Cyprinus carpio (common carp): 109050840
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Entry
109050840 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc-like
KO
K10357
myosin V
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109050840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109050840
04131 Membrane trafficking [BR:
ccar04131
]
109050840
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109050840
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109050840
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
109050840
mRNA cycle factors
P-body specific factors
109050840
Membrane trafficking [BR:
ccar04131
]
Others
Actin-binding proteins
Myosins
109050840
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109050840
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109050840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
AAA_22
Myosin_N
Csm1_N
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
109050840
NCBI-ProteinID:
XP_018923945
LinkDB
All DBs
Position
49:complement(482236..503781)
Genome browser
AA seq
1619 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWQSAEILTDFKPGETVLELQLEDGTELQYPLEGGEKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKTLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARFAMRYFA
VVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYLKDSFQADVFKVLAAILHLGNVVIKENGSEKSSIGSRD
PHLAIFCELMGVNMDNMSRWLCHRRIVLSSETVVKPQPKERAINARDALAKHIYAHLFDW
VIHKINQALMIPGKQHSFIGVLDIYGYFLQGTDKNWLQKLYNFLGSKPLFEKPRMSNDSF
VIQHFADKVEYQCKGFLEKNRDTLYEELVEIMRTSQNALLADFFKEEEPNSSHKNIKVTP
AHPRVKASNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFEYDSKRVVQ
QLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMSQTELKLGEKKQTCKTVLQRLIPDS
NQYKFGRSKIFFRAGQVAYLEKLRLDHLRAACVTIQKHVRGWRQRHRFLHMRQAAITIQQ
YVRGKKQIRRCITALALKQAWAAVIIQRHCRGYLVRRIYHLVLRAAVIIQAYTRGWTARK
RYRKMVAEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSYRVQQLRKKIEEQNKENLGL
MEKLTSLSNARAQGLEKIQALEAELGKLTNEMAALEASARTKSEEADQTIALLQSDREKL
TEANKALEQTLKETTLQMQDQFEDVKRKLMEDLEREERFRKVAEHNSELQKEDSDKEIVV
LKEESRRLREERIRLQTQVEEDQKINAELQEQVLQLTKHVKVIPDLRKEINSLQMQRAEA
DKTVRAQNLQARAKMSLITRQLLGEAKEEILIQRLNEEALDKGDGADLLAAFDAMEKAAK
VMETQQREQKDTYKSQLEALVFKNEHLNKENEQLQALFQEKSNVNQSIGQEVARLSAENM
VIPELKQQVSELNRHKQELETQLQEQSSEMSAKIKELSNELQLAVEEQQSQRRHLEEEIT
ESERRREEMERQVADLQEENQQLQKAQLSESEAKTNYRQDTSRLTAENMDFEEQLDMKDR
LIKRLQDQIKALQTHATANQKAAPAVPKEYLGMLEYKKEDEGRLIRTLILELKPRGVGVL
MIPGLAAHLLFMCVRHGDYLNDGNKLKSLMNGIISAIKEVITNHQESFEVLSFWLSNTYH
FLNCLKQYSGDEEFMKHNTPRQNKNCLRNFDLSEHRQILSDLAINIYHQFISVMEDALFP
MIIPGMLEHESLQGISSMKPTGFRKRSNSVYEDGGDHGGSEPFSVTDILQKLDAFHTSMV
