Cyprinus carpio (common carp): 109051840
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Entry
109051840 CDS
T05134
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109051840
03036 Chromosome and associated proteins [BR:
ccar03036
]
109051840
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
109051840
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
109051840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
HMG_box_5
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
109051840
NCBI-ProteinID:
XP_042573061
Ensembl:
ENSCCRG00000000875
UniProt:
A0A9Q9VXL2
LinkDB
All DBs
Position
B1:complement(27842141..27854326)
Genome browser
AA seq
704 aa
AA seq
DB search
MNETLEFNEIYQEVKGTWNDGRLRFSKHTVVYKNSKTGKVDSIPVPELTQAQWRRVCLGH
GIKLCTSTGNIYKYDGFKDTDLEKISEYFKANYKVELVEKDMCVKGWNWGTAKFNGPLLS
FEVNESPVFEIPLSSVSQCATGKNEVTVEFHQNDDTEVSLMEVRFYVPPSTGEEGSDPVE
AFAQNILSEADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDVDLTLNMNEDEVERRFE
GKLHKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGNDNMYSDSDDDQHDAYLERMKEEGKIREEANDSDDSEGESD
ESFNPGEEDDEIAEEYDSKASASESSADDGDSDGDRKKKPAKKAKFVKERKPRKKEKKAK
DSSAPKRPMSAYMLWLNSSRDRIKSENPGISITEISKKAGEMWKQLNKEKKEEWEKKAEE
AKKEYERAMREYKESGGGSSGSSKKERKKKGGKNEEKRKRKSGGGREKEKERATGNDSFK
SREFISSEESSSESDKGKRRKRKGSDVEEEVASTPPSSEESGSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagactctggaattcaatgaaatttatcaggaggtcaagggcacctggaacgat
gggcggcttcgcttcagtaagcatacagtggtgtataaaaacagtaagactgggaaggtg
gacagcattccggtgcctgagctcactcaagcccagtggaggagagtctgtctgggtcac
ggcatcaagctgtgcaccagcactggaaacatctacaaatatgatggcttcaaagacact
gaccttgagaagatctcagagtacttcaaagccaactacaaagtggagctggttgagaaa
gatatgtgtgtgaagggctggaattggggcactgctaaatttaatgggccgttgctttca
tttgaggtgaatgagagtcctgtgtttgagattccgctctccagtgtgtcccagtgtgca
acaggaaagaatgaggtcactgtggagttccatcagaatgatgacacagaggtatccctc
atggaggtgcgcttctatgtcccacccagcacaggagaggagggttcagaccctgtggag
gcatttgctcagaacattctgtcagaggcagatgtcattcaggctacaggagatgctgtg
tgtatcttcagagagctgcagtgcctcacacctaggggcaggtatgatatccgcatttat
ccgacattcctccatctgcatggtaagacattcgactacaagatcccatacaccacagtg
ctccgccttttcctgttgcctcataaggaccagcggcagatgttctttgtgatcagtctg
gacccgcctattaaacaaggacaaacccgctatcattttctcattcttctgttttccaag
gaggaggatgtcgatcttactctcaacatgaacgaggatgaggtagagagacgttttgag
gggaaacttcataaaaacatgtctggctctctctatgagatggtcagcagagtaatgaag
gccctggtcaacagaaagatcacagtgcctggaaatttccaaggtcactcaggtgctcag
tgtataacgtgttcatataaggccagttcagggctgttgtatcctctggaaagaggtttc
atctatgtgcacaagcccccagtgcacctgcgctttgaggagatcgcctgtgtgaacttt
gctcgtggaaccaccaccacccgctcctttgatttcgagatcgagaccaagcagggaaat
caatacaccttcagcagcatcgagagggaggaatatgggaaactctttgacttcgtcaat
gctaagaagttaaacatcaagaacagaggcttcaaagagaaaaagggtatgaaaggtaat
gataacatgtacagtgactcagacgacgaccagcatgatgcatacctggagcgcatgaaa
gaagagggcaagatccgtgaggaggccaatgacagtgacgactcagagggcgagagtgat
gagtcttttaatcccggagaagaagatgatgaaattgcagaggagtatgacagtaaggcc
tctgccagtgaaagcagcgctgatgacggtgacagtgatggcgatcggaagaagaaacca
gccaagaaagccaaatttgtaaaagaaagaaaaccacgaaagaaagagaaaaaggcaaaa
gacagcagcgcccccaagaggccaatgagtgcctacatgctctggctgaactctagcaga
gaccgcattaaatcagagaacccgggcatctctatcacagaaatctccaaaaaggctgga
gaaatgtggaaacaacttaacaaagagaagaaagaggagtgggaaaagaaagcagaggaa
gcaaagaaagagtatgaacgagcaatgagagagtacaaggagagtggaggaggctcctca
ggcagctcaaaaaaggagaggaagaagaaaggagggaagaatgaagaaaagaggaaaagg
aagtcaggtggtggaagggaaaaagagaaggagcgagctacaggcaacgacagctttaag
agtcgagagttcatatccagtgaggagagctcatcagagtcagacaaaggcaaaagacgg
aagcgcaaggggtctgatgttgaagaggaagtggccagcacaccgcctagctctgaagag
tccggctcagactaa
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