KEGG   Cyprinus carpio (common carp): 109051223
Entry
109051223         CDS       T05134                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109051223 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109051223 (xrcc1)
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109051223 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 109051223
NCBI-ProteinID: XP_042597798
UniProt: A0A9Q9X9M9
LinkDB
Position
B16:29132258..29149438
AA seq 600 aa
MSVMQSIRETKKEEGKKEREGNTLAFWTKGIAKHTIHSIDIGNEGSAFIEVLVGHSTSVK
DQDFQVLLVTSSFMSPTESRNVLMHLSGVRFSGLPSQLLKATAQEKWDCVKIVCSQPYSK
SLAYGVAFIKLHSPPDADDVPVSTPPKLTKLGQFRVKDESPSSGSNIQPGSLFFSRDSAA
KASTGLKVSPQNDRLSYAAAALKSEGASTQTSPSSSQQAPVKRKFEFSKERLEAAGPPPK
KPSSSGSSEPNSATPRSKARTGATASPASSASPAQKTSDKRESPKSKPEPKPKPKAKSAE
PVPFNRILEGVVFVLSGFQNPFRGELRDKALAMGARYRPDWTPDSTHLICAFANTPKYSQ
VKAAGGVIVRKEWVMDCHKTKQKISFKRYNIDVVESSSESEAEDDESEEETQKPKTPEKR
QTTPKKQPIKEEEEEEEDGGSTDAGGPEDDGSGMDTEDELNRVEMESRRKKALKESASVQ
VKDEDPYGGSTDENTDAEEEEDKPIPELPDFLTGKRFYLYGKFPDNQKRQLQRYIIAFNG
AVEDYMSEKVQFVITSEGWDESFEEALMENGNLSFVKPTWIFAINDRQKLLPYQPYTVVP
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgtctgtcatgcagtctatcagagaaacgaagaaagaggaagggaaaaaagaacgagaa
gggaacacattggccttttggaccaaaggaatagcaaaacacaccattcacagcatagac
attggaaacgaaggctctgctttcattgaggtccttgttggacactccacgtcagtcaaa
gaccaagactttcaggttctgctggtcacgtcgtccttcatgtcgcccacagagagccgt
aacgtgttgatgcatctctctggtgtgcgcttctcggggctgccgagccagctgctgaag
gccacggcgcaggagaagtgggactgtgtgaagatcgtgtgcagtcagccgtacagcaag
tctctagcgtacggagtcgccttcataaagctgcactctcctccggacgctgacgatgtt
cccgtctcgactcctccgaaactcactaaactgggtcagttcagagtcaaagacgagtcg
ccctcctctggctccaacatccagccgggaagcctgttcttcagcagagacagcgccgct
aaagccagcacaggactcaaggtgtctcctcagaatgacagactgagttacgccgctgct
gctctgaaatctgaaggtgcgtccacacagacgtctcccagcagctcacaacaggctcct
gtgaaaaggaagtttgagttcagtaaagagcgtctggaagctgccgggccgccgcccaaa
aagcccagttcatccggttcttctgaaccaaactctgccacaccgagatctaaagcaagg
accggagcaactgcgagtcctgccagcagcgcttctccagcccagaagacatcagacaag
cgcgagagtcctaaatccaagccagagcccaaaccaaaacctaaagccaagtctgcagaa
ccggtgcctttcaatcgcatcttggagggagtggtgtttgtcctgagcggcttccagaac
cccttccgcggagagctgcgggacaaagcgctggccatgggagcccgataccgacccgac
tggacgccggactccacacacctcatctgtgctttcgccaacacgcccaaatacagtcag
gtgaaagcagcgggaggcgtcatcgtcaggaaggagtgggtgatggactgccacaaaaca
aagcagaagatttccttcaaacgatacaacattgatgttgtcgagtccagttcagagagt
gaagcagaagacgatgagagcgaggaggaaacgcagaaaccgaaaacaccagaaaagagg
cagacgacccccaaaaagcagccgattaaggaagaggaggaagaggaggaggacggaggt
tcaacagatgctggaggtccagaggatgacgggtctggcatggacactgaagatgagctg
aacagggtggaaatggagagcaggaggaagaaagcactgaaggaaagcgcatcagttcag
gtgaaagatgaagatccgtacggcggctctactgatgagaacacggatgctgaggaagag
gaggataaaccgatccctgagctaccagacttcctaacaggaaaacggttctatctttac
ggcaagttccctgacaaccagaagaggcaacttcaacgctacatcatcgccttcaacgga
gctgtcgaagactacatgagcgagaaggtccagtttgtcatcaccagcgagggatgggac
gaatcgtttgaggaagccttgatggaaaatggcaatctgagctttgtgaaacctacctgg
attttcgccatcaatgacaggcagaagttgctaccgtaccagccctacactgtcgtccct
taa

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