Cyprinus carpio (common carp): 109050840
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Entry
109050840 CDS
T05134
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109050840 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109050840 (myo5c)
04131 Membrane trafficking [BR:
ccar04131
]
109050840 (myo5c)
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109050840 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109050840 (myo5c)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
109050840 (myo5c)
mRNA cycle factors
P-body specific factors
109050840 (myo5c)
Membrane trafficking [BR:
ccar04131
]
Others
Actin-binding proteins
Myosins
109050840 (myo5c)
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109050840 (myo5c)
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109050840 (myo5c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
CCDC89
AAA_22
Csm1_N
nSTAND3
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
109050840
NCBI-ProteinID:
XP_042570989
Ensembl:
ENSCCRG00000006332
LinkDB
All DBs
Position
A25
Genome browser
AA seq
1745 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWQSAEILTDFKPGETVLELQLEDGTELQYPLEGGEKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKTLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARFAMRYFA
VVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACANQPEFKGLRLLAAEKFNYTRLGGETEIEGVDD
RADMAETRRTFSLLGLKDSFQADVFKVLAAILHLGNVVIKENGSEKSSIGSRDPHLAIFC
ELMGVNMDNMSRWLCHRRIVLSSETVVKPQPKERAINARDALAKHIYAHLFDWVIHKINQ
ALMIPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEARMGILDLLDEECLFLQGTDKNWLQKLYNFLGSKPLFEKPR
MSNDSFVIQHFADKVEYQCKGFLEKNRDTLYEELVEIMRTSQNALLADFFKEEEPNSSHK
NIKVTPAHPRVKASNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFEYD
SKRVVQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMSQTELKLGEKKQTCKTVLQ
RLIPDSNQYKFGRSKIFFRAGQVAYLEKLRLDHLRAACVTIQKHVRGWRQRHRFLHMRQA
AITIQQYVRGKKQIRRCITALALKQAWAAVIIQRHCRGYLVRRIYHLVLRAAVIIQAYTR
GWTARKRYRKMVAEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSYRVQQLRKKIEEQN
KENLGLMEKLTSLSNARAQGLEKIQALEAELGKLTNEMAALEASARTKSEEADQTIALLQ
SDREKLTEANKALEQTLKETTLQMQDQFEDVKRKLMEDLEREERFRKVAEHNSELQKEDS
DKEIVVLKEESRRLREERIRLQTQVEEDQKINAELQEQVLQLTKHVKVIPDLRKEINSLQ
MQRAEADKTVRAQNLQARAKMSLITRQLLGEAKEEILIQRLNEEALDKGDGADLLAAFDA
MEKAAKVMETQQREQKDTYKSQLEALVFKNEHLNKENEQLQALFQEKSNVNQSIGQEVAR
LSAENMVIPELKQQVSELNRHKQELETQLQEQSSEMSAKIKELSNELQLAVEEQQSQRRH
LEEEITESERRREEMERQVADLQEENQQLQKAQLSESEAKNKLRQDTSRLTAENMDFEEQ
LDMKDRLIKRLQDQIKALQTHATANQKAAPAVPKEYLGMLEYKKEDEGRLIRTLILELKP
RGVGVLMIPGLAAHLLFMCVRHGDYLNDGNKLKSLMNGIISAIKEVITNHQESFEVLSFW
LSNTYHFLNCLKQYSGDEEFMKHNTPRQNKNCLRNFDLSEHRQILSDLAINIYHQFISVM
EDALFPMIIPGMLEHESLQGISSMKPTGFRKRSNSVYEDGGDHGGSEPFSVTDILQKLDA
FHTSMVQHGMEPQLQGQVIRQLFFLIGATSVNSILLRKDLCSCRKGMQIRCNISYLEEWL
