Cyprinus carpio (common carp): 109051899
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Entry
109051899 CDS
T05134
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar02010
ABC transporters
ccar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109051899 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109051899 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109051899 (abca1a)
Transporters [BR:
ccar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109051899 (abca1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109051899
NCBI-ProteinID:
XP_042618487
Ensembl:
ENSCCRG00000021525
UniProt:
A0A9R0B100
LinkDB
All DBs
Position
A1:32624787..32659024
Genome browser
AA seq
2268 aa
AA seq
DB search
MTVSTQLGLLLWKNFTSRRRQTIQLLIEIIWPLFIFFILISVRLHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFIDAKKILLYSQHDK
SFAGFKGLVRALRKLQRNTEGFKLKDFLRDNETLSAFLEKNATLPKHAVIQIVEANVNLE
KVLINGFGVHLRDLCNSTSLEDFVTIADKDVSQLTQNIICQSSAEWLNNAENHFLSNLDF
LKPIRKDVKSDPKIVQDVSIATDSLLESLGALAVELVSMKSWRDMRNEILYLTGNSTQSP
KHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDNDSEPVSVYDNSSTPYC
NSMMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQEFGVLRDLGGM
WEEMRPKIWNFMENSEEMDLVRTLLQNNASARFFNAKLSGTDWRVEDVSSFLSKSREDTR
PHGSAYTWREVFDETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMHLLDDRKFWAGI
VFPDMQANTSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
VVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYSLTTSISLMLFDSVLYA
LMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWITSMPTNKKENAEAVCIEEEPAHL
DPGVYIENLVKVYSNGKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIQGKDIRTNLNTIRQNLGMCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKSEMEQIV
MDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SASSCRTSSSTVSFSKGSLKKEDSVSESSSDAGLGSDHESETATIDVSLISNVIFKHVPT
ARLVEDLGHEITYVLPYESAKDGAFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAEMSDGIIPARRNRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALEPSMYEEQFTFISNDAPEDRHTNKLLEALMNNPAYNEQCKDEQNIVSKSCPIKD
GDWMVPEVPESVQDIFLKGNWSIENPSPMCECSCERRKKMLPECPPGAGGLPPPQIKVTV
NETLQNLTGKNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPGDEITD
AISHIRKRFSLQEGTAPDRFLASLSIFIRGLDTKNNVKIWFNNKGWHSIGGFLNVMNNAV
LRANLPPGLDQSKFGIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEIGGVNDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAIEGVIFFCITILIQYRFCIKARPVSTKLMPIGEEDEDVARERQRILTGGGHTDILE
IKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLA
GKSVLTEIDEVHQNLGYCPQFDAISDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLG
LMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIILRVAGADPQLE
PVMEFIERELLGSTLKEKHRNMLQYQLPSSLTSLARIFNILSKNKEQLHIEDYSVSQTTL
DQVFVNFAKDQTDEDHLKDISINKNDAVVDISHLNTFLVDEKAKETVL
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctccactcagttgggtttgctgttgtggaagaacttcacttcccgacggaga
cagactattcagctgctgatcgagatcatatggccacttttcatctttttcatcttgata
tctgtcagactccactatcctccatacgagcaacatgaatgccactttcccaataaagcc
atgccctctgcggggactttaccttgggtacagggcatcatctgcaatgccaacaacccc
tgctttcgctaccccacgcctggagagacccccggggtggtgggcaacttcaatgattcc
atcatctcccgactgttcatcgatgccaagaaaattctcctctacagccaacatgacaag
agctttgcaggtttcaaaggactcgtacgggccttgcgaaaactgcagagaaacactgaa
gggttcaagctgaaggacttcctccgtgataatgaaacgttgtctgcgtttcttgagaaa