QHGMEPQLQGQVIRQLFFLIGATSVNSILLRKDLCSCRKGMQIRCNISYLEEWLREKDLQ
SSCAMETLGSLSQVAWLLQVSKTTDEDAAEIKQRCSELSPVQIVKILNSYTPIDDFEKRV
TPSFVRKVQALLQEREGSSQLMMDSQYRFQVTFPFCSSAQALELLQVPSNLRLGFVTRI
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcggagttgtatacaaagtataacagggtgtggatccctgatgcggaacat
gtttggcaatctgcggagattctgacagatttcaagcctggtgagactgtgctggaacta
cagctggaggatggcacggagttgcagtatcctctggaagggggtgagaagttgccaccc
ctccgtaacccggacatcctggtgggtgagaacgacctcacggccctcagttaccttcat
gagccggccgtgcttcacaacctcaaagtccgatttgtcgagtccaaaatcatctacaca
tattgcggaattatcctggtggcagtcaatccatacaaaacgcttccgatctatggagat
gcggtcatccatgcttactctggtcaaaacatgggcgacctggaccctcatatatttgct
gtggctgaagaggcctacaaacaaatggccaggaataacaagaatcagtccatcattgtg
agcggtgagtccggggctggaaagactgtatctgctcgctttgctatgaggtacttcgct
gtggttagcaaatctggcagcaaaacgcgggtggaagacaaagttttggcatccaacccg
atcactgaggccattggaaatgcaaaaacaaccagaaatgacaacagcagtcgatttggg
aagtacactgagatcagcttcgacaaaagataccaaatcattggtgccaacatgaggaca
taccttctggaaaagtcaagggtggtttttcagtcagagaatgagagaaattatcacatc
ttctatcttaaggacagttttcaggctgacgtgtttaaggtgctcgctgcgattctgcat
ttgggaaacgtggttatcaaggagaacggctctgagaaatcgtccatcggttccagagac
cctcacttggccatattctgtgagctgatgggcgtcaacatggacaacatgagccgctgg
ctgtgtcacagacggatagtcctgtcatcagagacagtggtgaaaccgcagcccaaggaa
cgtgccatcaacgcccgtgatgcccttgccaaacacatctacgcccatcttttcgactgg
gtcatccacaagatcaaccaggcactaatgatccctgggaaacaacattcatttattggg
gtgttggatatttatgggtatttcctgcagggcactgataaaaactggctgcaaaagctg
tacaattttctaggctcaaagccgctgtttgagaaaccccggatgtctaatgactctttc
gtgatccagcattttgctgataaggtagaatatcagtgtaaaggttttttggagaagaac
agagacacactgtatgaagagctggtggaaatcatgcgcactagtcagaatgctctcttg
gcagatttttttaaagaggaggaaccaaattctagccataaaaatatcaaggtgacaccg
gcacatcccagagtcaaagcttcaaacaagcagctgagaaccactgtaggagacaagttt
cgaagttccttgtacctgttaatggaaacgctgaatgctacaacacctcattatgtgcgc
tgcattaaacccaatgaggagaaactgccgtttgagtacgactcaaagcgtgtggtgcag
cagctgagggcctgtggtgtgctggagaccatccgtatcagtgcccagagttacccgtcc
agatggacgtacatagagtttttcagccgttacagtatattgatgagccagacggagctg
aagctgggagagaagaagcagacgtgcaagacggttctgcagagactcattcctgattcc
aaccagtacaagttcggtcggagtaagatcttcttccgggcgggacaggtggcgtacctg
gagaagctgcgtttggatcatcttcgtgcggcgtgcgtgaccatccagaagcacgtgagg
ggctggaggcagagacacaggttcctgcacatgagacaagctgccatcactatccaacag
tacgtgcgcggaaagaaacagatcagacgctgtataacagctctggcgctgaagcaggcc
tgggccgctgtgatcatccagagacactgtcgtgggtatctggtccggaggatttaccat
ctcgtcctgagggctgcagtcatcatacaggcctacaccagaggatggacggcccgcaag
cgctaccgaaagatggtggcagaacacaaggctctggttctgcagaaatacgctcgagct
tggctggtgcgccggcgctttcaaaccatgcggcggctggtcatcaacgtgcagctctcg
taccgagtccagcagctgcgcaagaaaatagaagagcagaataaagagaacctaggcctt
