Cyprinus carpio (common carp): 109050243
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Entry
109050243 CDS
T05134
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109050243 (sbno2a)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109050243 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
MRP-L20
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109050243
NCBI-ProteinID:
XP_042569219
Ensembl:
ENSCCRG00000020152
UniProt:
A0A9Q9VQC6
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All DBs
Position
A2:complement(26845547..26878350)
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AA seq
1346 aa
AA seq
DB search
MPTLATSVVMETEDYLDPEGPPLGSPKFGALSSPLTSSMESQLCPSNSWMYPQPTQYNQH
YPMQSGRQLQLNPSSGLDLSDIDFHDLVQNGDYSQDLCIDMLSNTSLFSSASDSLSEYPD
PSGFGSDSLSQRPPEGPVAQMHWDIPGQSQRPQNLSAFHGRFDDFSTILPASVTGFKAAA
APPPPEEEEEADEEETEDLGHADTYAEYKPSKSNIGISHPDIVVETNTLSSVPPPDITYT
LSIPDRTVSSGLLSALQLEAIIYACQQHEVILQNGQRAGFLIGDGAGVGKGRTVAGIILE
SFLKGRKRALWFSVSNDLKYDAERDLRDIDAPNIPVFALNKIKYGDMATSEGVLFATYSA
LIGESQAGGQHRTRLKQILDWCKPNFDGVIVFDECHKAKNATSTKMGKAVLDLQNKLPRA
RVVYASATGASEPKNMIYMSRLGIWGQGTPFKTFDDFLHAIEKRGVGAMEIVAMDMKVSG
MYIARQLSFSGVSFRIEEITLDEQFKLVYNKAARLWAEALVLFTGAAETLGLASRKSLFS
HFRHTKHIFNKYLCIAAKVRRLVEIAYTELQQGKCIVIGLQSTGEARTREVLDENDGHLD
RFVSAAEGVFQSLVQKHFPTQKPKREKSAASKRKRKPRSRPSKFPKHCVEVGGVIKISDD
SDSDSDEIDSYSNSSPESLQDNDDVIFLNHINGPTAKLEELKLRLLGKIAELGKELPLNT
LDELIDRFGGPEKVSEMTGRKGRVVRRPDSSVRYETRAEQGLSIDHVNIREKERFMTGEK
LIAIISEAASSGISLQADKRVQNRRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYI
FLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDKITKAI
LRQIDNKVPPPKGYPGGDIMFFRDMKQGMIDVGIFCKEPRLSQNTERDCSITKFLNRILG
MEVHHQNSLFQYFTDNFDYLINKDKKEGKYDMGILDLAPGNDEIHEETQEKFLTPGNPQE
GQVILYKISVDRGMPWEEACSKAEKLTGDYEGFYLSNKLRGNQPCVLLAEQGRGRNFILY
KPNIGKQAHPENLDNLLLRYYKVTPDEAKDFWESQFVFSFTNCTHANWKGKCKMIEQGQE
CFLGMRLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKQNSKQVGIKIPENCV
SRVRTELLRMDEEVKKARREREKLANEKHMQQEMLAKMIIANPPPSLQNHLHYPRSFLPP
AAKPKSEAISEVLDLTISPCPSPDIKTPVLDLNGMSLHGRMLGGRGRPFAVVPETYNLED
LISQEQQRHRQVALNPNCACRRRMPL
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgcccactcttgccacgtctgttgtcatggaaacggaggactatctggaccccgagggc
cctccgctggggagcccgaagttcggcgctctcagttctcctctcacaagttccatggag
agtcagctgtgtccgtcgaactcatggatgtacccacagccaactcaatacaaccagcac
tatcctatgcaatctgggaggcagctccagctgaacccgtcctcgggtctggacctatcc
gacatagactttcacgaccttgtgcagaacggagattactcccaggatctgtgcatagac
atgctgtccaacacatcgctgttctcctcggcatctgattctctgtcggagtatccagac
ccttcaggatttggcagcgatagcctgtcacagagaccccccgagggccccgtggcacag
atgcactgggatatacctggacaaagtcagagaccgcagaacctgagcgcgtttcacggg
aggttcgacgacttcagcactatcctgcctgcgtcggtcacaggatttaaggctgctgct
gctccgccgccaccggaggaagaggaggaggcagatgaggaagagacggaggatttgggg
catgctgacacatacgcagaatacaagccatccaaatctaatataggaatctctcaccct
gacatcgtggtggagaccaacacactgtccagcgttcctcctcctgacatcacctacaca
ctgtccattccagaccgcaccgttagctccggcctgctgtccgccctgcagctggaggcc
atcatctacgcctgccagcaacacgaggtgattcttcagaacggtcagcgggcggggttt
ctgatcggagacggagccggcgtcgggaagggccgcactgtggccggaatcatactggag
agtttcttaaagggacggaagagagcgctgtggttcagtgtgtcaaatgacctgaagtac
gatgctgagagagatctcagagacatagacgctcccaacatccccgtgtttgctttaaat
