Cyprinus carpio (common carp): 109051211
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Entry
109051211 CDS
T05134
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109051211
03021 Transcription machinery [BR:
ccar03021
]
109051211
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
109051211
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
109051211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109051211
NCBI-ProteinID:
XP_042583417
Ensembl:
ENSCCRG00000008775
UniProt:
A0A9Q9WHC5
LinkDB
All DBs
Position
A3:complement(27253516..27264861)
Genome browser
AA seq
738 aa
AA seq
DB search
MNGEMDSSAKEPVWEQDDLLKLLDAMKVNLPEKDLAKYKTSESHLDWEKVAFNSYSGEMC
KQKWHEVSREIRKFRTLTELIVDAQDYVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYKELPERKKDKYVKDFLREKETFMLSMMKFKQDHPDLLE
NVNKKSNVPEKPKTPQQLWYSHEKKAFLKAHPDATTKDIKDNLGKQWPQLADKKRIKWIT
KSLEQKKLYEKKMREFVQQHPEMNITEENIVKSTLTKAERQLKDKFDGRPDKPPSNGYSM
FCAELMSSMKDVPSTERMVMCSQRWKLLTQSEKDVFQKRCEQKKKDYEIEMNRYLLSISE
EEQQRILSEQKMGSFKRGGGGVSPASKKKNSKAKSSTEKPKPPVSAMFIFSEEKRPKLQQ
ERPDLSDMELTRQLARMWSELSDKKKEKYKNLEIALKAESEKQSKDDKGKLPETPKTAQD
IWQQSVIGDYLARFKNDRAKAQKAMEATWNTMEKKEKIMWIKKAAEDQKRYERELIEMRS
PAPVITPGKKMKFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGEIGGRWQRLPQK
EKDRYKRLAEEKQRQYKVLLEQWLAGLSSQEKAVYKEYNSLKRRSTSKPGATPAKVKPKA
KQSDEEDDDDDDDDDDDDDDDDDEDKESDDGSSSDDSDDDDDDDNEDIEDEEVEDKENKS
ESSSSASSSDDSSGSDSD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggactcctctgctaaagaacccgtttgggagcaggatgacttgttg
aagctgttggatgccatgaaggtgaacctgccagaaaaagatctggccaagtacaagacg
tccgagtcccatttggactgggagaaagtggctttcaactcatactctggggagatgtgc
aaacagaaatggcatgaagtgtcacgtgagattcgcaaattccgcacccttactgagctg
atcgtggatgcgcaggactacgtcaaaaatccatacaaaggaaagaagctgaagaagcac
ccagacttccccaaaaagccgttgacaccgtatttccgtttctttatggagaaacgtgct
aagtatgctaaattacatccagagatgagcaacctagatctcacaaaaatcctgtccaaa
aaatacaaggagctcccggagcgtaaaaaagataaatatgtgaaagactttctcagagaa
aaagagacgttcatgctcagcatgatgaagttcaagcaagatcatcccgaccttcttgag
aacgttaacaagaagtccaatgttccagagaagcccaagacgccccagcaactgtggtac
agccatgagaagaaggcctttctcaaagcacacccagatgcgactaccaaagacatcaag
gacaatcttggcaagcagtggccacagctcgcagacaagaagaggataaagtggatcaca
aagtctttggagcagaagaaattgtatgagaaaaagatgcgcgagtttgtccagcagcac
ccagagatgaacatcacggaggagaacatcgtcaaatccactctgactaaagcagagaga
cagctcaaggacaagtttgatgggcggccagacaaaccgccttctaatggttactctatg
ttctgtgctgagctgatgtccagtatgaaagacgttcccagtacagagcgcatggtcatg
tgcagccagcgctggaaactcctcacacagagcgagaaagatgtcttccaaaagcgctgt
gagcagaaaaagaaagactatgaaattgagatgaatcgctacttattaagtatctcagag
gaggaacagcagagaatactgtcagaacagaagatgggcagctttaaaaggggaggtgga
ggcgttagtcctgcttccaaaaagaagaactcaaaagcaaagtccagtacagagaagccc
aagcctcctgtgtctgcaatgtttattttctctgaggagaagcgcccaaaacttcaacag
gaaaggcctgatctttctgacatggagctcaccagacagctggcccgcatgtggagcgag
ctttctgacaagaagaaggagaagtataaaaacctggagattgcgctgaaggcagagtct
gaaaaacagagcaaagacgacaaagggaaactaccagaaacacccaaaacagctcaggat
atctggcaacaaagtgtcattggcgactatcttgcccgattcaagaatgatcgagcaaaa
gctcaaaaagccatggaggccacctggaacaccatggagaagaaagagaagatcatgtgg
atcaagaaggcagcagaggaccagaagagatatgaaagagagctgattgagatgcgatcg
ccagccccagtcatcacccctgggaagaaaatgaaatttgatggggaacctaagaaaccg
ccctcgaacggttatcagaagttctctcaggagatgctctcaaacggcgagctgaatcat
ctgcccatgaaagagcgcatgggtgaaatcggaggccgctggcagcggctccctcagaaa
gagaaggaccgttacaaaagactggcagaagagaaacagaggcagtacaaagtgctgctt
gagcagtggcttgcgggtttatcatcacaagagaaagctgtatataaagaatataattct
ctgaaacggaggagcacatcaaaaccaggtgccactcctgctaaagtgaaacccaaggcc
aaacaatcggatgaggaagatgatgatgacgatgacgatgatgatgatgatgacgatgat
gatgatgacgaagataaggaatctgatgacggatcatcctctgatgacagtgatgatgac
gacgatgatgataatgaagacatagaggatgaagaggttgaggataaagagaataagtca
gaaagcagcagcagcgcttccagctctgacgattcatcgggttcagactcagattga
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