Cyprinus carpio (common carp): 109050732
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Entry
109050732 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
ccar04137
Mitophagy - animal
ccar04144
Endocytosis
ccar04340
Hedgehog signaling pathway
ccar04350
TGF-beta signaling pathway
ccar04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109050732
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109050732
04350 TGF-beta signaling pathway
109050732
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109050732
04137 Mitophagy - animal
109050732
09144 Cellular community - eukaryotes
04520 Adherens junction
109050732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109050732
04121 Ubiquitin system [BR:
ccar04121
]
109050732
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109050732
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109050732
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109050732
Autophagy
Mitophagy
Other mitophagy associated proteins
109050732
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
HECT type E3
109050732
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109050732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
109050732
NCBI-ProteinID:
XP_018923861
Ensembl:
ENSCCRG00000007960
UniProt:
A0A9Q9ZBK6
LinkDB
All DBs
Position
B3:19895081..19937191
Genome browser
AA seq
728 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
XWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQEQRLHAQRIRNQDSRGHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQHSQVKESSQALPVQMEVGMEEGDGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLAKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGKNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVE
ETCGFAVE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcgaaggaacgggtcaagcatcaaaatccgactgacagtatta
tgtgccaagaatctggcaaagaaagacttctttcggttgcctgatcctttcgccaaagtg
gtggtggatggctcgggtcaatgccactctacagacacggtcaaaagcacattggaccca
nagtggaatcagcattacgacctgtatattgggaagacagattccatcaccattagcgta
tggaaccacaagaagatccataagaagcagggtgcgggtttcttaggctgtgtgcgtctc
ctgtccaatgccatcagcagactaaaagacacaggctaccagcgtttagacttatgcaag
ctgaacccatctgacagtgatgctgtccgtggacaaatcgttgtgagtttgcagaccaga
gacagaattggcagtggagggcctgtggtcgactgtagaggactggtagagaatgaaggg
cctgtctttgaagactcggggcccgggcggcctctcagctgcttcatggaggagcccatg
ccatacacagatcctacaggagccgctggcgggggcaactgccgtgcacttgagtcgccc
aatcaggagcaacggctccatgcacaacgcatcagaaaccaagattcccgagggcatgca
cacaccccccaaaacagaccacacggacaccaatcccctgacctccctgagggctatgag
caaaggaccaccgtgcagggccaagtctattttctgcacacacagactggcgtgagcacc
tggcatgatcccagaataccccgggatttgaacagcgtgagttgtgaggagctgggccct
ctgccgcccggctgggagatcaggagcactgtgtcaggacgaatttattttgtcgaccac
aataatagaaccacgcaattcaccgaccccaggttacaccacatcatgagccaacactct
caggtgaaggagtcgagccaggctctgcccgtacagatggaagttggcatggaggaaggt
gatggcgaattaccggtgcgctatgagagagatctggtccagaaactcaaagttctccgc
catgagctctccctgcagcagcctcaagccggccactgccgcatagaagtgtcccgtgag
gagatctttgaggagtcttatagacagatcatgaagatgagacctaaagacctgaagaag
cggctgatggtgaagttcagaggagaggaggggcttgattacggtggagttgctagggaa
tggttgtatctcctctgccatgagatgctgaatccatactacggcctgtttcagtactcc
actgataacatctacacactacagatcaacccagactcatccatcaaccctgaccacttg
tcttacttccactttgttgggcggattatgggtctggctgttttccacgggcactacatc
aacggaggcttcaccttacccttctacaagcagctcctggcgaagcccatccagctttgt
gaccttgagactgtggacccagagctgcacaagagcctcgtctggatactagagaatgac
atcacatctgtcttggaccacaccttctgcgtagaacataatgcttttggcaaattcctc
caacacgagctgaaaccaaacggcaagaacatcccggtcacagaggagaacaagaaagaa
tatgtgaggctgtatgtcaactggagattcatgcgtggcattgaggcccaattcctcgcc
ctgcagaagggcttcaacgaactcataccacagcatctgctcaagccttttgacaacaag
gaacttgagctgatcatcggaggtttgggcaagatcgatctgaacgactggaaggccaac
acacggctgaagcactgtgtggctgacagtaacatagtgaagtggttctggcaggcggtt
gaatcgtttgacgaggagaggagaggcagattgctacagttcgtcacaggctccacacgc
gtccctctacaaggcttcaaagcactgcaaggttctgcaggaccaagactcttcactatt
catttaattgatgccaacacggacaacctgcccaaagcccatacatgcttcaaccggatc
gacatcccgccttacgagtcatacgagaagctctatgagaagctcctgacggctgtggaa
gagacatgtggctttgcagtggagtga
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