Cyprinus carpio (common carp): 109050141
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Entry
109050141 CDS
T05134
Symbol
lama1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109050141 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109050141 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109050141 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
EGF_laminin
Laminin_B
Laminin_N
Laminin_II
EGF_LMN_ATRN
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
109050141
NCBI-ProteinID:
XP_042570867
Ensembl:
ENSCCRG00000003453
UniProt:
A0A9Q9VTF6
LinkDB
All DBs
Position
A24:25345140..25398582
Genome browser
AA seq
3009 aa
AA seq
DB search
MKRRRMKVLWPFAVIFSSLVCVETQQRGLFPAILNLASNAEITTNATCGDPLPEMFCKLV
EHVPGRRIRNPQCRLCDANSQNPKEQHPITYAIDGTNQWWQSPSIKNGPQFHWVTTNTHS
LDARQVFQVAYIIIKAANSPRPGNWILERSLDGVDFQPWQYYAISDTECLTRYNITPRLG
PPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDLTPELLEFTSARFIRLRLQR
IRTLNADLMTLSYRDPKDVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVTKKLKC
VCEHNTCGESCNECCPGYHQEPWQPGTLSDGNTCEKCNCHNKAENCYYNQTVADLRLSVN
THGQLVGGGVCVNCSQNTAGVNCQTCADGYYRPHQVSPYADDPCVECQCDSRGSASPVCI
RDDNHSDPGAGLTAGQCLCKEGFAGEKCDRCAFGFRDFPQCTRCECNLAGSHNVDPCSEC
VCKVNVMGSNCDLCKQGFYNLQASNPEGCTECFCFGVSDVCESSTWFSSSVEHRDGVLLR
SLQSSSVFTSPVSDDNLIISNLSASVGVRSVRSVWSWAAPESFLNNKITSYGSFLNYSVA
YDTSEENVDRTLQAHFSVIIEDNNRTNPQPRSSHPPLSAHTEQRGSLRMLPHTLIDARSG
SRVQRDELMTVLADVAALRVRVQLEDSVEGTLRLSSVSLGVGDTNSGLSKIPLDVEQCEC
PWGYSGTSCEYCIPGFYRVGGILFGGNCLQCECNDHTSKYNINXDREXGLSLEQFFQXKE
AVKPSVCVCVCSLQGCAHNTTGPHCDHCMLGFYGDASEGTPDDCQRCACPLTLESNNFSP
SCVLQRPGEFTCDQCQLGYAGDKCDRCADGYYGDPAEPGRRCSACECNGNVDPAEAGHCD
GRTGECLKCLGHTGGLHCERCVHGFYGDAVTLKNCQACGCHGNGSLSTVCHVITGQCECK
VNVIGHTCDRCQAGYYGISSGDGCRLCECNQSGALSASCDEEGRCQCVTGVAGDKCERCE
RGYYSFTESGCTPCDCAHTHGNCNAHTGECICPPHTLGLKCEECEEGHWGHDGESGCKAC
NCSAEGSSSSQCDLQSGQCRCRQHFSGLRCDRCALGYKNFPECTACNCSPSGTREEFCDP
ALGVCGCPDHGRCSCKENVGGGGCDECKSGTFGLTAQNPAGCSPCFCFGVSSVCEELGGL
VRVPITLGSAPPLLRVVSQSDLQGTLEGVSYSDQEMLLDASHLHSLSILTAPYYWRLPHK
YHGNKLLSYGGRLSFTVVFSALDGVGLANHEPQVMMRGGHLRRLVIYTELPAPENGVRTR
HELPLTEHTWKYFNSVSDEAVSHADFMSVLSNLEYIIIKASYGSGLQQSRISNISMDTAL
EADEAPQGADVARLVETCECPLGYAGLSCQECAPGFYRQAVSELNVKGRSRPLMSCDLDT
GECLGIMGQGDAQKTKDNTAGRALPRVRLSRYYGILQGFSPDDLNSFVRLSTSGSETRAL
TLSPVSRRCSVGYYGNPSEPGGRCQVCRCSGAGSVHGVCDGRTGSCECKVGVRGHLCDQC
EERHVLVSEQCVSCDDGCTGVLLDDLDALDGSIASLNLSGVILAPYSQLMTLENQTREVK
SLMSWEQSTDYQLTAGEGGMCEQHDTITHHCIHGNRRRHSSVITTSTATQPPTDAVNVLL
ISEERFSQGKHQHVDLIKPHINISAIHGLMEQVRSVTVTESEGLDEMNNPRPSVTTHVPS
SRDTCAGKSSAGLQASVLDPTLSQEAPIRNESGRCSPSLRKHHEALVLDLTRRDVPQKMV
YRAEDYAQALTKQAQSLNGCVTLRDIPKPHTQTNTNLREHTQLAEDLAHAANQSASSALS
