGSDSRDKPKLYRLQHSVTEVGSDRSEDGNIQ
LFGPGILPHHCDLMHEDGLVTVTPVSLDAETFVDGQRISDTTLLRSGVTVQFGATHVFKF
VDPSYDHSMSRDPGPMMKGRHKSGIVPETTFDLHGDVHSGSALPTSKSSGKLEMERSGNS
ERGLVKPMIRGEQQDFNKHDGRSQDGPELTLPATIEFRENSEDAFLSAIINYTNSSTVHF
KLSPTYVLYMTCRYVMSSQYRPDISPSERTHKVIGIVNKMVSMMEGVIQEIAEGDQKQKN
IAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVHCLQSDLNNYMP
AFLEDPDEQNPQRPKIEDVLQTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLV
TEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDV
QNINNTCFKLNSLQLNALLSNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQL
EEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLEPLCQRGFCRLTPHPRSPGTWTIYFEG
ADCDSHFSADTSELPMRKEPEIVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGGA
ADMDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLSQ
PSPMMPRASDRGRGDKGKMRPKSEGFELYNNSVQNGSPESPQETWDTYPEPKKEDRLLKN
RADHRSSPNVANQAQSPGGKPVYPGAPGKITSVSTGNLCPDEEPSPPRPEAYPIPTQTYQ
REYFTFPASKSQDRMGPGQPWQNNELEPLPPMDNHSNNSMAMQQVARSQEELCDMPGGYP
GEHLRQEDLMPLQYQRGGGEHWNHQMSSSVESSTSSQEHLNYSSSSGSRIQGNHKSGPGR
WKTPIPNSGPVGVSQPSRSDLPPPPPPPPAHYDYEPQTDLPLPPPPSVTQQQAAAAAATA
DRKKREEQQRWYEKEKARLEEERERKRRDQERKLVQIRNPPGPVMHNNQHGPLPPAPQHQ
QMPHSQLPMQVPQPYLPPVQPSQPPQPQPARPDKLSSLPRQPPQDTVIRDLLPQQQPRTI
ERRDLQYITISKEELSASDSLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQDLQAKPERT
AEENDRLRKLMLEWQFQKRLQESKQNEEDEEEEDDEDVDTTLIMQRLEAEKRARLQDEER
RRKQQLEEIRKREAEERAKQEEERHWREEERARREAEEKRRQEKEYYTRLEAERRRQHEE
AERKLLTPDEPGLYRPPLPRDYQPPSPSSTPATNNNSAPPPPPQRNTSYLKTQVTSPDTI
YTAKFVSYNDEEEEDEEDAGLTGFNSYTGNTTGLGSGEIYKDPREKWTKGGPDQENTIGG
APESLTFKERQRLFSKGKEVSNKVKASRKLMELENELNVKQ
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagccgagaggaggagcggcggaaactcgccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccaaccgactgaggacttagagttccatggc
gtgatgcgcttttacttccaggatcgagtggcggggaacttcgccacaaagtgtatccga
gtgtccagcaccgcgaccacgcaggatgtgatcgagacactggcggaaaagttcagaccg
gatatgaggatgctgtcttctcccaaatactccctctatgaggtccatgtcagtggcgaa
gagaggaaactggacttggatgagaaaccactggtcgtacagctgaactggaacaaagat
gacagagaaggccgcttcgttctcaagaatgagaacgacatcatgcccaagaaaacactg
acaaatggccctgagaaagagaaggagggggtgatccagaacttcaaaagaacattgtca
aagaaggagaagaagaaagagaagaagatggagaagcaggccttttccagaattccagat
ggagacgataacatactgaaccgcgaggatggagagaactctaggttggctgctgaggta
tataaagacatgccagagaccagtttcacacggaccatttcaaaccctgaggtggtgatg
aagaggagacggcagcagaagctcgagaagaggatgcaagaatttcgcagtggagacggt
cgaccggactcaggagggactctgaggatctacgccgatagtctgaagccaaacattccc
