Cyprinus carpio (common carp): 109052468
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Entry
109052468 CDS
T05134
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04136
Autophagy - other
ccar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109052468
04136 Autophagy - other
109052468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109052468
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109052468
Membrane trafficking [BR:
ccar04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109052468
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109052468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_EML
WDR54
RMC1_N
Beta-prop_TEP1_2nd
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
109052468
NCBI-ProteinID:
XP_042623011
Ensembl:
ENSCCRG00000028697
UniProt:
A0A9Q9YML5
LinkDB
All DBs
Position
A12:complement(739904..745546)
Genome browser
AA seq
385 aa
AA seq
DB search
MDCIHRGGESPDVYIAERLFSSSLMVLVSRSTPFRMNIYHFKKSTEICNYSYSSNILAVK
LNRQRLIVCLEEALYIHNIKDMKLLKSLLNTPPNPKGLCALSVSLSSSYLAYPGSFTAGE
VTLYDALNLNTVTVISAHASHVAAIAFSASGTSLASASERGTVIRVFSVPDGVKLFEFRR
GMKRYVSISSLSFSADTQFLCASSNTETVHIFRLEHHSPSQESPSWSAYMGKMFSAASTY
LPSQVSEMMHQDRAFATVRLSVAGVRNIAALSMIQKVLCLLVASLDGHLYIYNIDPQEGG
DCPLVKKHRLFDGDDEAELEACGPSYAAAVATCTNPDPASSSALAGYCEDVGVKRGELIP
EHEFADGPVCLDDEQEFPPVSFQNS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggattgcattcatcgaggaggtgaaagccctgatgtgtatatagcggagcggctcttc
tccagcagtctgatggtgctcgtgagcagatccacacccttcagaatgaacatctaccat
ttcaagaagagcacagagatctgtaactacagctactccagcaacatcctcgctgtcaaa
ctcaaccgccagaggcttatagtttgtctggaggaggccttgtacatccataatatcaag
gacatgaagcttctcaagtctcttctcaacacgccaccaaaccccaaaggtctctgtgca
ctctctgtcagtctttccagctcatatctggcatatccagggagcttcacagctggagaa
gttactctgtatgatgctctgaatctgaatacggtgacggtgatctcggctcacgccagt
cacgtggcagccatcgcattcagtgcttcaggaaccagtctggccagcgcttctgaaaga
ggcactgttataagagttttcagcgtccctgatggagtcaaactgttcgagttccgccga
gggatgaagaggtatgtcagcatcagttccctgtcgttcagtgcagacacacagtttctc
tgtgcctccagcaacacagagaccgtccacatcttcagactggagcaccacagtcccagc
caggagtctccgtcgtggtctgcatacatggggaagatgttttcagcggccagcacctac
cttccctctcaggtgtcagagatgatgcatcaggacagagcgtttgctaccgtccgcctc
agtgtggccggcgtgaggaacatagcggctctttccatgatccagaaggttctgtgtctt
ctggtggcctcattagatggtcatctctacatctacaacatagatcctcaggaaggagga
gactgtcctttagtgaagaagcacagactgtttgacggcgatgatgaagcagaactggag
gcctgcggcccgtcttacgctgcagctgtagccacatgcacgaatccagaccctgcgtct
tctagtgccctcgcaggttactgtgaggatgttggtgtgaagagaggagagctgatccca
gagcatgagtttgcggacggacctgtctgtctggatgatgaacaggagtttcctcccgtt
agctttcagaacagctga
DBGET
integrated database retrieval system