LTSETEQRKTALQKSSEILDTSRSLKNQTEGTHTHTHTHTHTSERSPHNLRNTQLLPEAL
NILRNLPNGSRAEVLEAKQQAEAANASVQEALERLQDYGVKLDESSSAVASANDSIRSTN
QLLRDSEMTAAAVRSRLSEAHLKTERLFDRLKPLQTAGENLSRNLSEIRELIHQARKQAA
SIKVAVSADRDCVRAYRPEVTSSNFNTLTLTMKTNQTNNLLYNISSHCASDFMALEMRHG
KVSFLWDTGSGHTRLEYPSVQINNDKWHRINATRFGRHGTLTVQQTDSEPLPAVKTTASG
SSSVMDVNKSTWVFVGGLGGQVKKPPAVRMTHFRGCIGEASLNENNIGLWNYAERQGECG
GCFMSPRTEDTSFHFDGSGFSVLEKSLRSMSTSVVMFFKTLSPNGLLLYLASNGTRDFLS
IELVEGKVHLTFELGSGALTMTSNRTYNTGTWYRIALQRNKRRGHLSVMAADNPSEREVM
EAESPGSSSDLNRSDLDPIYIGGLPASRPIRRQVVARSFVVCMKNVEIARTNFDLLRESY
GVKKGCVLKPIRSVSVFGGGFLQMPAVLVAPHTELMSSFSSRRERGVILAGFSRSAGRSR
RHTQQPFLLVMLVSGSLEVHVGVAEGGAVHRAVVKSQNGSFSDGQEHSLILQRNKRSIAV
FVDEQNQATVKLGSSADKPLALERLFIGGVPPGEGAALTGSSGSFYGCIRNTAVDGMLLD
LSSALRYEDVDMDSCLLEERPKRVVLPDELEAEPTSDPATRPLSPPVELSALTPGSSSCA
AADHTETIPESLQFGLSRHSHVIMGFKNKTVRTSFAVKLSVRTFARSGVLFYMANANQQD
YAVLQVQGGRLQLSCDLGKGPAHVTLTTPINDGLWHTVKAEFSKKTVMVSVDGTESDRTP
TKGHTLDVEGKLYLGGLPATYTARRIGNVTHSLAACVQDVMFSGVQMNLSAALSSHAAGS
CFRRAQSGSFFSGSGYAAFMKEGYNVGSDLTVSLDFRSTAPDGVLLGISSTKVDAIGLEL
VSGQVVFNVNNGAGRITARSRSAVSMCDGRWRTLVAKKQKHSLSLTVDGVTVTAENPYSS
STSAETKNPIYVGGYPADVKQNCLSSREPFRGCMRNLRVFKGHVSDVLDFSAAFAHPHVF
PHSCPDTAA
NT seq
9030 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaggaggatgaaggtgctgtggccgtttgcagtgattttctcctcactggtt
tgtgtggagactcagcagagaggtctgtttcctgctatcctgaacctcgccagcaatgcc
gaaatcaccacgaatgccacgtgtggtgacccgcttcccgagatgttctgtaaactggtg
gaacacgttccaggaagacggatccgtaaccctcagtgtcggctctgtgatgcaaacagc
cagaatcccaaagagcaacatcccattacttacgccatcgacggcaccaaccagtggtgg
cagagcccgagcatcaagaacggccctcagttccactgggtcacaaccaacacgcactca
ctagacgcaaggcaggtcttccaggtggcgtacatcatcatcaaagcagcgaactctccg
cggcccgggaactggatcctggagcgttctctggacggagtggacttccagccgtggcag
tactatgccatcagcgacaccgagtgtctgacccgatacaacatcacgccccgcctcggg
ccacccacctacaagagagacgacgaggtcatctgcacgtcctactactcacgcctggtg
ccgctggagcacggcgagatccacacgtctctcataaacggccgtcccagtgcagatgat
ctgaccccagagctgctggagttcacttccgctcgattcatccgcctgcgtctgcagaga
attcgaacgctcaacgccgacctcatgaccctcagctaccgcgaccccaaagatgtggac
cccatcgtcacccggcggtattattactccatcaaggacatctcggtgggcgggatgtgt
atctgttatggccacgcccagagctgcccctgggaccctgttaccaagaagctgaagtgt
gtgtgtgagcacaacacttgtggcgagagctgtaatgagtgttgccctggataccatcag
gagccatggcaacctggaacgctttccgacggaaacacatgcgagaagtgtaactgtcac
aacaaggctgagaactgttactacaaccagacggtggcagatctgcgtctgagcgtgaac
acacacggccagcttgtgggaggaggagtgtgtgtgaactgctctcagaacacagcggga
gtgaactgccaaacctgtgcggacggatactacagaccacaccaggtgtctccgtacgct
gatgacccatgtgtggagtgtcagtgtgactcgagaggttctgcgagtcccgtctgcatc
agagacgataatcactcggaccccggcgcaggtctgaccgccggtcagtgtttgtgtaag
gagggttttgcgggggagaagtgtgaccgctgtgcgtttggattcagagatttcccacaa
