Cyprinus carpio (common carp): 109050878
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Entry
109050878 CDS
T05134
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03020
RNA polymerase
ccar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109050878
09124 Replication and repair
03420 Nucleotide excision repair
109050878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109050878
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109050878
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109050878
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109050878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
109050878
NCBI-ProteinID:
XP_042571184
UniProt:
A0A8C1L3P7
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All DBs
Position
A25:complement(7734760..7740110)
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AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPTIAIDWVQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPIPQEWPKSEYSEIEENKYEATYDPNGKPERFYYTVESCGSLR
PETIVMSAFAILKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgccaaccagcccacagtgaaaatcacggagctgacggacgagaatgtgaag
tttgtgatcgagaacacggatctcgcggtggcaaactcaattcgacgtgttttcatgtca
gaagttccaaccatcgctatcgattgggttcagattgatgccaactcctctgtgcttcat
gatgaatttattgcacacagagtggggttaattccactcacaagtgatgacattgttgac
aagatgcagtactcacgagactgcacatgtgatgatttctgcccggagtgttcggttgag
ctcacgctggatgtgagatgtacagaagaccagacgcgacacgtgacctcacgagatctc
ctgtccaataacccccgagtcatccctgtaacatccagaagtcgagacaatgatcccaat
gactatgtagagcaggatgacatcctgttggtgaagctcaggaagggtcaggagctgcgt
ctcagagcatacgctaaaaagggttttggcaaggagcatgccaaatggaatcccactgca
ggagtggcgttcgagtacgacccagacaatgcactgagacacacagtgtacccaattcca
caggaatggcctaaaagtgagtattcagaaattgaggagaacaaatatgaagctacatat
gatcctaatggcaagccagaaaggttctattacaccgtggagtcctgcggttcacttcgg
ccggagaccattgtaatgtcggcttttgccatacttaagaagaaactgagcgatctgcag
acgcagctcagccatgaaattcaaagtgatgtgctcaccattaactaa
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integrated database retrieval system
