Cyprinus carpio (common carp): 109050234
Help
Entry
109050234 CDS
T05134
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109050234 (trpa1b)
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109050234 (trpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
109050234
NCBI-ProteinID:
XP_042608084
Ensembl:
ENSCCRG00000011567
UniProt:
A0A8C1ILN8
LinkDB
All DBs
Position
B24:10250225..10334895
Genome browser
AA seq
1108 aa
AA seq
DB search
MQFGKEFVRRNSFYKCVINEEETALDSADVFELAFKGKASAIDHRSQKSPEQLSFRDENG
ASPLHYASAGGNVDIIRLIVSVVGPEELNVQDEQGRTPLHWAVEQNQQQSCVLLLELGAD
PNILNNAMMGPLHLAVTKRYNHLVEVLFQSCDKTDANLEGDLGNTPVMMACCTNNCQAIQ
FLFKHGAKMCIQNKLGHYAIHTVAFAGAKEAMEMVLEIGEELGISTSVHINYLDKTKSTP
LHLSVRGGNIEVIKLCIIKGARVDQQQCDKSTALHFACTQGALEAVKIMLSSYNKVEDII
NIRDGANQTPLHRATLFDHVELAEYLISKGAEIDCTDCKGLSPLLLASKCCAWKTVAFLL
SVGADFRIKDEAGRNFLHFVVLQPKGLKNLPETILQCNAVKEMLSDEDVEGCTPLHYACK
LGIHDSVKNMLGLNIFVGQKSREKKSALHFAAEYGRINTCKRLLETLTDSKMLNDWDEKG
LTPLHLASRAGHTQVVELLLRSGALFQSDYKGWSCLHHAVAEGYTQTIKILLSANVKLLD
ETNEDGNTALHIAAQVGHVGAVLLLLERGAEITLNNADNSFLHEAVRNERKDVVNAIIEN
ERFAEAIKSFKTTSRCAVMDIIEFLPESFRHLLDRCILESDHDANSSDYHITYDFRWLQA
PIQLKKYAKTDKSMKYQPLAAMNAMVRCNRLELLTHPVSRKYLEMKWKAYGSKVHLLNLA
VYLLGLLPLTYLILNLRPKQDVFGNSTSVIMVPVSFREQKSLISVCIIMVLVLNVYSVCK
ELVQLAQQQVNYFTDFSNLADWCAAISSLVFVIPMCFNLENTWQWEAGAFAILTSWIGFL
LYFQRFERIGIYVVMFGGIVRTLVCIMILFIFLLLAFGLAFYALMLHQDEFSSISLALAQ
TFVMTVGELNYQSIFLNAYENNRMAFPGVTYFIFVLFVLFMPILLMNLMIGLAVGDIAEV
QRNAELKRIAMQIDLHTALEEKLPYWFLKRVDKPSITIYPNKCKKVLMQALIDGEIQNTV
RTRLNLCSRQGGPLERELHKQKNRLKTMSCLLEKQHNLLKLIIQKMEITSEADEYDGPHN
PRALKQPTSSSSQKSKWVPLLQAIRTKK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttggaaaggagtttgtgaggcgaaacagcttctacaaatgtgtgataaatgag
gaggaaacagccctggattctgcagatgtgtttgagttggcattcaaagggaaggcctct
gccatcgaccaccggagccagaaaagtccagaacagctaagcttcagggatgagaatgga
gctagtcctctacactatgcttcagctggaggaaacgtggacataattcgcctcattgtt
tctgtcgtgggccctgaggagctgaatgtacaggatgagcagggcagaactcccctgcac
tgggctgtagagcagaatcaacagcaaagctgcgtgttactgctggagctgggcgctgac
cccaacatcctcaacaatgccatgatgggccctctgcatctggctgtcacaaagagatac
aatcatctagtagaggtcctctttcagtcctgtgacaaaacagatgccaatctggagggg
gatctgggaaacacccctgtgatgatggcctgctgcactaataactgccaagctattcag
tttcttttcaaacatggtgccaagatgtgtattcagaacaaattgggtcactacgctatc
catacggttgcttttgcaggtgccaaagaggccatggagatggttttggaaattggagaa
gaactgggcatttccacttcagtgcacattaattatttggataaaaccaaaagtaccccc
ctccatctgtctgtacgtgggggcaacattgaggtgatcaaactttgcatcattaaagga
gccagagtggatcagcaacagtgtgacaaatccacggccctccactttgcctgcactcag
ggtgctctggaagccgtcaaaatcatgctttcttcttacaacaaagtggaagacatcatc