tgcactcgctgcgagtgtaaccttgctggaagccacaacgtcgacccctgcagcgagtgt
gtgtgcaaggtgaatgtgatgggctctaactgtgatctgtgtaagcagggcttctataac
ctgcaggccagtaatcctgagggctgcaccgagtgcttctgtttcggagtctcagatgtg
tgtgagagctccacctggttcagcagctcggtggagcacagagacggcgttctcctccga
tctctccagagctccagcgtcttcacgtctcctgtctcagacgacaacctcatcatctct
aacctctcggcgtccgtaggagtccggtccgtccggtccgtgtggtcatgggccgcgccc
gagtccttcctcaacaacaagataacatcatatggaagtttcctgaactacagcgttgct
tatgacacgtctgaggaaaacgtggaccggacgcttcaagctcatttcagcgtaattatt
gaggataacaaccgaacgaacccccagccacgctcctcccacccaccgctgagcgctcac
accgagcagcgcggctcgctccggatgctgccgcacacactcatcgacgctcgcagcggc
agccgcgttcagagagacgagctgatgacggtgctggcggacgtggctgcgctcagggtt
cgagttcagctggaggacagcgtcgagggaacgctcaggttgagttcggtgtctttaggt
gttggagacacaaactcgggtctctctaaaatccctctggatgtggagcagtgcgagtgt
ccgtggggttattctggcacttcctgtgagtactgtattcccgggttttatcgggtcggt
gggattctgttcggaggaaactgtcttcagtgcgagtgtaacgatcacacatcaaagtat
aacatcaactaagacagagaataaggtcttagtttagagcagttcttccagtgaaaggag
gctgttaaaccctctgtgtgtgtgtgtgtgtgttctcttcagggctgtgcgcacaacacc
acggggcctcactgcgatcactgcatgctgggtttctatggcgacgccagcgagggcaca
ccggacgactgccagagatgtgcctgtccactgacactggagtccaacaatttcagcccc
tcgtgtgtgctgcagcgtcccggtgagttcacgtgtgatcagtgccagctgggatacgca
ggagacaagtgtgacaggtgtgctgacggttactatggcgaccccgcggagccgggccgg
cggtgttcggcgtgtgagtgtaacggtaacgtggatccggccgaagcgggtcactgcgac
ggacgcaccggagagtgtctgaagtgtttgggtcacacagggggtctgcactgcgagcgc
tgcgtccacggtttctacggagacgccgtgaccctcaaaaactgccaggcctgtggttgc
catggtaacggctctctgtccaccgtgtgtcacgtgatcacgggtcagtgtgagtgtaag
gtcaacgtgatcggacacacctgtgaccgctgtcaggcgggttattacggcatcagcagc
ggcgatggctgcagactgtgtgaatgtaaccaatcaggcgctctgtctgcgtcatgtgac
gaggaggggcggtgccagtgcgtcactggagtggcgggtgataaatgtgagcgctgtgag
cgcggatactacagcttcaccgagagcggatgcacaccgtgtgactgcgcacacacacac
gggaactgtaacgcacacacaggagagtgtatctgtcctccacacacactcggcctgaag
tgtgaggagtgtgaggaaggtcactggggtcacgacggcgagtccggctgcaaggcgtgt
aactgcagtgccgagggctcgagttcgtctcagtgtgacctgcagtcgggtcagtgtcgc
tgcaggcagcacttctccggtctcaggtgcgaccgctgcgctttgggctacaaaaacttc
ccagaatgcaccgcctgcaactgcagccccagcggcacgcgagaggagttctgcgacccg
gcgctgggagtgtgtggatgcccggatcacggccgctgctcctgcaaggagaacgttggc
ggcggcggctgtgacgagtgtaagagcgggacgttcggtctgacggcgcagaatcccgcc
ggatgcagtccgtgcttctgtttcggtgtgtccagcgtctgcgaggagctcggcggattg
gtccgagtgccgatcacgctgggctctgctccgcctcttctgcgtgtcgtgtctcagagt
gacctgcaggggacgctggagggcgtttcgtacagcgatcaagagatgctgctggacgcg
tctcacctccacagtctgtccatcctcactgcgccgtattactggagactcccacacaaa
taccacggtaacaagctgctgtcgtacggagggagactgtccttcaccgtggtgttctcc
gctctggacggcgtgggtctggccaatcacgagcctcaggtgatgatgaggggaggacac
ctgcgcaggctggtcatctacaccgagctccctgcgcctgagaacggcgtccgcaccaga