REKDLQSSCAMETLGSLSQVAWLLQVSKTTDEDAAEIKQRCSELSPVQIVKILNSYTPID
DFEKRVTPSFVRKVQALLQEREGSSQLMMDSQYRFQVTFPFCSSAQALELLQVPSNLRLG
FVTRI
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcggagttgtatacaaagtataacagggtgtggatccctgatgcggaacat
gtttggcaatctgcggagattctgacagatttcaagcctggtgagactgtgctggaacta
cagctggaggatggcacggagttgcagtatcctctggaagggggtgagaagttgccaccc
ctccgtaacccggacatcctggtgggtgagaacgacctcacggccctcagttaccttcat
gagccggccgtgcttcacaacctcaaagtccgatttgtcgagtccaaaatcatctacaca
tattgcggaattatcctggtggcagtcaatccatacaaaacgcttccgatctatggagat
gcggtcatccatgcttactctggtcaaaacatgggcgacctggaccctcatatatttgct
gtggctgaagaggcctacaaacaaatggccaggaataacaagaatcagtccatcattgtg
agcggtgagtccggggctggaaagactgtatctgctcgctttgctatgaggtacttcgct
gtggttagcaaatctggcagcaaaacgcgggtggaagacaaagttttggcatccaacccg
atcactgaggccattggaaatgcaaaaacaaccagaaatgacaacagcagtcgatttggg
aagtacactgagatcagcttcgacaaaagataccaaatcattggtgccaacatgaggaca
taccttctggaaaagtcaagggtggtttttcagtcagagaatgagagaaattatcacatc
ttctaccaaatgtgtgcatgtgcaaaccagccggagtttaaaggcttaagactgttggcc
gcagagaagtttaattacacacgtttgggtggtgagacagagatcgaaggtgtggacgac
cgcgctgacatggcagaaacacgcagaactttcagtctacttggtcttaaggacagtttt
caggctgacgtgtttaaggtgctcgctgcgattctgcatttgggaaacgtggttatcaag
gagaacggctctgagaaatcgtccatcggttccagagaccctcacttggccatattctgt
gagctgatgggcgtcaacatggacaacatgagccgctggctgtgtcacagacggatagtc
ctgtcatcagagacagtggtgaaaccgcagcccaaggaacgtgccatcaacgcccgtgat
gcccttgccaaacacatctacgcccatcttttcgactgggtcatccacaagatcaaccag
gcactaatgatccctgggaaacaacattcatttattggggtgttggatatttatggattt
gagacctttgacgtgaacagtttcgagcagttctgcatcaactacgccaacgagaagctg
cagcagcagttcaacctgcacgtgtttaaactggagcaggaggagtacatgaaagaggat
attccctggacgctgatcgatttctatgacaatcagcctgttattgatctcatcgaggct
aggatgggcattctggaccttttagatgaggagtgtctgttcctgcagggcactgataaa
aactggctgcaaaagctgtacaattttctaggctcaaagccgctgtttgagaaaccccgg
atgtctaatgactctttcgtgatccagcattttgctgataaggtagaatatcagtgtaaa
ggttttttggagaagaacagagacacactgtatgaagagctggtggaaatcatgcgcact
agtcagaatgctctcttggcagatttttttaaagaggaggaaccaaattctagccataaa
aatatcaaggtgacaccggcacatcccagagtcaaagcttcaaacaagcagctgagaacc
actgtaggagacaagtttcgaagttccttgtacctgttaatggaaacgctgaatgctaca
acacctcattatgtgcgctgcattaaacccaatgaggagaaactgccgtttgagtacgac
tcaaagcgtgtggtgcagcagctgagggcctgtggtgtgctggagaccatccgtatcagt
gcccagagttacccgtccagatggacgtacatagagtttttcagccgttacagtatattg
atgagccagacggagctgaagctgggagagaagaagcagacgtgcaagacggttctgcag
agactcattcctgattccaaccagtacaagttcggtcggagtaagatcttcttccgggcg
ggacaggtggcgtacctggagaagctgcgtttggatcatcttcgtgcggcgtgcgtgacc
atccagaagcacgtgaggggctggaggcagagacacaggttcctgcacatgagacaagct
gccatcactatccaacagtacgtgcgcggaaagaaacagatcagacgctgtataacagct
ctggcgctgaagcaggcctgggccgctgtgatcatccagagacactgtcgtgggtatctg
gtccggaggatttaccatctcgtcctgagggctgcagtcatcatacaggcctacaccaga
ggatggacggcccgcaagcgctaccgaaagatggtggcagaacacaaggctctggttctg