atggaaaaactcaccagtttgtctaatgcacgtgctcaaggactagaaaagatccaggct
ctggaggcggagcttggaaagctaaccaatgagatggcagctttagaagcgagcgcgaga
acgaagtctgaagaggccgatcagacaatcgctctgcttcagagtgacagagagaaactc
accgaggcgaataaggctttggagcagacactgaaagagacgaccctgcagatgcaagat
caatttgaggatgtaaagagaaaactgatggaggatttagaaagagaggagagattcaga
aaggtggcggagcacaacagtgaactccagaaggaagactcggataaagagatcgtcgta
ctgaaagaggaaagccgtagactgagagaggagcgcatcaggctccagacgcaagtggag
gaggaccagaagatcaatgcagaactgcaggaacaagtgctgcagctcaccaaacacgtg
aaggtcataccagatttacggaaagaaatcaacagcctgcagatgcagcgagctgaagct
gataaaaccgtgagagctcagaatctacaagccagagctaagatgagtttgatcaccaga
cagctgctcggtgaagctaaagaggaaattctcatccagagacttaatgaagaagcctta
gataaaggtgatggagctgatcttctcgctgcttttgacgccatggagaaagctgctaag
gtgatggaaactcagcagcgggagcaaaaggacacttataagagtcagctggaagctctg
gtcttcaaaaacgaacatttaaacaaagagaacgagcagcttcaagctctctttcaggag
aagagcaacgtcaaccaaagcatcggacaggaagtggcccgtctctctgctgagaacatg
gtgattccagaactgaagcagcaggtgtcagaattgaaccgccacaaacaagagcttgag
acacagttacaagagcagagctctgagatgagcgcaaaaataaaggagttatcaaacgag
cttcagctcgctgttgaagagcagcaatcacagcgcaggcacctagaggaggagattaca
gagagcgagaggagaagagaagagatggagagacaggtggctgacctccaggaggagaac
cagcagctgcagaaagcccagctctcagagagcgaagccaagacaaactacagacaggac
acatcacgcctcacagctgagaatatggactttgaggagcagctggacatgaaggacaga
ctgataaaacgactccaagaccaaatcaaagctcttcaaacacatgcgacagccaatcag
aaagcagcaccggctgtgcccaaagagtacttgggcatgttggagtacaagaaggaggac
gaaggcaggctgatccggacgcttatactggagctgaaacctcgcggtgtgggagtgcta
atgatccctggtctggctgcacatctcctcttcatgtgtgtgagacacggcgattacctc
aacgatggaaacaaactcaagtccctcatgaacggcatcatctcagccatcaaagaggtc
atcacgaaccaccaggagagttttgaagttctgtccttctggctctcaaacacatatcac
ttcctcaactgtctcaaacagtacagcggagacgaggagttcatgaagcacaacactcct
cgtcagaacaagaactgcttgaggaacttcgacctgtcagagcaccggcagattctcagc
gacctcgccatcaacatctaccatcagttcatcagcgtgatggaggacgcgctctttccc
atgatcatccctgggatgttggagcacgagagtcttcagggaatctccagcatgaagccc
accggtttccgcaagcgctcgaacagcgtgtatgaggacggcggggaccacggcgggtcg
gagccgttcagcgtcacagacatcctgcagaagctcgacgcgttccacaccagcatggtg
cagcatggcatggagccgcagctgcagggtcaggtcataagacagctgttcttcctcatc
ggagccacatcggtgaacagcattctgctccgcaaggacctgtgctcctgccgcaagggc
atgcagatcaggtgtaacatcagttatctagaggagtggctgcgagagaaggatctgcag
agcagctgcgccatggaaacgctggggtcgctctctcaggtcgcctggcttcttcaagtc
agcaagaccacagatgaagacgcagccgagatcaagcagagatgctctgagctctctcct
gtgcagattgtgaaaatccttaactcctacacacccattgatgatttcgaaaagcgcgtc
actccgtcgtttgtccgcaaagtgcaggcgttgctgcaggagcgcgaggggtcgtctcag
ctgatgatggattcacagtatcgcttccaggtcacctttcccttctgctcctcagcacaa
gcactagaactcctacaggtgcccagcaacctccgtctgggcttcgtcactcgcatttga
DBGET
integrated database retrieval system