cacgagctccctctgaccgagcacacgtggaagtatttcaactctgtgtctgatgaagcc
gtgagtcacgcagacttcatgtcagtgctgagtaacctggagtacatcatcatcaaagca
tcgtacggctcaggactgcagcagagcaggatctctaatatctcgatggacacggcgctg
gaggcggatgaggctcctcagggagcagacgtggcgcggctggtggagacgtgtgagtgt
ccgctgggatacgctggactctcctgtcaggagtgtgctccggggttttaccgtcaggcc
gtgtctgagctcaacgtgaagggcagaagccgtccgctcatgtcatgtgacctggacacg
ggcgagtgtctgggtattatgggtcagggtgatgcacaaaaaacgaaggacaacaccgca
ggaagagcactgccacgtgtgcggctcagcaggtattatgggattctgcagggattttca
ccagatgacttgaatagttttgtgcgcctgtccacttcggggtcagagactcgtgcacta
actctctctcccgtgtcccgcaggtgttcggtgggttactatggtaacccgtctgagccg
ggtgggcggtgccaggtgtgcaggtgcagcggggcggggtcagtgcacggcgtctgtgac
ggacgcaccgggagctgcgagtgcaaggtcggggtcagaggtcatctgtgtgaccagtgc
gaggagagacacgtgctggtcagcgagcagtgtgtgtcgtgtgatgacggctgcaccgga
gtgctgctggacgatctggacgctttagacgggtccatcgcctctctgaacctgtcgggg
gtcattctcgcgccctacagccagctgatgaccctcgagaaccagaccagagaggtcaag
agtttgatgtcatgggagcagagcacagattatcagctgaccgcaggagagggagggatg
tgtgagcaacatgacactatcacacatcactgtatccatggcaaccgccgacgacactcg
tccgtcatcaccacatcaaccgcaacccaaccgccgactgatgctgtgaatgtgctgctg
atctcagaggagagattctctcagggcaaacaccagcatgtggacctcatcaagccacac
attaacatttctgccatccacggtctgatggagcaggtgcgttcagtgacggtgacggag
agcgagggtctggatgagatgaacaatcccagaccgtcagtcacgacacacgtgcccagc
tccagagacacttgcgcaggaaagagctcagcaggtctgcaggcgtctgtgctggatccg
acactctcccaagaagccccgatcaggaacgaatctggaagatgcagtccgtctctcagg
aagcaccatgaggctttagtgctggacttgaccagaagagacgtcccgcaaaaaatggtg
tacagagccgaggactacgcacaagccctaaccaaacaggcacaatctctgaacgggtgc
gtgaccctccgagatatccccaagccccatacacaaaccaacaccaacctcagagaacac
acacagctggctgaagatctggcccacgccgccaatcagagcgctagctccgccctcagt
ctgacgtctgagactgagcagaggaagacagcgcttcagaagagctcagagattctggac
accagcagatccctgaagaaccagacagaaggtacacacacacacacacacacacacaca
cacacaagcgagcgttccccccataacttacgtaacacacagctgctcccagaagccctg
aacatcctgaggaaccttcctaatggcagcagagctgaagtcctggaggcgaagcagcag
gcggaagcagcgaatgcatctgtacaggaggctctggagcgtctgcaggattatggtgtg
aagctggacgagtcgtcttctgctgtggcctcagctaatgacagcatcaggagcactaac
cagctgctcagagactcagagatgaccgccgccgcggtcagatccagactgagcgaggct
cacctgaagaccgagcgtctgtttgaccgtctgaagcccctgcagaccgctggagagaac
ctgagcagaaacctgtcggagatccgagagctgatccatcaggctcgcaagcaggcggcg
tcgattaaagtggccgtttctgccgaccgggattgtgtgcgagcgtacagaccagaggtg
acgtccagtaacttcaacacgctcacactgaccatgaagaccaaccaaacgaacaacctc
ctctacaacatcagcagccactgcgccagcgattttatggctctggagatgcgtcatggg
aaggtgtctttcctgtgggacaccggctctggacacaccagactagagtatcccagcgtt
cagatcaacaacgacaagtggcacaggatcaatgcgacccggtttgggagacacgggacc
ctcaccgtccagcagacggactctgagccgctgcccgcagtgaagaccacagcgtccggc
tcctccagcgtcatggacgtcaacaaatccacctgggtgttcgtggggggcctcggcggt
