Cyprinus carpio (common carp): 109051059
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Entry
109051059 CDS
T05134
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109051059
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109051059
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
109051059
NCBI-ProteinID:
XP_042570143
Ensembl:
ENSCCRG00000004608
UniProt:
A0A9Q9ZQF4
LinkDB
All DBs
Position
A24:12228831..12298507
Genome browser
AA seq
1108 aa
AA seq
DB search
MQFGKEFMRQNSFYKCVINEEETDLDSADVFELAFKGKASAIDHLSRKNLEHLSFRDENG
ASPLHYASAGGHLDIIRLIVSVVGPEELNVQDEQGRTPLHWAVEQDQLHSCALLLELGAD
PNILNSAMMGPLHLAVTKKYNHLVEVLLQSCDKTDANLEGDLGNTPVMLACCTNNCDAIQ
FLFKHGAKMCIQNKLGHYAIHTVAFAGAKEAMELVLKIGEELGLSTSVHINYLDKSKSTP
LHLAVRGGNIEVIKLCIIKGARVDQQQCDKSTALHFACTQGALEAVKIMLSSYNKVEDII
NIRDGANQTPLHRATLFDHVELVEYLISKEAEIDCIDCNGLSPLLMASRCGAWKTVAFLL
SIGADFRIKDKVGCNFLHFVVLQPKGLKNLPETVLQSNAVKEMLSDEDVEGCTPLHYACK
LGIHDSVKNMLGLNIFVGQKSREKKSALHFAAEYGRINTCKRLLETLTDSKMLNDWDEKG
LTPLHLASMAGHTQVVELLLRSGALFQSDYKGWSCLHHAAAEGYTETMKILLAANVKLLD
ETNEDGNTALHIAAQAGHVSAVMLLLDMGAEISLNNADNSFLHEAVRNEKKDVVNAVIES
ERCGEAIKSFKATSSCPVMDIIEFLPESFKHLLDRCILESDHDANSPDYHIKYDFQWLQA
PIQSMKYARADKAIKFQPLAAMNAMVRYNRLELLTHPVSRKYLEMKWKVYGSKVHLLNLA
VYLLGLLPLTYLILNLRPKQEVFGNNTSVIMVPISFREQKSLISVCIIMVLVFNVYSICK
ELVQLAQQRINYFTDFSNPADWGAAISSLVFVIPMCFNLENTWQWEAGAFAILTSWIAFL
LYFQRFERIGIYVVMFGGIVRTLLCIMILFIFLLLAFGLAFYALMLHQDEFSSISLALAQ
TFVMTVGELNYQSTFQNAYENGRMAFPGVTYFIFVIFVLLMPILLMNLMIGLAVGDIAEV
QRNAELKRIAMQIDLHTALEKKLPYWFLKRVDKPTITIYPNKCKKVLMQALIEGEIQNTV
RTRLKLCSRQGGPLERELHKQKNRLKAMSCVLEKQHNLLKLIIQKMEITSEADEYDGPHN
PRALKQPTSSSSQKSKWVPLLQAIKAKK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttggaaaggagtttatgaggcaaaacagcttctacaaatgtgtgataaatgag
gaggaaacagatctggattctgcagatgtgtttgagttggctttcaaagggaaggcctct
gccatcgaccaccttagccggaaaaatctggaacaccttagcttcagggatgagaatgga
gctagtccactacactatgcttcagccggaggacacctggacataattcgcctcattgtt
tctgtcgtgggccctgaggagctgaatgtacaggacgagcagggcagaactcctctgcac
tgggctgtagagcaggatcaactgcatagctgtgcattactgctggagctgggtgctgac
cccaacatcctcaacagcgccatgatgggccctctgcatctggctgtcacaaagaaatac
aatcatctagtagaggtccttttacagtcctgtgacaaaacagatgccaatctggagggg
gatctgggaaacacccctgtgatgctggcctgctgcactaataactgtgatgctatacag
tttcttttcaaacatggtgccaagatgtgtattcagaacaaactgggtcactacgctatc
catacggttgcttttgcaggtgccaaagaggccatggagctggttttgaaaattggagaa
gaactgggcctttccacttcagtgcacattaattatttggataagtccaaaagtactccc
ctccatctggctgtacgtgggggcaacattgaggtgatcaaactttgcatcattaaagga
gccagagtggatcagcaacagtgtgacaaatccacggccctccactttgcctgcactcag
ggtgctctggaagccgtcaaaatcatgctttcttcttacaacaaagtggaagacatcatc
