Cyprinus carpio (common carp): 109051245
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Entry
109051245 CDS
T05134
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109051245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109051245
03036 Chromosome and associated proteins [BR:
ccar03036
]
109051245
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109051245
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
109051245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109051245
NCBI-ProteinID:
XP_042621985
Ensembl:
ENSCCRG00000008802
ENSCCRG00000040503
UniProt:
A0A9R0B572
LinkDB
All DBs
Position
A11:complement(5625933..5646700)
Genome browser
AA seq
1637 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFEDSQTTSIPSTSRKRRRTTNIPTVDPIAVCHELYNTIRDY
KDDQGRMLCELFIRAPKRRNQPDYYDVVSQPIDMMKIQQKLKMEEYDDVEQLTADFQLLF
NNAKTYYKPETPEYRAACKLWDLYIRTKNEFVQRGDYDEDDDDDDSQENPGGATEEESIS
SLKEVLGQLLEAVLTYTEHGRLISELFQRLPSKVQYPDYYAIIKEPIDLKAIAQRIQMGF
YKSVNHMTKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFAQRKLELEHSEPIKSSIRIRN
RRFAQGDRLSSITTALQYGSESEEDAILTGSVHYDEGESEAESIHSSMDMSNPIFQMYEA
VRGCRNNQGQLLAEPFFQLPSRKDYPDYFQQISHPVSLQTIRSKMKNNEYESVEQIDTEL
NLMFENAKRYNVPSSQIYKRVLKLQHILQMKRKELTRRDDEDGDSMLSSTLSDGGSTKRK
SHKKNTKKNRMKALYAAVAEAREMGTGRRLCDLFMVKPSKKDYPDYYKIILEPVDLRTID
HNIRADRYTSEDAMMEDMRLMFRNARHYNEEGSQVYNDANILEKVLKEKRRELGPPPDDD
DIISPKLKIRKSGISPKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRAEL
PDYYLAIKKPVDMEKVKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYKDALVLH
KVLLETRRDLEGGDDTNVPDVARLIQELIRNLFVSVLGHQDDEGRCYSDSLAEIPAVDPN
NPDKTPLNFEIIRAKVDKGRYRRLDVFQDHMFEVLEKARCLHRTDSEIFEDSVELQQFFI
RIRDELCKNGEILLSPALSYTTKHLHSEVEKEKKEKLPKEYEEDKLKREEEKKEAEKSED
TAGGGWQGALQRNYSQDCSFKDNKYHVGEYVYVEPTEPNLQPHIVCIERLWQDDAGENWL
YGCWFYRPNETFHLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFVKEYFKLQPDSFRP
EDVFVCESRYSAKTKSFKKIKMWTMPLSSVKFVPREVPLPVVRVASMFAPKQDSEKPPEM
AEDGKAVPSIIDKEREDVTIEVSNGEPGCQYYEQLCYNDMWLKVGDCVYIRSHGLVRNRV
GRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPVTCIGGKCTVS
SFKDFLSCRPTEMPEEDVLLCESRYIEIEKQMKKFKGLKRFSLSAKVVEDEIYYFRKLIV
PQKEPSPLLDKKIEELEAKFADMTDEELEDLGDDDGDGSDAHCMPQLQTQLTGDMDMLHY
APPQSTPKSIKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLEATKKAEYEERAAKVAEQQERERAVHQNSPRAGTPVGALMGVVPPPTPMGMLSHSMTP
MAGMMGSYRPPMQPFQGPVDGMINMAGMPPHPMGVPTLPLCSPWGIPSMPYLGTNGMAPG
STGSTYGTQMGVMNSGQQAPPPYPGQGQVGQPALHQPSTPIFVAPPPKPQRLLHSEAYLR
YIEGLSAESTAVSKWDQTLSARRKDVRLTKEQESRLPSHWLKSKGAHRTMADALWRLRDL
MLRDTLNIQQTYNIQTL