caggtgaagaaacccccagcggtgagaatgacccacttcagaggctgcattggtgaagct
tcgctcaacgagaacaacatcggcttgtggaactacgctgagagacagggagagtgtggc
ggctgcttcatgagtccacgcactgaagacacgtcgttccacttcgacggcagcggtttc
tctgtgctggagaagtccctgcgctccatgtccaccagcgtggtcatgttcttcaagact
ctctctcctaacggcctgctgctgtatctggcctccaacggcaccagggacttcctgtcc
atcgagctggtggaagggaaggttcacctgacctttgaactgggatccggagcgctgacc
atgacctccaacagaacatacaacaccggcacctggtacagaatcgccctgcagaggaac
aagcgcagaggtcatttgtcggtgatggccgctgataacccctctgagcgagaggtcatg
gaggcggagtcaccgggttcatcctctgacctcaatcgctccgacctcgaccccatctac
atcggtggattaccggcctctcgaccaatcaggaggcaggtcgtggctcgctctttcgtc
gtctgtatgaagaacgtggaaatcgctagaacaaacttcgacctgctccgagagtcgtac
ggagtgaagaaaggctgcgtcctcaagcccatccgcagcgtgtcggtgttcggcggaggt
tttctgcagatgcccgccgtcctcgtggctcctcacacggagctcatgagcagcttctcc
agcagacgagagcgcggcgtgatcctggcgggattcagcaggagcgcgggacgctcgcgg
cgacacacacagcagccgttcctgctcgtgatgctggtgtccggatcgctggaggttcac
gtgggcgtggccgagggcggggccgtgcacagagcagtcgtcaaatcacagaacggctcc
ttcagtgatggacaggagcattcgctcatactgcagaggaacaaaaggtccatcgcagtg
tttgtggacgagcagaaccaggcgacggtgaagctgggctcgtctgctgataaacctctg
gctctggagcggctcttcatcggcggcgttcctccaggagaaggtgctgcgctcacggga
tccagcggctccttctatggctgcatcaggaacacggcggtggacggcatgctgctggat
ctgtcctctgctctgcgctatgaggacgtggacatggacagctgtttactggaggagaga
cccaaacgtgtggttctgcctgatgagctggaggcggagccgacctctgaccccgccacg
cgacccctgtcacccccggtggagctgagcgcactcacacccggcagcagcagctgtgcg
gcagcggatcacacagaaaccatcccagaatccctgcagttcggtctgtcccgacacagt
cacgtgatcatgggcttcaagaacaagaccgtcagaaccagttttgcggtgaagctgtcg
gttcggacgttcgctcgcagcggcgttctcttctacatggccaacgcaaaccagcaggat
tacgccgttctgcaggtgcagggggggcgtctgcagctgtcatgtgacctggggaaaggc
cccgcccacgtcacgctgaccacacccatcaacgacggcctctggcacaccgtgaaggcc
gagttcagtaagaagacggtgatggtcagtgtggacgggactgaatctgaccgcacaccc
actaaaggacacacgctggacgtggaggggaagttgtacctcggcggacttcctgccaca
tacacggccaggagaatcggaaacgtgacacacagtctggcggcgtgtgtgcaggacgtg
atgttcagcggcgtccagatgaacctgagcgctgcgctgtcgtctcacgccgccgggtcc
tgcttcagacgcgctcagagcggcagcttcttcagcggcagcggatacgccgctttcatg
aaagagggctataacgtgggctcggacctcaccgtcagtctggacttccgctccacggcg
ccggacggggttctgttgggaatcagcagcactaaagtagacgccatcggcctggagctc
gtcagcggacaggtggtgtttaacgtgaataacggcgcgggccgcatcacggcgaggagc
aggagcgctgtgtccatgtgtgacggccgctggcggaccctggtggccaagaagcagaag
cacagcttgagtctgaccgtagacggcgtgacggtgaccgcggagaacccgtactcttcc
tccacctcagccgagaccaaaaaccccatctatgtgggcggatacccagcggacgtgaag
cagaactgtctgagctccagagagccgttccgcggctgcatgaggaacctgcgtgtcttt
aagggtcacgtctccgatgtgctggacttcagcgccgccttcgctcatccgcacgtcttc
cctcactcctgcccggacaccgctgcttaa
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integrated database retrieval system