tacaagaccatcctgctctcaactactgatatggctgactttgctgtggccgaggctctg
gagaaatacggtctggagaaggaaaatcccagagattactgcatcgcccaggtgattcat
gcaaatgataaaccagtgaaggaggctatactagacgacacagattgccctctgcagatc
ctcagagactggacaagcgatacagaggccttagtattccagctgaaaaagcgtcctcca
gactatgctccaaggaaaggacgtaagcccgacaacaggatggggccgcctcacggatcc
attcctcccgagaaactgccctacctggttgaactgagcccagggcgagggagtcactat
gcctactactaccgccatcatgaagatgggtcagactccagggataaacccaaactttac
cgactacagcatagcgtcactgaggttggatctgaccggagtgaagatggaaatattcag
ctgtttggacctgggattctgcctcatcactgtgacctgatgcatgaggacgggctggtg
actgtgacccctgtcagtttggatgctgagacattcgtggatggacagcggatctctgac
actacgcttctgcgcagcggggtgaccgtccagttcggagccactcacgtcttcaaattc
gtagaccccagctatgaccacagcatgtccagagacccagggcccatgatgaagggcaga
cacaaatcaggcatcgtcccagaaacgacctttgaccttcacggggacgttcatagtggc
tctgctctccctacaagcaagagctcagggaagctggagatggagcgttcaggaaacagt
gaaagaggcctggtgaagcccatgattagaggagaacaacaggactttaacaaacatgat
ggaaggtcccaggatggcccagagctcactctgccggccaccatcgagttcagggaaaac
tccgaggatgccttcctgtctgccatcattaactacaccaacagctcaacggtgcacttc
aagctgtctcccacctatgtgctgtatatgacctgccgttacgttatgtccagccagtac
cggcctgacatcagcccctctgagcgaacacacaaggtcataggcattgtcaacaagatg
gtgagcatgatggaaggagttatccaggagattgctgaaggtgatcagaaacagaagaac
atcgccggggctctggccttctggatggctaatgcctcagagctactgaacttcatcaaa
caggacaaggatctgagtcgcatcacgctagatgcacaggatgttctcgctcacctggtt
cagatggcttttaagtacctggtgcactgcttgcagtcagatttgaataactacatgcca
gctttcctggaagatcccgatgaacagaacccacagaggcccaagatagaggatgttctg
cagacattaacaggcgccatgtctcttctgcggcggtgccgtgtcaacgctgccctcacc
attcagctgttctcgcagctcttccacttcatcaatatgtggctctttaacaagctggtg
acagaggcagactcgggcctgtgctcgcactattggggcgccatcctgcgacagcagctc
agccacatcgaggcgtgggctgagaaacagggtttggagctggctgcagactgccacctc
agtcgtatagtgcaggcaacgaccctcctcactatggacaaatactccatgcaagatgtg
cagaacatcaacaacacctgcttcaagctcaactctctgcagctcaatgctctgctgagc
aactaccactgcgctcctgatgaaccctacattcctcctgagctgattgatcatgtggtg
gctgtggccgagaacacggcggacgaactggcccgaagcgatgggcgggaagtacagttg
gaagaggaccctgacctccagctgcctttcctactgcccgaggatggctactcgtgcgac
gtggtgcggaacattcccaacggattccaagagttcctagagccactttgccagagaggt
ttctgtcgattaacacctcatccacgctctccgggaacttggaccatctattttgaagga
gccgattgtgacagtcacttctcagctgacacgtcagaactgccaatgcggaaggaaccg
gaaattgtgacagtgactttgaagaaacacaatgggatgggcctcagcattgtggcagcc
aagggtgccggacaggacaaactcggcatttacatcaagtctgttgttaaaggaggtgcg
gcagacatggatgggcgtctggctgctggagaccagttgctcagcgtggatggacgaagt
ctggtcggcctctcacaagagagggcggcggaattgatgacacgaaccggctcggtcgta
