Cyprinus carpio (common carp): 109050558
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Entry
109050558 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109050558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109050558
03021 Transcription machinery [BR:
ccar03021
]
109050558
03036 Chromosome and associated proteins [BR:
ccar03036
]
109050558
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
ARID
109050558
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109050558
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109050558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109050558
NCBI-ProteinID:
XP_042628758
UniProt:
A0A9Q9YYJ5
LinkDB
All DBs
Position
A16:14090308..14114779
Genome browser
AA seq
2273 aa
AA seq
DB search
MAAQVASATSLNTSPPSELKKPDRDPKEESVPGEKHQENKEPGLESGSPARGELQDRADV
GNAGGGGESEMKNGNGNPSRVNNNQNDTTGPEGNNHPGMVHHHAPGFQSASYSYVQHYSR
APFHQHGGQQSPGMAAAAGPGALSSNMMDPYQPNSHEHGFPNHQYNSYSPFGNRSPYPAQ
SYGMNSPRSAPQAQAVGGQSAKQQQPAAAAAYSNQRYNMGNPQPTSTPTLNQLLTSPSSA
RGYPSYPPSDYNSQDGAKGPADMGSSSGQYGGGHPGWQQRTHHPPPMSPGSTGQPLGRNQ
TPGSMDQMGKMRGQPYGSGGPYSQQPHQGPPTGPQQGPTYPGQGYGPPGPQRYPMGMQGR
MQYSQQMPSYGQQGPGGYVQQGQQPYYGQHGQGSHSGQQQSPYPQPSSGQPGGQXPYSQQ
PHVPQSSGPHGQAGPPYQQPHMPQGQMTGPSPGPSQSPYSQSSAAPQSAQSPYPQQQVPQ
SQPSQQGSSQAPPASQPSYPPGQGPQQQQQQQPPPPSQQPPQTPTPASQPPAGHGQMPQG
QPTSYSQNPPQQQQQQQQQQQSPFQRFPPPPQEISQESFSSQSSAPPSGPPLASKSSTED
IQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPPVGS
PASASASRSGPLSPATIPGNQMPPRPSSGQSDGMMHPSMNQPGLGQERGYMQRNPPMAPY
GSPQSSSALSPRQSSGGQVHAGMVPYQQNNSMANYGPQGAQYGPQGYPRQPGYSGMPNAN
YPGPGMGGSMNPMSGQGGGPMFAGMPSARMPHGQMGARPFGPNMGPNMGPNMSPSMGPNM
ANMPPQVGTGMCPPPGLNRKPQDVTSMQHGPANSIHNRLPGYPNMSPGPGMMGSGPPYGP
SMNNMPGMMNTQGSPYPMANNTSGMSPGPDFGMDGKLNQAQKMNNKVEGTPKTESKSKKS
SSSTTTNEKITRLYELGPEPERKMWVDRYLAFIEEKAMGMSNLPAVGRKPLDLFRLYVSV
KEIGGLTQVNKNKKWRELSTNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIM
CVDSKKNQAKIQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKPPTPASTPHSQMTPIPSG
RSSVNLQDPFADSDFSRRNTLTPNSGYQSGMSTPEMPGRMGPYEPNKDHFGGMRKVGEQF
MPGGQGPNSSLGDQYNRGAPGPIGNLPMGQRHQYPYGPSYDRRPESGIGPDGSMGPGVPQ
PNMMTSNAESGMYSPNRYPPQQQRHESYSNQYPGQGAPPGGSYPNQQPGMYPQQQSNYKR
PADGGYPPAKRHHDGEMFSGPYNAQQTQPPAQAPPSGPSSGQEIYNQYNSSYPGSDRRPP
GPQNQFPFPFGRDRMQAATGPNSQGSMPPQMIGSPLQSGPDGPQGGMWQGRGDMSYPSYP
NRQGPPTGPGQGPGYHAMNRSEDMMPSEPRMNHEGQWPGPRQPPYGPSGTGPPMSRPLQS
NYQSPQTMQNHIPQVSSPTPMPRPMESRTSPSKSTYIPSNIKMQKAGPPVPASHIVPSSV
QPPMMRRDLSFPPGSIEATSPVLKSRRRLTMKEIGTPEAWRVMMSLKSGLLAESTWALDT
INILLYDDNSISNFNLIQLPGFLELIVEYFRRCLIEIFGILREYEVGDPGQRALLDPSVL
KNEENTVDDEALVEGMEEDGDTEEEDEGEEIHRSKHQELIAQGPLQIKQEEKPRTLEDSV