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaaagcgacggagagccacttctccttccagcagtgtaagtggaggagatttt
gaggacagccagaccacatccataccttcaaccagtcggaagaggagaagaaccacaaac
atccccactgttgaccccattgccgtgtgtcacgagctgtacaacactatcagagactat
aaggatgatcagggcaggatgctgtgtgaactcttcatcagagcaccaaagagaaggaac
cagccggattactatgatgtggtgtctcagcccattgacatgatgaaaatccagcagaag
ctgaagatggaggagtatgatgacgttgagcagctcacagctgattttcagctcttattc
aacaatgccaagacatactacaaaccagaaactccggagtacagagcggcttgtaaactg
tgggatctgtatattcgcaccaaaaatgagtttgtgcagcgaggggactatgatgaagac
gatgacgatgatgactcacaggaaaaccctggaggggccacagaggaggagtctatctcg
agcctcaaggaagttctcgggcagcttttggaagctgtgctgacgtacacagaacacggg
cgtctcattagtgaacttttccagaggcttccctctaaagtgcaatatccagattattat
gctattattaaagaaccgatagatctgaaggccattgcacaacgaatacagatgggcttc
tataaaagtgtgaaccatatgactaaagacattgacttgttagtcaaaaatgccaaaacc
tacaatgaacccggatcacaagtatttaaagatgcaaacaccatcaaaaagatttttgca
cagagaaaactggagcttgaacattctgaacctattaaaagcagcatcaggatcaggaac
agaaggtttgcacagggagaccgactctcctccatcactactgctctacagtatggctca
gagagtgaagaggacgccatattaactggctctgttcattatgatgagggcgagtcagaa
gctgagagcatccactccagcatggacatgagcaaccccatcttccagatgtacgaggca
gtgcggggctgtaggaacaaccagggacagcttttagccgagcccttctttcagcttccc
tccaggaaagattaccccgactacttccagcagatcagccatccagtctccctccagacg
ataaggagtaagatgaagaacaatgagtatgaaagtgtggaacagatagacacagagctc
aacctgatgtttgagaacgcgaagcgctacaatgttcccagctctcaaatctacaaacgt
gtgctaaagttgcagcatatattgcagatgaagaggaaagaactaacgaggagagatgat
gaagatggagatagcatgctatcatctactctttctgatgggggcagcaccaagcgcaaa
agccataagaagaacacaaagaagaaccgcatgaaggctctgtacgctgctgtggcagag
gctcgggagatgggcacaggccggagactctgtgacctgtttatggtcaagccctcaaaa
aaagactacccggattactacaagattatactggagccagtggacctgaggaccatcgac
cacaacatccgcgctgacagatacaccagcgaagacgccatgatggaggacatgaggctg
atgttccgtaatgcacgtcactacaacgaagaaggttcacaagtttacaatgacgccaac
attctggagaaggtattaaaagaaaaacgaagggaactcggacccccgccggatgacgat
gacataatttcacccaagctgaaaattaggaagagtggcatctctcctaaaaagtccaag
tacctgactcctctgcagcagaaactcaatgaactctatgaagctgtgaagaactacacc
gacaagcgtggacggcgtctcagcaccatcttcctccgtcttccatcccgcgctgagctt
ccagactactatttggctatcaagaaacctgtagacatggagaaggtgaagagccacatg
ctggccaacaagtaccaggatgttgatgctttggtggaagacttagtgttgatgttcaac
aacgcgtgcacctacaacgaacctgaatcactgatctacaaagatgcattagtgcttcac
aaagtgcttttggagaccaggagagacttggagggaggcgatgacacaaatgtcccagat
gttgcacggctcatccaggagctcattcgcaatcttttcgtctcagttcttggtcaccag
gacgacgaaggacgttgctatagtgactcactggcagagattccagctgttgatcccaac
aatcccgataagactccattgaactttgagatcatcagagctaaagtggataagggccgt
tataggagactagatgtgttccaggaccatatgtttgaagtcttggagaaagctagatgt
