Cyprinus carpio (common carp): 109050906
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Entry
109050906 CDS
T05134
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
ccar04137
Mitophagy - animal
ccar04144
Endocytosis
ccar04340
Hedgehog signaling pathway
ccar04350
TGF-beta signaling pathway
ccar04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109050906
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109050906
04350 TGF-beta signaling pathway
109050906
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109050906
04137 Mitophagy - animal
109050906
09144 Cellular community - eukaryotes
04520 Adherens junction
109050906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109050906
04121 Ubiquitin system [BR:
ccar04121
]
109050906
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109050906
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109050906
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109050906
Autophagy
Mitophagy
Other mitophagy associated proteins
109050906
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
HECT type E3
109050906
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109050906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
109050906
NCBI-ProteinID:
XP_042577211
Ensembl:
ENSCCRG00000001383
ENSCCRG00000033050
UniProt:
A0A9Q9W6E5
LinkDB
All DBs
Position
A3:17744073..17774353
Genome browser
AA seq
775 aa
AA seq
DB search
MHSPHISVARFYTFFYPLEASVVGLSWRKLVGYFVGVMSNPGTRRNGSSIKIRLTVLCAK
NLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDPKWNQHYDLYIGKTDSITISVWNH
KKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDSDAVRGQIVVSLQTRDRI
GSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPMPYTDPTGAAGGGNCRALESPNQE
QRLQAQRIRNQDSRGHTHTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHD
PRIPRCTNISLRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDHNNRTTQFTDPRLHHIM
SQHSQGKESSQPLPVQMEVGMEEGDGELPVRYERDLVQKLKVLRHELSLQQPQAGHCRIE
VSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGL
FQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTLPFYKQLLGKP
IQLCDLETVDPELHKSLVWILENDIASVLDHTFCVEHNAFGKFLQHELKPNGKNIPVTEE
NKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNKELELIIGGLGKIDLND
WKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTRVPLQGFKALQGSTGSA
GPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcccacatattagcgtagcgcgtttttatacgtttttctatccgcttgaagcg
agcgtcgtgggtttatcctggagaaagttggttggttattttgtgggagtgatgtcgaat
cctgggactcgaaggaacgggtcaagcatcaaaatccgactgacagtattatgtgccaag
aatctggcaaagaaagacttcttccgtttgcctgatcctttcgccaaagtggtggtggat
ggctcgggtcagtgccactctacagacacggtcaaaagcacattggaccccaagtggaat
cagcattacgacctgtatattgggaagacagattccatcaccattagtgtatggaaccat
aagaagatccataagaagcagggtgcgggtttcttaggctgtgtgcgactcctgtccaac
gccatcagcagactaaaagacacaggctaccagcgtttagacttatgcaagttgaaccca
tctgacagtgatgctgtccgtggacaaatcgttgtgagtctgcagaccagagacagaatt
ggcagtggagggcctgtggtcgactgtagaggactggtagagaatgaagggccagtcttt
gaagactcagggcccgggcggcctctcagctgcttcatggaggagcccatgccatacaca
gatcctacaggagccgctggcgggggcaactgccgtgcacttgagtcaccaaatcaggaa
caacggctccaagcacagcgcatcagaaaccaagactcccgagggcacacacacacaccc
caaaatagaccacacggacaccagtcccccgacctccctgagggctacgagcaaaggacc
accgtgcagggccaagtctattttctgcacacacagactggcgtgagcacctggcatgat
cccagaataccccggtgtaccaacatctctttaagggatttgaacagcgtgagttgtgag
gagctgggccctctgccgcccggctgggagatcaggagcactgtgtcaggacgaatttat
tttgtcgaccataataatagaaccacgcaattcactgaccccaggttacaccacatcatg
agccaacactctcaggggaaggagtcgagccagcctctgcctgtacagatggaggtcggt
atggaggagggtgacggggagctaccagtgcgctacgagagagatctggtccagaaactt
aaagttctccgccatgagctctccctgcagcagcctcaagctggccactgccgcatagaa
gtgtcccgtgaggagatctttgaggagtcttatagacagatcatgaagatgagacccaaa
gacctgaagaagcggctgatggtgaagttcagaggcgaggaggggctagattacggtgga
gttgctagggaatggttatatctcctctgccatgagatgctgaatccatactacggcctg
tttcagtactccactgataacatctacacactacagatcaacccagactcatccatcaac
cctgaccacttgtcttacttccactttgttgggcggattatgggtctggctgttttccac
gggcactacatcaatggaggcttcaccttacccttctacaagcagctcctgggaaagccc
atccagctttgtgaccttgagactgtggacccagagctgcacaagagcctcgtctggata
ctagagaatgacatcgcatctgttttggaccacaccttctgtgtagaacataatgctttt
ggcaaattcctccaacatgagctgaaaccaaacggcaagaacatcccagtcacagaggag
aataagaaagaatatgtgaggctgtatgtcaactggagattcatgcgaggcattgaggcc
cagttcctcgccctgcagaagggcttcaacgaactcataccacagcatctgctcaagcct
tttgacaacaaggaacttgagctgatcatcggtggtttgggcaagatcgatctgaacgac
tggaaggccaacacacggctgaagcactgtgtggctgacagtaacatagtgaagtggttc
tggcaggcggttgaatcgtttgacgaggaaaggagaggcagactgctacagttcgtcaca
ggctccacacgcgtccctctacaaggcttcaaagcactgcaaggttctacaggttctgca
ggaccaagactcttcactattcatttaattgacgccaacacagacaacctgcccaaagcc
cacacatgcttcaaccggatcgacatcccgccttacgagtcatacgagaagctctacgag
aagctcctgaccgcggtggaggagacgtgtggctttgcagtggagtga
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