Cyprinus carpio (common carp): 109050689
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Entry
109050689 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04136
Autophagy - other
ccar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109050689
04136 Autophagy - other
109050689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109050689
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109050689
Membrane trafficking [BR:
ccar04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109050689
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109050689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_TEP1_2nd
VID27
Motif
Other DBs
NCBI-GeneID:
109050689
NCBI-ProteinID:
XP_042577177
Ensembl:
ENSCCRG00000007681
UniProt:
A0A9Q9ZX22
LinkDB
All DBs
Position
A3:17687876..17695327
Genome browser
AA seq
425 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCTLSISNDNCYLAYPGSATIGEXQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSXAFSM
EGLYLSASSNTETVHIFKLETQREKPQEEPTTWTGYFGKVLMASTTYLPAHVTEMFTQGR
AFATVRLPFSGHKNICALAIIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLDGS
AEAANEILEQTAHDRPLVAQTYSAAVAKGYTEDQGAVGGAGLEDDMNTLHLDEENEQPPL
ILETD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aatcaggataacacatccctagctgttggtaccaagtccgggtacaagtttttctccttg
tcatcagtggacaaattggaacaaatttacgaatgtactgacacagaagatgtgtgcatc
gtggagagattgttctccagcagccttgtcgctattgtcagccttaaggcacctaggaag
ctgaaagtctgtcatttcaagaaagggactgagatatgcaactacagctactcaaacact
atactggctgtaaagctaaacagacagagactgatagtgtgtttagaggagtcactctat
atccacaacattagggatatgaaagtactacataccattcgagagacccctccgaatcct
tccggactatgtaccctgtcaatcagtaatgacaactgttacttggcctatccgggaagt
gcaacaattggagagnnacaagtttttgacactgtcaatctgagggcagctaacatgata
cctgcccatgatagtccactagcagcactggcgtttgatgcaagcggcactaaattggcc
acggcatctgagaagggcactgtaatccgagtgttctccattccagagggccaaaagctc
tttgagttccggaggggagttaagagatgtgtgagcatctgttccnctgccttcagtatg
gagggactctatctgtctgcctcgagcaacacggagacagttcatatttttaagctggag
acccagagagagaagcctcaagaggagcctactacttggacgggatactttgggaaagta
ttgatggcctccacaacgtatctgcctgcacacgtaacagagatgttcactcaaggaagg
gcatttgccacagtcagactgcccttttcaggtcacaagaacatctgcgctctggccata
atccagaagatcccacgcctgctggtggctgcagcagatggctatctttacctgtacaac
ttggacccacaggaggggggagagtgcacactaatgaaacagcataagttagatggaagt
gcagaggcagcgaatgaaattcttgaacaaaccgctcacgaccggccacttgtggcacag
acctacagtgctgctgttgccaaaggttacactgaggatcagggggcggtggggggtgct
ggactggaggatgacatgaacaccctgcacctggacgaagagaacgagcagcctccgtta
atcctggaaacagactga
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integrated database retrieval system