aacatcagggatggagccaatcagacccccttacatagagccacgttgtttgatcatgtc
gagttggttgaatatcttatttcaaaggaagcagaaattgactgcattgactgtaatgga
ctgtctcctctgctgatggcctccagatgtggtgcttggaaaacagttgcgtttttgctg
tcaattggtgccgatttcagaatcaaagataaagtaggttgcaacttcctccactttgtc
gtccttcaaccaaaagggctgaaaaatcttcccgagacagtcttacagagtaacgccgtg
aaggagatgttgtctgatgaggatgttgaaggctgcactcctctgcactacgcctgcaaa
cttggcatccacgattcggtcaaaaatatgttgggtctcaatatctttgtgggtcaaaag
tcacgcgagaagaaatcagcgcttcacttcgctgcagaatatgggcgtataaacacatgt
aaaaggctgctggagaccctcacagactctaaaatgctgaacgattgggatgaaaagggt
ctgacgcccctccatcttgcttcaatggcaggacacactcaagttgtggagctgctgctc
aggagcggtgcactgtttcaaagtgattacaaaggctggtcctgtttacatcatgctgcg
gctgagggatacacagagacaatgaaaatcctcctggcagccaatgtcaaacttctggac
gaaacaaatgaggatgggaacacagcccttcacatagctgcacaagcgggacatgttagc
gctgttatgctgttattggacatgggagctgaaatcagtctcaacaatgctgacaactct
tttttacatgaagctgtgcgtaatgagaaaaaagatgtagtgaatgctgtcattgaaagc
gagaggtgtggcgaggcaataaagtcatttaaagcaacatccagctgtcccgtgatggac
atcatagagttcctcccagagtcttttaagcaccttctggaccggtgtattttagaatct
gatcatgatgccaacagtccggattatcatatcaagtatgattttcagtggcttcaggct
ccaatacagtcaatgaagtatgctagagcagacaaagcaataaagttccaacctttagca
gctatgaacgccatggtgcggtacaaccgtctggagctcctcactcaccctgtgagccga
aaatatctggagatgaagtggaaggtgtatggaagcaaggttcatttgctcaacctggct
gtctacctgcttggcttgttgcccctgacatacctcatcctcaacctgagaccaaagcag
gaagtttttggaaacaacacatctgtcatcatggtgcccatatcttttagagagcaaaaa
agtttaatctcagtctgtataatcatggtgcttgtctttaatgtctattccatttgcaaa
gagctggtgcagttggctcagcagcgcataaattacttcacagacttctctaaccctgct
gactggggcgcagcaattagctctttagtctttgtcattcccatgtgcttcaatctagag
aatacgtggcaatgggaggctggagctttcgccattctgacttcatggatcgccttcctg
ctctactttcagaggtttgagcgaattggaatttacgtggtgatgtttggtgggattgtt
aggaccctgttgtgcatcatgattctctttatcttcctcttactcgcatttggattggcc
ttctatgctttgatgctccaccaggatgagttcagctccatcagccttgctttagcccag
acgtttgtgatgacagtgggagagctgaactaccagagcacatttcagaatgcttatgaa
aatggccgcatggcgttccccggagtcacctattttatttttgtgatctttgtgcttctc
atgcctattcttctcatgaaccttatgattggtttggcagtaggagacatcgcagaggta
caaagaaatgctgagttgaagaggatagccatgcagatagatcttcatactgcccttgag
aagaagctaccttactggttcctgaagcgagtggacaaaccaactatcaccatctatccc
aataaatgcaagaaagtgctgatgcaggcgctcattgagggcgagatccaaaacacagtt
cgcacccgtttgaaactctgctcacggcaaggagggcctctggagagagagctgcacaaa
cagaagaacaggttgaaagcgatgtcctgtgtgctggagaaacagcataacctgctcaag
ctgatcatccagaagatggaaatcacttctgaggctgatgaatacgacggcccacataac
cctagagctctgaaacagcccacttcctcctcatctcagaagtcaaaatgggtcccgctg
ctgcaagctattaaggcaaagaagtga
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