KKEDCQAIEGESSAEPKTSEPPCLELAVTQEKPKQASKFDKLPVKIVRKKDPFVVDCSNK
LGRLQEFDSGLLHWSIGGGDTTEHIQTHFESKMDLLHQRKRLPAQIPDRKRGAQAHSLPS
SSEERGKEVELQPSPESSTEKVTNGISDLRDERPADCLETASEGTSHFEKDQENQVTETT
TSENIRPAAPSPSLQGQRSIAILEDEPHSKDEAPLVTLSDWQDSLARRCICVSNIVRSLS
FIPGNDSEMSKHPGLLLLLGRLLLLHHQHPERKQAPLTYEKEEEVDESLGSKKDEWWWDC
LEVLRENCLVTLANISGQLDFSVYTESICLPLLDGLLHWAVCPSAEAQDPFPSLGLNGAL
SPQKLVLETLCKLSIQDNNVDLILATPPFNRLEKLFGNLVRLVGERKVPVCREMAVVLLA
NLAQGDSLVARAIAVQKASVGNLLGFLEDSLAATQFQQSQGSLLHMQGSHFEPTSVDMMR
RAARALLALAKVEENHSEFTLYESRLLDLSVSPLMNSLVSNVICDVLFLIGQS
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctacctctctcaacaccagcccgccttccgagctgaaa
aaaccggatcgagacccaaaggaggagtcggtaccgggggagaagcaccaggaaaataag
gagccgggactagagagtggatctccggctcgcggggaactgcaggaccgggccgatgtg
ggaaatgctgggggaggaggggagtcggagatgaagaacggcaacgggaatccgtcgagg
gtgaacaataatcaaaatgataccaccggaccggaagggaacaaccaccctgggatggta
caccatcacgcgcccgggtttcagtcagcttcctatagctacgtacagcactacagccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggcca
ggcgcgctgtcgagcaacatgatggacccctatcagcccaactcccatgaacacggcttc
ccgaaccaccagtacaacagctacagtccgttcgggaaccgaagcccgtacccggcccag
agctacggcatgaactctccgcgcagcgctcctcaagctcaggcggtaggggggcagtca
gccaagcagcagcagccagcagcggctgcagcttacagcaatcagcggtataacatggga
aacccgcagccaacatccaccccgactctcaaccagctgctcacctcaccgagcagtgcc
cggggctacccgagttacccgccgagcgactacaacagccaggacggtgctaagggacca
gcagatatgggcagcagcagcgggcagtacggtgggggccatccgggttggcaacaaagg
acccatcacccgccacccatgagtcctggaagtactgggcagcccttgggtagaaaccag
actccaggctccatggatcaaatggggaaaatgcgtggccagccttatgggtcaggtggt
ccttactcccaacagccccatcaggggcctcctacagggccccagcaggggcctacttac
ccaggccagggatacgggccccctggccctcagagataccctatgggcatgcaagggcgt
atgcagtacagccagcagatgccatcatatggacagcagggaccaggcggttatgtgcaa
caggggcagcagccctattacggccagcacggtcaggggtctcattcaggccagcagcag
tcgccatacccccagccttcctctgggcagccaggaggtcagnnaccttattcacagcaa
cctcatgtcccccagtcatctggcccacatggacaggctggccctccttaccaacaaccc
cacatgccacaggggcagatgacaggcccttcacctggcccatcccagtccccgtactca
cagtcctcagcagcaccccagtctgcccagtctccctatccacagcaacaggtgcctcag
tcccagccctcgcagcaggggagctcccaggctcctcctgcatcccaacccagttaccca
ccaggccaaggcccccaacaacaacagcagcagcagccgccgccaccatcacagcagcca
ccgcagacacccacacctgcttctcagccgcctgcgggacacggacagatgccgcaggga
cagcccacatcatactctcagaatcccccacaacaacaacagcagcagcagcagcagcaa
caatcgccatttcagcgttttcctcctcctcctcaggagatttcccaggagtcatttagc
tcccagtccagtgctcccccctccggtccgcctttggcatcgaagagcagcacagaggac
atacagggcagaccctctagtctaccagacctatctggttctattgatgacctacctact
ggtacggagggtgctctgagccctggagtcagcacatctggagtatccagcagtcaagga
