Cyprinus carpio (common carp): 109050583
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Entry
109050583 CDS
T05134
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109050583 (usb1)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
109050583 (usb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
MitoNEET_N
Motif
Other DBs
NCBI-GeneID:
109050583
NCBI-ProteinID:
XP_018923696
Ensembl:
ENSCCRG00000004940
ENSCCRG00000039535
UniProt:
A0A8C1KMG5
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All DBs
Position
A25:7468192..7470405
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AA seq
283 aa
AA seq
DB search
MIVNYSSSSSEDETENTSKDDSSPLRKRGKLDTENSSISEPLDHGSVKRKAVKSAHSAPR
LPLPDSVKEMFRESEEQWIDKSEAHGGRLRSFQHERGNWATCVFCPYDPEEAFLELLNEM
MALAATHGIPLTLSEEFHLSLSKTVVLRHHWIQPFIQSIRTGLTQFQKFFCLADKLKVYS
NAEKTRTFLGMEISTGKTQLLELIKIVDETMTEFNLSTFYKDPSFHISLAWCVGDHVERL
KKTCLSEMQCLIDTHEDGPFYIQLNCTELRCKSGNKVFLFPLQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcaattacagtagtagcagttctgaagatgaaactgaaaacacttcaaaagat
gattcctcacctttaaggaaaagaggaaaacttgacactgaaaacagcagcatcagtgaa
cctttggatcatggatctgttaaaaggaaagctgtcaaatcagcccactcggcacctcgg
cttcctcttcctgatagcgtgaaggagatgttcagagaatcagaagaacagtggattgat
aaaagtgaagcgcatggagggcgactgcggtccttccagcatgagcggggcaactgggct
acatgcgtgttctgtccttatgatcctgaggaggcctttctggagctgctcaatgaaatg
atggcgcttgcggccactcacggcatccccctgaccctctctgaagaatttcacctcagt
ctctcaaagacagtggttctgcgccatcattggatccaaccatttattcagtccattcgg
actggtctgacacagttccagaagtttttctgcttggccgataaactgaaggtttattct
aatgctgaaaagactaggaccttccttggtatggaaatctccactggaaaaactcagttg
cttgagctcatcaaaatagtggatgaaaccatgacagaattcaaccttagcaccttttat
aaggatccttctttccacataagccttgcttggtgtgtgggtgatcatgtggaaagattg
aaaaagacatgtttatcagaaatgcagtgtctcattgacactcatgaagacgggcctttt
tacatacagctcaactgcacggagcttcgctgcaaatcgggaaataaagtctttcttttc
cccctccagtga
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