aagattaaatacggagatatggctacctcagagggcgttttattcgccacatactcagcg
ctgattggagagagccaggccggcgggcagcaccgcaccagactcaaacagatcctggac
tggtgcaaacccaactttgatggagtcattgtgtttgacgagtgccataaggctaaaaac
gcgacctccacaaagatgggtaaagctgtcctggacttgcagaataaattgccccgggcg
agagtggtgtacgctagtgccacaggtgcttctgagccaaagaatatgatatacatgagc
cgactggggatctgggggcaaggaacgccgttcaagacgtttgatgacttcctgcatgct
attgagaagaggggtgttggcgccatggagattgttgccatggatatgaaagtgagtggc
atgtatatcgcacggcagctgagcttctccggcgtgtccttccgcatagaagagatcacg
ctggacgaacagttcaaactggtctacaacaaagccgctagactgtgggccgaggctctc
gtgctgttcaccggagctgcggagacgttgggtctggcctcccgtaagtctctgttcagt
catttccgtcacacaaaacatatttttaataagtacctctgcatcgccgctaaagtccgt
cgtctggttgaaatcgcttatactgagctgcagcagggcaagtgcatcgtgattggcctg
cagtccactggagaggctcgtactcgagaggtcctggacgagaacgacggacacctggac
agatttgtctccgctgctgagggggttttccagtcattagttcagaaacacttcccaaca
cagaaacctaaaagagagaaaagcgccgcaagcaagaggaaacgaaagcccagaagccgg
ccttcaaaatttccaaagcactgtgtggaagtgggcggggttattaaaatcagcgacgac
tcagactcggactcggatgagattgacagctactctaactcctcccctgaatcgctacag
gacaatgacgatgtgattttcttgaaccacatcaacgggcctactgctaaactagaagaa
ctcaagctgaggttgctgggaaaaatagcagagctggggaaagagctgccgctcaacact
cttgatgagctgattgacaggtttggaggaccagagaaggtttctgagatgacgggccgt
aagggacgtgtagtgcggcgtcctgacagcagcgttcgatacgagaccagagcggagcag
ggcctgtccatcgaccacgtcaacatcagagagaaagagcgcttcatgaccggagagaag
ctgatagccatcatctctgaagcggccagttcgggcatctctctacaggcggataaacgc
gtgcagaaccgcaggagacgagttcacatgaccttagagctgccgtggagcgccgaccgc
gccatccagcagttcggtcgcacgcatcgctcgaatcaggttacagctccagagtatatc
ttcctcatctcagaacttgctggagagagacgcttcgcctctatcgtcgccaagagattg
gagagcctgggggcgctgacacacggggaccgacgagccactgaatccagagacctgagc
cagtacaactttgagaacaaatacggcaccaaagcgctggataagatcactaaagccatc
ctcaggcaaatcgacaacaaagtgcctccaccgaagggctacccaggaggagacatcatg
ttcttcagagatatgaagcaaggcatgattgatgtgggaatcttctgtaaggagccgcgt
ctaagtcagaatacagagagagattgctccatcactaagtttctgaaccgtattttgggt
atggaggtccatcatcaaaactctctgttccagtacttcaccgataacttcgactacttg
atcaacaaggataaaaaagagggaaaatatgacatggggatattggatctcgctcctggt
aatgacgagattcacgaggaaacacaagagaagtttctaactccgggaaaccctcaggag
ggccaggtcatcctctataagatcagtgtggatcgtgggatgccctgggaagaggcctgc
agtaaagcagagaaactcactggggactatgaaggtttttacctctcaaacaagctgcgc
gggaatcagccgtgtgtcctgctcgccgaacagggtcggggtcggaattttatcctgtat
aagcccaacatcggcaaacaggctcatcctgagaacctagacaacctgctcctgagatac
tacaaggtgacacctgatgaagcaaaggatttctgggagagtcagtttgtcttttctttc
accaactgcacgcatgccaactggaagggtaagtgtaagatgatcgagcagggccaggag
tgttttctggggatgcgtctcagacagtatcacatgctgtgtggagcactgctgagggtc
tggaaacgagtgtctgacatcgtctcggacatcaccaactccagcatcctgcagatcgta
cggctcaaaaccaaacagaacagcaagcaagttggtataaaaatcccagagaactgcgtg
tcccgtgtgcgcactgagctattacggatggacgaggaggtgaagaaagcacggcgggag
agagagaagttagcaaatgagaagcatatgcaacaagagatgctggccaagatgatcatc
gcaaaccctcctccctcccttcagaaccaccttcactacccacgatcctttctgccgcct
gcggcgaagccaaagagtgaagccatcagcgaggtcttggatctaaccatcagcccctgc
ccatcgccggacatcaaaacgcctgtgctagacctaaacggcatgtctctacatggacgc
atgctcggcgggagaggacgcccgtttgcggttgttcccgagacgtacaacttggaagat
ttaatctcccaggagcagcagagacacagacaggtggcgctgaacccgaactgcgcatgt
cgtcgtcgcatgccactttga
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