aatgcaaccctgcccaagcatgctgtgatacagatagtggaggctaacgtcaacttggag
aaggtgcttattaacggctttggcgttcatctccgagacctgtgcaattccacatctctg
gaggattttgtgaccattgcagataaggatgtgtctcagctgacgcaaaacatcatctgt
caatcatctgctgaatggctgaacaatgcagagaaccacttcctgtccaacttggacttt
ctgaagccaatacggaaagatgtcaagtctgacccaaagattgtccaagatgtgtccata
gcaacagacagtctgctggagagtttgggagcattagcggtggagcttgtgagcatgaag
agctggcgggacatgcgcaacgagatcctgtacctgacgggcaacagcacgcagtccccc
aagcacatgtaccaggccgtgtcccgcatcgtctgcggtcacccggagggcggaggcctg
aagatcaagtccctcaactggtacgaggacaacaactacaaggcgctgttcggtaactat
ggcaacgacaacgatagcgaacccgtctccgtttacgacaactcctccacgccctactgc
aacagcatgatgaagggcctggagtcgagtcccatatcccgcatgatctggagggctctg
aagccgctgctcatggggaagatcttgtacaccccagacactcctgccacccagaggatc
atacaagaggtcaataagacgtttcaggagttcggcgtgctaagggacctcggcggcatg
tgggaagagatgagacctaaaatctggaactttatggagaacagtgaggagatggacctc
gttcggacccttctccagaacaatgctagtgctcgcttctttaatgccaagctgagcggg
acagactggcgtgtggaggatgtgtccagctttctgtccaagtctcgagaggacactcgt
ccccatgggtcagcgtacacatggcgagaagtgttcgatgagacggatcaggccatccaa
accatctctcggttcatggagtgtgtgaacttggataagttggagccggtggctaatgag
gagcgtttggttaacaagtctatgcatctgctggatgaccgcaagttctgggctgggata
gtgtttcctgacatgcaggccaacacgtctgacctgccacccaacgtcaactacaagata
cgcatggacattgataatgtggagcgcaccaacaagatcaaggatgggtactgggatccc
ggtcctcgagcggacccgtttgaagacctgcgctacatttggggcggattctcctacctg
caggacgtgattgaacacgggatcatacgagctctgaccggcagcaaggagaaaacggga
gtttacatccagcagatgccttatccctgctatgtggatgacatcttcctgcgggtaatg
agccgctccatgcctctgttcatgactctggcctggatgtactcagtggccatcatcatt
aagggtgtggtgtacgagaaggaagcccggctcaaggagaccatgaggattatgggttta
gataatggcatcttgtggctgagctggttcattagtagtctgatcccactgctcatcagc
gccgccctactggtgctcatcctgaagatggggaatctcttgccgtacagtgatcctggt
gtagtctacttgttcctggcctcgtttgcagtcgtgaccatcatgcagtgtttcttgatc
agcacgctcttctcccgcgctaacctcgccgcggcctgcgggggcatcatatacttcacc
ctctatcttccctatgtgctttgcgtggcctggcaagattatgtcggctttggtgccaaa
gtagtagtgagtctcttgtctccggtggcgttcggcttcggctgcgagtactttgctctg
ttcgaggagcagggtgtgggcatccagtggagtaacctgctgtccagccccatgcaggag
gacagctacagtctcaccacttcaatctcgctcatgctcttcgattctgtactgtacgcc
ctcatgacctggtacattgaagctgtgtttccaggtcaatatggcatcccacgaccctgg
tatttccctttcaccaagtcatactggtgcggagagaaatgtggttggattacatcaatg
ccgaccaacaagaaagaaaatgctgaagctgtatgcattgaagaggaaccggcccatctg
gatccaggtgtttacatcgagaacctggtgaaggtctacagcaacggcaaactagcagtg
gatgatttgactctgggtttttatgagggtcagatcacctccttcctggggcacaacggc
gctgggaaaaccacaaccatgtctatcctcactggcctgtttccacccacatctggcacc
gcttacatccagggcaaagacatccgcaccaatctgaacactattcgtcaaaacctgggc
atgtgtccgcagcataacgtcctgtttagcatgctcaccgtggaggagcacatctggttt
tatgcacggctgaagggtttgtctgaagagaaggtgaaatcagagatggagcagatcgtg
atggacctcggcctgcctcataaacgcaaatctcgaaccagccagctctcaggaggaatg
cagaggaagttatcagtagcgctggcgtttgttggagggtcaaaggtcgtgatcctggat
gagcccacagctggagtcgatccttacgctcgccggggcatctgggacctgctgctgaag
tatcgtcaaggacgcaccatcatcctgtccacccaccacatggacgaagccgatatcctg
ggggatcgcattgctatcatctcccacgggaagctgtgctgtgtgggttcctctctgttc
ctcaagacccagctggggacgggatactacctgacgctggtgaagaaggacttcgatctc
tccgcaagctcctgccgcacctccagcagcaccgtctccttctccaaaggaagcctcaag
aaggaggacagtgtatccgagagcagttctgatgctggactgggcagcgaccatgaaagc
gaaaccgcaaccatagatgtctctctgatctccaatgtgattttcaagcacgttcctaca
gccagactggttgaagatctcgggcacgagatcacgtatgttctgccttacgagtcggcc
aaagatggagcgtttgtggagctcttccatgagatcgacgaccggctcactgacctgggc