acactggaggtggccaaacagggagccatttaccatggtctggccacactcctcagccag
ccgtcccccatgatgccccgcgcatcagaccgtggacgtggagacaagggaaagatgaga
ccaaagagcgagggctttgagctctacaacaactctgtgcagaacggctcgcctgagagc
ccccaggaaacgtgggacacttatcctgaaccaaagaaggaggacaggttgttgaagaac
cgtgcagaccaccgctccagcccaaatgtggctaaccaggcccaaagtccgggtgggaag
cctgtttatcctggagccccaggaaagatcacttcggtctcgacgggtaacctctgccct
gatgaggagccctcaccaccccgtccagaggcatatccgatccccactcagacataccaa
agggaatacttcaccttcccagcctccaaatctcaggacaggatgggccctggccagccc
tggcaaaacaacgaactggagcctctcccccctatggataaccactctaacaacagcatg
gctatgcagcaggttgctcgctctcaggaggagttgtgcgacatgccgggcgggtaccca
ggtgaacacctgcgccaagaagacctgatgcccctgcagtaccagcgaggcggaggcgag
cactggaaccaccagatgtcctcctcggtggagtccagcacatcaagccaagaacacctc
aactactcatcatcctctggctccaggatccaaggcaatcacaagagtggccctggccgc
tggaagaccccaatacccaactccggccccgtgggcgtctcccaaccttcccgttcagat
cttccacctcctcctcctcctccgcctgcgcactatgactacgagccgcaaacagacctg
ccgcttcctccaccaccctccgttacacagcaacaggcagcagctgctgcggccacggcc
gaccgcaagaaacgcgaggagcaacagcgctggtatgagaaggagaaggccaggcttgaa
gaggagcgagagagaaagagaagagaccaggagcggaagttggtgcagattcgcaatcct
ccaggcccagtcatgcacaacaaccagcatggtccactgccgcccgcccctcagcaccaa
cagatgccccattcacagctccccatgcaggtgccccaaccgtaccttcccccggtccag
ccttcccaaccaccacagccacaacccgctcgacccgacaagctatccagccttccccgc
cagccgccacaggacacagtaatacgtgacctcttgccccagcaacagccacgcaccata
gaaagacgtgacttgcaatacatcaccatcagcaaggaggaactgtccgccagtgacagc
ctgtcgcctgacccctggaagagggatgcccgtgagaaactggagaagcagcagcagctt
cacatcgtggacctcctggacaaggagatccaggaccttcaggccaaacccgaacgcaca
gccgaggagaatgaccgtctgcgcaagctcatgctggagtggcagttccagaagagactg
caggagtccaagcagaacgaggaggatgaggaggaggaggatgacgaagatgtagacacc
acgctaattatgcagagactggaggctgagaagagagcacggctacaggacgaggagcga
cgacggaaacagcagttggaggaaatccgtaagcgtgaggcagaagagagagccaaacag
gaagaggagagacactggagagaggaggagagagccaggcgagaggccgaggagaagagg
agacaggagaaagagtactacacccgcctggaggcagagcggcgccggcagcacgaggaa
gccgagcgcaagctgctgacgccagacgagcctggtctgtacagaccccccctaccccgg
gactaccagcccccttctccctcaagcacccccgccactaacaacaacagtgcccctccg
cccccacctcagagaaacacctcctacctcaaaacccaggtcacctcccctgacaccatt
tacactgccaagtttgtctcgtacaatgatgaggaggaggaggatgaggaggacgcaggc
ctaacaggatttaattcatacactggaaacacaacaggactaggatccggagagatttac
aaggacccgcgagagaagtggacgaaaggcggcccagatcaggagaacacaataggagga
gctccagaaagcctgacatttaaggagcgccagagactcttctcaaagggaaaggaagtg
tcgaataaagtgaaagcgtcccggaagctcatggaactggagaacgagctgaacgtaaag
cagtag
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integrated database retrieval system