aacatcagggatggagccaatcagacccccttacatagagccacgttgtttgatcatgtc
gagttggctgaatatcttatttcaaagggagcagaaattgactgcactgactgtaaggga
ctgtctcctctgctgttagcctccaaatgctgtgcttggaaaacagttgcatttttgctg
tcagttggtgccgatttcagaatcaaagatgaagcaggtcgcaacttcctccactttgtc
gttcttcaaccaaaagggctgaaaaatcttcctgagacaatcttacagtgtaacgccgtg
aaggagatgttgtctgatgaggatgttgaaggctgcactcctctgcactacgcctgcaaa
cttggcatccacgattcggtcaaaaatatgctgggtctcaatatctttgtgggtcaaaag
tcacgggagaagaaatcagctcttcactttgctgcagaatatgggcgtataaacacatgt
aaaaggctgctggagaccctcacagactctaaaatgctgaacgattgggatgaaaagggt
ctgacgcccctccatcttgcttcaagggcaggacacactcaagttgtggagctgctgctc
agaagtggtgcgctttttcaaagtgattacaaaggatggtcctgtttacatcatgctgtg
gctgagggatacactcagacaataaaaattctcctgtcagccaatgtcaaactactggac
gaaacgaatgaggatgggaacacggctcttcacatagctgcacaagtgggacacgtaggt
gccgttttgctgttattggagagaggagctgaaatcactctcaacaatgctgacaactct
tttttgcatgaagctgtgcgtaatgagagaaaagatgtagtgaacgctattatcgaaaat
gagaggtttgctgaggcaataaaatcatttaaaacaacatcccgctgtgccgtgatggac
atcatagagtttcttccagagtctttcaggcaccttctggatcggtgtattttagagtct
gatcatgatgccaacagttcagattatcacatcacttatgatttccggtggcttcaggct
cctatacagctgaagaagtatgccaaaacagacaaatcaatgaagtaccaacctttggca
gctatgaatgccatggtgcggtgcaaccgtctggagctcctcactcaccccgtgagccga
aaatacctggagatgaagtggaaggcgtatggaagcaaggttcatttgcttaacctggct
gtctacctgcttggcttgttgcccctcacatacctcatcctcaatctgagaccgaagcag
gatgtttttggcaacagcacttctgtcatcatggtgcccgtatcttttagagagcaaaaa
tctttaatctcagtctgtataatcatggtgcttgtcttgaatgtgtattccgtttgcaaa
gagctggtgcagttggctcagcagcaagtaaattacttcacggacttctcgaaccttgct
gactggtgtgcagctattagctctttagtctttgtcattcccatgtgcttcaatctagag
aacacttggcaatgggaggcaggagctttcgccattctgacatcatggatcggcttcctg
ctctactttcagaggtttgagcgaattggaatttacgtggtgatgtttggtggaatcgtt
aggaccctggtgtgcatcatgattctctttatcttcctcttactcgcatttggattggcc
ttctatgctttgatgctccaccaggatgagtttagctccatcagccttgctctagcccag
acgtttgtgatgacagtgggagagctgaactaccagagcatatttctgaacgcttatgaa
aacaaccgcatggcgttccctggggtcacctattttatttttgtgctctttgtgcttttc
atgcctattcttctcatgaacctaatgattggtttggcagtaggagatatcgcagaggta
cagagaaatgcagagttgaagagaatagccatgcagatcgatcttcacactgcccttgag
gagaagctaccttactggttcctgaagcgagtggacaaaccatctatcaccatctacccc
aataaatgcaagaaagtgctgatgcaggcgctcattgatggtgagatccaaaacacagtt
cgcacccgtctgaacctctgctcacggcagggagggcctctggagagagagctgcacaag
caaaagaacaggttgaaaacgatgtcctgtttgctggagaaacagcataacctgctcaag
ctgatcatccagaagatggaaatcacttctgaggctgatgaatacgacggcccacataac
cctagagctctgaaacagcccacttcctcctcatcacagaagtcaaagtgggtcccgctg
ctgcaagccattaggacaaagaagtaa
DBGET
integrated database retrieval system