gaacagagcaatccagcacagtcacccttctccccccacacctctcctccggtgggctcg
cctgccagcgcctcggcatctcgttctgggccactgtcccctgccacgatcccagggaac
cagatgcctcctcgcccttcaagtggacagtctgatggaatgatgcacccttcaatgaat
caacctggcctgggccaagagagaggatatatgcagagaaaccctcccatggcaccctat
gggtctccacagtctagctctgcgttgtctcctcgtcagtcgtctggaggccaggtgcat
gctggaatggtcccttatcagcagaacaactctatggcaaactatgggccacaaggtgct
caatatggcccacagggttaccccaggcagcctgggtacagtggcatgcctaatgccaat
tacccaggccctggcatgggtggatccatgaaccctatgtctggacaaggaggagggcca
atgtttgctggcatgccttctgcaaggatgccccatggacagatgggtgcacgtcccttt
ggccccaacatgggccccaacatgggtcccaacatgagtccgagtatgggtcctaatatg
gccaatatgccccctcaagtgggaactgggatgtgcccacctccaggactcaacagaaag
ccgcaggatgtcacatcaatgcagcacggacccgccaactcgatacacaacaggctacca
ggttaccccaatatgtctcctggtcctggtatgatgggctcaggacctccgtatggcccc
tccatgaacaacatgcctgggatgatgaatacccagggttctccctaccctatggctaat
aacactagtggtatgtccccaggtccagactttggtatggatggaaaacttaaccaagcc
cagaaaatgaataacaaagttgaggggacacccaagacagaatcaaaatccaagaagtca
agttcctccacaacaaccaatgagaagatcactcggttgtatgagctaggcccagagcca
gaaagaaagatgtgggtagaccgttacttggctttcatagaagaaaaagccatgggtatg
agtaacctaccagctgtgggacgcaaaccccttgatctcttccgcctctatgtgtctgta
aaggagattgggggtcttacacaggttaataagaacaaaaaatggagggagctgtccaca
aatctgaatgtggggacctccagcagtgctgccagctctctgaaaaagcagtacattcaa
tgtctgtatgcttttgaatgtaagattgagcgtggagaagacccaccacctgacattatg
tgtgtagatagtaaaaagaaccaggccaagattcagcctccctccccagctggatctggc
tctctccaggggccccaaacaccacagtccaccagcagctccatggcagaaagcggagac
ttgaagccccctactcctgcctccaccccacacagtcagatgaccccaataccaagtggc
aggagcagtgtgaacctgcaagatccatttgctgatagtgacttctctcggagaaacact
ttgacaccaaactctggctaccagtcaggcatgagcaccccagagatgcctggtcgcatg
ggtccctatgaacccaataaagaccactttggtggtatgcgtaaagttggagaacagttc
atgcctggtgggcagggtcccaacagcagtcttggtgatcagtacaacaggggagcacca
ggccctataggaaacttgcccatgggccagcggcaccagtatccatatggccccagctat
gacaggagaccagagtcagggataggcccagatggcagcatggggcctggagtgccacag
ccaaatatgatgacttccaatgctgaatctgggatgtattcaccaaatcgttaccctcct
cagcaacagcggcatgagtcctatagtaatcagtatcctggtcagggtgctcctcctggt
ggctcctatccgaatcagcagcctggaatgtacccacaacaacaatcgaactacaaaaga
ccagctgatggtggttacccaccagctaaacggcatcatgatggtgagatgttcagtggg
ccatacaatgctcagcagacacagccaccggcgcaggctccccctagtggtccctcaagt
ggtcaggaaatatacaaccagtataacagttcctaccctggctcggaccgtcgtccacct
ggccctcagaatcagttccctttcccctttggaagagatcggatgcaagcagccacaggc
ccaaactcccagggttccatgccacctcaaatgataggcagtccattgcagtctggtcct
gacggtcctcaaggtggcatgtggcagggccgaggtgatatgagctaccccagttacccc
aaccgccagggacctcctacaggtcccggtcagggccctggctaccatgcaatgaataga
tctgaagacatgatgccatctgaaccacgcatgaatcatgaaggccagtggcctgggcca