atttctagctacggcatctctgacacaaccctggaggagattttcctcaaggtggcagag
gacaatggtgttgatgctgagatgtcagatgggattatacctgcacgcaggaaccgcaga
catgcttttggtgaccatcagagctgcctgaagcctttcactgaagacgacttcgatttc
aatgactcagaaggtgatccagaatctcgtgagacggactggctgggcggcgctgatggt
aaaggttcgtaccaggtgaagggctggagtttgaagagacagcagtttgtagctttgctc
tggaaacgcttcctgtacgcccgacgctcccggaaaggtttctttgctcagattgtgctt
cctgctgtgttcgtgtgcatcgctctggtcttcagtctcattgtccctccattcggaaag
tatcccagtctcgctctggagcccagcatgtatgaggagcagttcaccttcatcagcaat
gatgcgccagaggacagacacacaaacaagttactcgaagctctgatgaacaatccggct
tacaacgaacaatgcaaagatgagcaaaacattgttagcaaatcatgcccgattaaagat
ggagactggatggttccagaagttcctgagagcgttcaggacatattcctgaaagggaac
tggagtatagaaaacccatcacctatgtgtgagtgcagttgtgaaagaaggaaaaagatg
cttccagagtgtccaccaggagcaggtggtctgccaccgcctcagatcaaagtcaccgtt
aatgaaaccttgcagaatctgacaggcaaaaacatttcagactacttggtgaaaacatat
gcacagattattgggaaaagcttgaagaacaagctctgggtcaacgaattcaggtatggt
ggattctcattgggtgctagaagctcacaggccctcccccctggtgatgagatcactgat
gccatctctcacattcgtaaacgcttcagtcttcaagaaggaaccgcacctgaccgcttt
ctggcaagtctgtcaatttttatccgaggtctcgataccaagaacaatgtgaagatctgg
ttcaataataagggctggcacagtatcggagggttcctcaatgtcatgaacaatgccgtc
ctgcgtgctaatctgccccccggcctggatcagtccaaattcgggatcaaagcgttcaac
catccgctcaacctcaccaaagagcagctctcacaggtggcactaatgactacctcagtc
gacgtgctggtgtccatctgtgtcatcttcgccatgtccttcgtaccggccagctttgtg
gtgttccttatccaggagagagtgaataaagccaaacacatgcagttcatcagtggagtg
cagcccttactctactggctggccaactttgtgtgggacatgtgcaactacattgtccca
gcgaccctggtcattatcatcttcgtctgtttccagcaagaggcctacgtgtcctccacc
aatcttcctgttctcgccctcctgctcttgctctatgggtggtccataacacccctgatg
tacccagcatcattcttctttaagattcccagtacagcgtatgtggttttgaccagcgtt
aacatcctcattgggataaatggcagtgtgtccacgtttgtcctggagcttttcggcagc
aatgagattggtggcgtcaacgacatcttgaagaacgtgttcctgatcttccctcacttc
tgtctgggcagaggtctgattgacatggtgaagaaccaagctatggctgacgctctggag
agatttggtgagaatcgattccgctctcctctggcgtgggacatggtaggcaaaaatctc
tttgccatggccatagagggtgtgattttcttctgcatcaccatccttatccagtaccgt
ttctgcatcaaggccaggccggtcagcactaagctgatgccgatcggagaggaggatgag
gatgtggccagagagaggcagaggatcttaaccggaggaggacacactgatatcctggag
atcaaacagctcaccaaggtttataagcgaaagcagaagcccgctgtagacagactgtgt
gtgggcatcccaccgggagagtgttttgggttgctcggcgtgaacggagctggaaagaca
agcaccttcaaaatgctgacaggagattctgttgtcactagcggagaggcctacttggca
ggaaagagcgtgctgacagagatcgatgaagtgcatcagaatttgggctactgtccacag
tttgatgccatcagtgatctgctgactggacgagaacatttggagttttacgccattctg
cggggcgtcccagagaaggaagtgtgcgaggtggcagattggggcattcgtaaactgggc
ctgatgaagtatgtagacaaagcagcaggaagctacagcgggggaaacatgaggaagctc
tccacagctatggcactcatcggaggaccgccagtggtgttcttggacgaacccaccact
gggatggaccccaaagcccggcgtgccctgtggaactgcattctcagcatcattaaagag
ggacgctcggtcgtcctgacctcacacagtatggaggagtgtgaagcgctctgcactcgt
atggccatcatggtgaacggcaggttccgctgcctgggcagtgtgcagcacttaaagaac
aagtttggtgatgggtacaccatcatcctgcgggtggcgggggccgatccgcagctggag
ccggtgatggagttcatcgagcgggagctgctgggcagcaccctgaaggagaagcacagg
aacatgctgcagtaccagctgccctcgtcgctgacatccctcgcccgcatcttcaacatc
ctctccaagaacaaagagcagctccacatcgaggactactccgtctcacagaccacttta
gaccaagtatttgtcaattttgccaaggaccaaactgacgaggaccacttaaaagacatt
tccattaataaaaacgatgccgttgtggacatttctcacctgaacaccttcctcgtagac
gagaaggccaaagagactgtgctgtga
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integrated database retrieval system
