Cyprinus carpio (common carp): 109051525
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Entry
109051525 CDS
T05134
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109051525
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109051525
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109051525
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109051525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109051525
NCBI-ProteinID:
XP_042604613
Ensembl:
ENSCCRG00000012508
UniProt:
A0A8C1MJ94
LinkDB
All DBs
Position
B22:10895040..10902074
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AA seq
471 aa
AA seq
DB search
MSSHPRRVRLKPWLVSQVDNGTFPGLVWLDREAKRFQIPWKHATRHTPQQEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMKPLKIYDVCDIPQTS
SNPGSVPTYESDGDEDDVPDTPEPPPPPYPPHGMSSSPLGPVWTPPGSVSPMQPPSCPPP
SAPPSVEVWPKKEPQDVEMQPPPMELQTLTPLEAMFATPETWISSLPMTDLEVQFYYRGK
EVCPPVTVSNPQGCRLFYGDLGPIVNQEELFGPISLEQVRFPSTEHITNDKQRVFTSRLL
DVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNTPNLIERQHRVKLFCLESFLSGV
IAHQRGMLSSESPLYDIHLCFGEEWPDGRPRERKLIMVQVVPVVARMISEMFSGDCTRSF
DSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQENWPLPPSMQLPQAQH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcatccgcggcgtgtgcggctgaagccctggctggtgtcccaggtggacaac
gggacatttccgggtctggtgtggctggaccgcgaggccaaacgcttccagatcccctgg
aaacatgccacgcgccacacgccgcagcaggaggaagagaacaccatctttaaggcctgg
gccgtggagacagggaagtatcaggaaggcgtggacgagccggatcctgccaaatggaaa
gcgcagctgaggtgcgccctcaacaagagccgcgagttcaacctcatctacgacgggacc
aaagaggttcccatgaaaccgctcaagatctacgacgtgtgtgatattcctcagacctcc
agcaacccgggttcggttcccacgtatgagtcggacggtgatgaagacgatgttcctgac
actcccgagcctcctcctcctccgtatccacctcacggcatgagctcgtctcctctgggt
ccggtctggactcctccaggctctgtgtctcccatgcagccgcccagctgtcctcctccc
tctgctcctccctctgtggaggtgtggcccaagaaggagccgcaggacgtggagatgcag
ccgccgcccatggagctgcagacactcaccccgctggaggccatgttcgccacgccggag
acctggatcagctccctgcccatgacggatctggaggtgcagttttattaccgtggtaag
gaggtgtgtccgccggtgactgtcagtaacccgcagggctgccgtctgttctacggcgat
ctggggcccattgtcaaccaggaggagctgttcggccccatcagtctggagcaggtgcgc
ttcccctccaccgaacacatcactaatgacaagcagcgtgtgttcacgagccgcctgctg
gacgtcatggaccgcggactcatcctggaggtgagcggacacgacatctacgccgtgcgc
ctgtgccagtgtaaggtgtactggtccggcccctgcgcgcccaaccccaacacacccaac
ctgatcgagcgccagcacagggtcaagctcttctgcctcgagtccttcctcagcggtgtg
atcgctcatcagcgcggtatgctgtcgtctgagtctccgctctacgacattcatctgtgt
ttcggtgaggagtggcccgacggcagaccccgcgaacgcaaactcatcatggtgcaggtg
gtgccggtggtggcgaggatgatcagcgagatgttctcgggcgactgcacgcgctccttc
gacagcggcagcgtgcggctgcagatctccatcccggacatcaaggacaacatcgtgacg
cacctgaagcagctgtaccggctcctgcagacgcaccaggggcaggagaactggcccctg
cctcccagcatgcagctcccgcaggcgcagcactga
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