ctgcacaggacggattctgagatctttgaggactctgtggagctccagcagttctttatc
cggatcagagatgaattgtgtaagaatggagagattctgctgtcgccggccctcagctac
accactaaacacctgcacagcgaagtggagaaagagaagaaagagaagctgcctaaagaa
tatgaagaggataaactcaagagagaggaagagaaaaaggaagctgagaagagtgaggac
acagcaggtggtggatggcagggagccctacaacgcaactacagccaggactgcagcttc
aaggacaacaagtaccatgtgggagaatatgtttatgtagaacccacagagccaaacctg
cagccgcacattgtctgcatagagcgactctggcaagatgatgcaggagagaactggctt
tatggctgctggttctatagacccaacgaaacatttcatcttgctacacgcaaatttctt
gagaaagaagttttcaaaagtgactattacaacaaaattcctgtcagtaaaatactgggc
aaatgtgtcgtcatgtttgtgaaggagtatttcaagcttcagcctgacagcttcagacct
gaagatgtttttgtctgcgagtctcgttattcagcgaaaaccaagtccttcaaaaagatc
aagatgtggacgatgcccttaagctcagtgaagttcgtcccacgtgaagtgccgttgcct
gtggttcgtgtggcctccatgtttgcacccaagcaggacagtgagaagcctcctgagatg
gcagaggatggcaaagctgtaccatctattattgataaggagagggaggatgttaccata
gaggtcagtaatggagagccaggctgccaatactatgaacagctctgctacaacgacatg
tggctgaaagtgggagactgtgtctacatccgctctcatgggctcgtacgcaaccgcgtg
ggacggatagagaagatgtgggtgcgagatggagccgcctactttttcggccccatcttc
atccatcccgaggagactgagcatgaacctactaagatgttttacaagaaggaagttttt
ctcagtaacctggaagaaacctgccctgtgacctgtattggagggaagtgtacagtgtct
tctttcaaagatttcctgtcatgccggccaactgaaatgccggaggaggatgtgttgctg
tgtgagagccgctacatagagatcgagaagcaaatgaagaagtttaaagggctgaagcgt
ttctctctgtcggccaaagtagttgaggatgaaatctattactttcgaaagctcatagtg
cctcagaaggagccgtctccactgctggataagaagattgaggagttggaggccaagttt
gcagacatgacggatgaagagctggaggatttgggtgatgacgatggggacggctctgat
gctcactgcatgccgcagcttcagactcagctgaccggtgacatggacatgctgcattat
gctcccccgcagtccacaccaaagtcaattaagggtctgtcaaagaaggagggggcaaag
aggaagatcaacatgagtgggtacatcctcttcagcagtgaaatgagagccgtcatcaag
gcccagcaccctgacttctcctttggagaactcagtcgactggtgggcacagagtggagg
aaccttgaggccactaaaaaagctgagtacgaagagagggcagcaaaggtagcggagcag
caggagcgagaaagagcagtgcatcagaactccccaagagcaggtaccccagtaggggcg
ctcatgggggtagtacctcccccgacccccatggggatgcttagccacagcatgacgcct
atggcaggcatgatgggtagttacaggccacccatgcagccctttcaggggcctgtcgat
ggcatgattaacatggccggcatgcctccacatcccatgggggtgcctaccttacccctc
tgctccccgtggggtatacctagcatgccatatctgggtacgaatggaatggccccaggt
tctacaggaagcacttatgggactcagatgggtgtgatgaactcaggccagcaggccccg
ccaccctacccgggacaggggcaggttgggcagcctgctctgcatcagccctccaccccc
atatttgtggctcctccacccaaaccccagcgactgctacattcagaggcttacctgaga
tatatagaaggactcagtgctgagtccactgctgtcagcaaatgggaccaaacactctct
gctcgcaggaaagatgtacggctcacaaaagagcaggagagccgtctgccctctcactgg
ctgaagagtaagggagctcacaggaccatggctgacgctctatggcgacttcgggaccta
atgctacgagacacactaaacattcaacagacctataacatccaaaccctctga
DBGET
integrated database retrieval system