cgacaacccccatatggccctagtggcacaggtccaccaatgagcagacccttgcagtca
aattaccaatctccccaaaccatgcaaaaccacattccacaggtgtcaagccccacgccc
atgcctcgtcctatggaaagcaggacttcccccagcaaatcaacctacatacccagcaat
atcaaaatgcagaaggcgggacctccagtgcctgcatctcacattgtaccttcctcagta
cagcctccaatgatgagaagagacctgtccttccctccaggttccatagaggcaacgtca
ccagttctcaaatcacgtaggcgtcttaccatgaaagaaattggcactccagaagcatgg
agagtcatgatgtcccttaaatcaggactgttggcggagagtacatgggctttagacacc
atcaacatcttgttatatgatgacaacagtatttcaaattttaaccttatacagctccct
ggtttcctggaactaatcgttgagtatttccgccgttgcctcattgagatctttgggatt
ctgagggagtatgaagttggtgatccaggacaaagagctctgttagatcctagcgtgctc
aaaaatgaagaaaacactgtggatgatgaggcattggttgagggcatggaggaagatgga
gacacagaggaggaagatgaaggagaggaaattcacaggtcaaagcatcaggaactcata
gcacaaggacctctccagataaaacaggaagaaaagccaaggacacttgaagactctgtg
aagaaagaagattgccaagcgattgaaggagagtcatctgcagaacccaagacttcagag
ccaccatgtctcgagttagctgttactcaagagaagcccaaacaggctagcaagtttgat
aagctacctgtgaaaattgtgcgaaaaaaggatccatttgtggtggactgctcaaataag
cttggtcggttgcaggaatttgacagtggcctcctgcactggagtattggtggaggtgat
acaacagaacacattcaaacccactttgaaagcaagatggatctgttgcaccaacggaag
cgtcttcctgcacagatacctgacaggaagagaggagctcaggcacactcactaccctca
tccagtgaagagcgtgggaaagaagtggagctgcagccctctccagagtcatccactgag
aaagtgaccaatggaatttcagatttgagggacgaaagacctgctgactgcttagaaact
gcctctgaggggacatcacactttgagaaagatcaggagaaccaagtaacggagacaacg
acttcagaaaacatcaggccagcagctccaagcccatcattacagggtcagcgctccatt
gcaattttagaagatgagccacacagcaaggatgaagctcctctcgtcacgctctcagac
tggcaagattcccttgcccggcgctgcatctgtgtctccaacattgtccgcagcctctcg
ttcatcccgggcaatgactctgagatgtcaaagcatccagggctgttgctactgctgggc
cgcctgttgcttctccaccatcagcatccagagcgcaagcaggcaccattaacctacgag
aaagaagaggaggtggatgagagtcttggtagcaagaaagacgagtggtggtgggactgt
ttggaggttctgcgggaaaattgcttggtcactcttgccaacatctcaggccagcttgac
ttctctgtctacactgagagcatctgcctgcctctgctggatggcttgctccattgggcc
gtttgtccttcagcggaagcccaagaccctttccctagtctcgggcttaatggcgccttg
tccccccagaaactagtcctggagaccctctgtaagctcagcattcaggacaacaatgtg
gacctcattctggcgacgccaccttttaatagattagagaagctgtttggtaaccttgtg
cgtctagttggagagcgaaaggtgcctgtttgtcgggagatggcggtcgtgctgctggcc
aatcttgcacagggtgacagcctggtggcccgtgccattgcggtacagaaggccagtgta
gggaatctattgggcttcttggaggacagcttagcggctacacagttccagcagagccaa
ggttccctactgcacatgcaggggtcacactttgagccgacaagtgtggacatgatgcgg
cgggctgctcgggctctgctcgctcttgcgaaggtggaggagaaccactctgagtttacg
ctctatgaatcacggctactggacctttctgtctccccgctcatgaactcattggtgtcc
aatgtcatctgtgatgtactctttttgataggccagtcatga
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integrated database retrieval system