cagaaatacgctcgagcttggctggtgcgccggcgctttcaaaccatgcggcggctggtc
atcaacgtgcagctctcgtaccgagtccagcagctgcgcaagaaaatagaagagcagaat
aaagagaacctaggccttatggaaaaactcaccagtttgtctaatgcacgtgctcaagga
ctagaaaagatccaggctctggaggcggagcttggaaagctaaccaatgagatggcagct
ttagaagcgagcgcgagaacgaagtctgaagaggccgatcagacaatcgctctgcttcag
agtgacagagagaaactcaccgaggcgaataaggctttggagcagacactgaaagagacg
accctgcagatgcaagatcaatttgaggatgtaaagagaaaactgatggaggatttagaa
agagaggagagattcagaaaggtggcggagcacaacagtgaactccagaaggaagactcg
gataaagagatcgtcgtactgaaagaggaaagccgtagactgagagaggagcgcatcagg
ctccagacgcaagtggaggaggaccagaagatcaatgcagaactgcaggaacaagtgctg
cagctcaccaaacacgtgaaggtcataccagatttacggaaagaaatcaacagcctgcag
atgcagcgagctgaagctgataaaaccgtgagagctcagaatctacaagccagagctaag
atgagtttgatcaccagacagctgctcggtgaagctaaagaggaaattctcatccagaga
cttaatgaagaagccttagataaaggtgatggagctgatcttctcgctgcttttgacgcc
atggagaaagctgctaaggtgatggaaactcagcagcgggagcaaaaggacacttataag
agtcagctggaagctctggtcttcaaaaacgaacatttaaacaaagagaacgagcagctt
caagctctctttcaggagaagagcaacgtcaaccaaagcatcggacaggaagtggcccgt
ctctctgctgagaacatggtgattccagaactgaagcagcaggtgtcagaattgaaccgc
cacaaacaagagcttgagacacagttacaagagcagagctctgagatgagcgcaaaaata
aaggagttatcaaacgagcttcagctcgctgttgaagagcagcaatcacagcgcaggcac
ctagaggaggagattacagagagcgagaggagaagagaagagatggagagacaggtggct
gacctccaggaggagaaccagcagctgcagaaagcccagctctcagagagcgaagccaag
aacaaactcagacaggacacatcacgcctcacagctgagaatatggactttgaggagcag
ctggacatgaaggacagactgataaaacgactccaagaccaaatcaaagctcttcaaaca
catgcgacagccaatcagaaagcagcaccggctgtgcccaaagagtacttgggcatgttg
gagtacaagaaggaggacgaaggcaggctgatccggacgcttatactggagctgaaacct
cgcggtgtgggagtgctaatgatccctggtctggctgcacatctcctcttcatgtgtgtg
agacacggcgattacctcaacgatggaaacaaactcaagtccctcatgaacggcatcatc
tcagccatcaaagaggtcatcacgaaccaccaggagagttttgaagttctgtccttctgg
ctctcaaacacatatcacttcctcaactgtctcaaacagtacagcggagacgaggagttc
atgaagcacaacactcctcgtcagaacaagaactgcttgaggaacttcgacctgtcagag
caccggcagattctcagcgacctcgccatcaacatctaccatcagttcatcagcgtgatg
gaggacgcgctctttcccatgatcatccctgggatgttggagcacgagagtcttcaggga
atctccagcatgaagcccaccggtttccgcaagcgctcgaacagcgtgtatgaggacggc
ggggaccacggcgggtcggagccgttcagcgtcacagacatcctgcagaagctcgacgcg
ttccacaccagcatggtgcagcatggcatggagccgcagctgcagggtcaggtcataaga
cagctgttcttcctcatcggagccacatcggtgaacagcattctgctccgcaaggacctg
tgctcctgccgcaagggcatgcagatcaggtgtaacatcagttatctagaggagtggctg
cgagagaaggatctgcagagcagctgcgccatggaaacgctggggtcgctctctcaggtc
gcctggcttcttcaagtcagcaagaccacagatgaagacgcagccgagatcaagcagaga
tgctctgagctctctcctgtgcagattgtgaaaatccttaactcctacacacccattgat
gatttcgaaaagcgcgtcactccgtcgtttgtccgcaaagtgcaggcgttgctgcaggag
cgcgaggggtcgtctcagctgatgatggattcacagtatcgcttccaggtcacctttccc
ttctgctcctcagcacaagcactagaactcctacaggtgcccagcaacctccgtctgggc
ttcgtcactcgcatttga
DBGET
integrated database retrieval system
