Cyprinus carpio (common carp): 109051737
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Entry
109051737 CDS
T05134
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03030
DNA replication
ccar03410
Base excision repair
ccar03420
Nucleotide excision repair
ccar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109051737 (rfc4)
03410 Base excision repair
109051737 (rfc4)
03420 Nucleotide excision repair
109051737 (rfc4)
03430 Mismatch repair
109051737 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccar03032
]
109051737 (rfc4)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109051737 (rfc4)
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109051737 (rfc4)
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109051737 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
109051737 (rfc4)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109051737 (rfc4)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109051737 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
109051737 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
AAA_14
DUF815
Mg_chelatase
AAA_5
SLFN-g3_helicase
RuvB_N
Gp44_lid
AAA_19
AAA_24
Kinesin
AAA_28
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
109051737
NCBI-ProteinID:
XP_042590633
UniProt:
A0A8C1LNG3
LinkDB
All DBs
Position
B11:complement(24552165..24560859)
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKGSQSVKAQKPSSSSSAGEKKQKAVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEG
ADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKSFAQ
LTAAGARPDGKPCPPFKIIILDEADSMTGAAQAALRRTMEKESRTTRFCLICNYVSRIIE
PLTSRCSKFRFKPLANHIQQERLLQICGKENLKYTTEGIEALVKVSEGDLRKAITYLQSA
ARLNTEQEITEQIIIEIAGVVPPKVIEALLQICCRGTFEKLELAVKDMIDQGYAATNVLN
QLHDVIIDEKLSDKQKSVITEKMAEVDKCLSDGADEYLQLLSLCSVIMQQATHST
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctgaaaggatcgcagagtgtgaaagctcagaaaccctcctcttcatct
tcagctggagagaagaagcagaaggcggtgccctgggtggagaaatacaggccgaagtgt
gtggatgaagtggccttccaggaggaggtggtggcagtactgaagaagtctctagagggc
gctgatctgcccaacctgctgttctacggtcctcctggaaccggaaagacgtccaccatc
ctagcggccgccagagagctttatggaccggagctgtaccgtcagagagtcctggagctg
aacgcgtctgatgaacgagggatacaggtgatccgagagaaggtgaagagcttcgctcag
ctgactgcagccggagcacgtccagacgggaagccctgtcctccgtttaagatcatcatc
ctggacgaggcggactctatgaccggcgcggctcaggcggctctcagacgcaccatggag
aaagagtctcggaccacacgattctgcctcatctgcaactacgtcagccggatcattgag
ccgctgacctccagatgctccaagttccgcttcaaaccgctggccaatcacatccagcag
gagcgtctgctgcagatctgcgggaaggagaacctcaagtacaccacagagggcatcgag
gctctggtgaaggtgtcggagggagatctcaggaaggccatcacttacctccagagcgcc
gccagactcaacaccgagcaagagatcaccgagcagatcatcatcgagatcgccggggtg
gttcctcccaaagtgatcgaggcgctcctccagatctgctgcagaggcacgtttgagaag
ctggagctcgctgtgaaggacatgatcgatcagggatacgccgccaccaacgtcctcaac
cagttacacgacgtcatcatcgacgagaagctgagcgataaacagaagtctgtcatcacg
gagaagatggctgaggtggataagtgtctgtcagacggcgcggacgagtatctgcagtta
ctgagtctctgctccgtcatcatgcagcaggccacacacagcacctga
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integrated database retrieval system