Cyprinus carpio (common carp): 109052844
Help
Entry
109052844 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109052844
Pattern recognition receptors [BR:
ccar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109052844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
NLRC4_HD2
Motif
Other DBs
NCBI-GeneID:
109052844
NCBI-ProteinID:
XP_042621297
UniProt:
A0A9Q9YJD1
LinkDB
All DBs
Position
A1:38284798..38340135
Genome browser
AA seq
1168 aa
AA seq
DB search
MEISERSSSPDPSCVSLKSDWSLDKPPNLSAGPVTSDPRVTRKKRKRSSSPEPSCVSLKS
DWSLDKPPNLSAGPVTSDPRVSRRKRSSSPDPSCVSLKSDASMIEPPRFSAEPVTSDPRD
DQIRAQDPPQAVNDELQRVKEQHKTSMKNKYERLFEGLKLQENESLLNSIYTQLYIIEGE
REGVNEEHEVLQMEKXRRTQPSQDTPIYCNDIFKASAEAGCEEKXQIKTVLTKGIAGIGK
TVSVQKFILDWAEGKXQQDVDFMFVLPFRELNLIGDHQYSLHRLLLDFHPELQDLDSQIY
EEWCKVVFIFDGLDESRITLMFSDAQKVCDVTETSSVAVLMSKLMKGELLPSALIWITSR
PAAANQIPSEYIHRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLHIMCHIP
VFCWISSTVLQKLLEEDLSAEIPQTLTEMYIHFLLIQINMRKQKYEERDSEKLLQFNREV
IVKLAEVAFKQLMKGNVMFYEEDLIESGIDVTEASVYSGICTEIFKQESVIHQRKVYSFI
HLSVQEFLAAFYLLYCYLTKNQEPLHEFRSSLHEFRSYRFNKDSLYDLLRSAVNKALKSK
NGRLDLFLRFLLGVSLESNQRLLQDLLTHTENSSWIIRETTQYIKEMIKDPYNSYHLSAG
TYIGLLLCLLEVKDQTLFREIQEFVKSDKHSEEKLSPAHCSTISYMIQMSEEPLDELNTM
KYNTSAEGRRRLIPAVINCRKALLAGCNLTAQCCERLSSALQSSNCVLRELDLSNNDLQD
SGVKFISDGLKSPNCQLQILSLAGCNLTAQCCERLSSALQSSNCVLRELDLSNSDLQDSG
VKFISDGLKSPNCQLQILSLAGCNLTAQCCERLSSALQSSNCVLRELDLSNNDLQDSGVK
FISDGLKSPNCQLQILRLSGCMVTEEGCGYLSSALSSNPSHLRELDLSYNHPGQSGVQLL
NHKLQDPNYKLQILNVDHGGEKMMRAGLRKWACDLTLDPNTAHTRLVLSDENKKITGVED
RQPYPDHPERFDVPQVLSVESLTGRCYWETEWSGDGADISVTYKGINRKGGSDCVFGLND
KSLSLICTDNIFFVRHNNKNTDIPVVPSSCKRVGVYVDESSGSVSFYSVSDTHTLTHLHT
FNTTFTEPLCAGFRDYYGSSVTLCDIKG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagatcagtgagagatcttcatctccagatcccagctgtgtgtctctgaagagtgac
tggtccctggataagcctcctaacctcagtgctggaccagtgacctctgaccccagagtc
accaggaagaagaggaagagatcttcatctcctgaacccagctgtgtgtctcttaagagt
gactggtccctggataagcctcctaacctcagtgctggaccagtgacctctgaccccaga
gtcagcaggaggaagagatcttcatctccagatcccagctgtgtgtctctgaagagtgac
gcatccatgatagagcctcctagattcagtgctgaaccagtgacctctgaccccagagac
gatcagattagagcccaggatcctcctcaagcagtgaatgatgaactacagagagtcaaa
gagcagcacaaaaccagcatgaagaacaagtatgagagattatttgagggactgaaactc
caggagaatgaaagcctcctgaacagcatctacacacagctctacatcatagagggagag
agagaaggagtgaatgaagaacatgaggttttacagatggagaaannacgcagaacacaa
ccctcacaagacactccaatctactgcaatgacatctttaaagcctcagctgaagcagga
tgtgaggagaagnagcagatcaagactgttcttactaaaggcatcgctggaatcgggaaa
accgtctctgtgcagaagttcattctggactgggccgaagggaaangccaacaggatgta
gatttcatgtttgtgcttccatttcgagagctgaacttgatcggagatcatcagtacagt
cttcacagacttctgctggactttcatcctgaacttcaagatctggactcacagatttat
gaggagtggtgtaaagttgtgttcatctttgatggtctggatgaaagcagaatcacactg
atgttttcagacgctcagaaagtttgtgatgtgactgagacttcatcagtggctgtgttg
atgtcaaagctcatgaaaggagagctgcttccctctgctctcatctggatcacctccaga
ccagcagcagccaatcagatcccctccgaatacatccaccgtctgacagaaattcaggga
ttcactgagcctcagaaggaggaatatttcaggaagagaatcagtgatgagcatcaagcc
agcagaatcatctcacacatcagaagagcaagaagcctccacatcatgtgccacatcccc
gtcttctgctggatctcatccactgtgcttcagaagctcctggaagaagatctgagtgca
gaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcagatcaacatg
aggaagcagaagtatgaagagagagattcagagaaactcctgcagttcaacagagaagtg
attgtgaaacttgctgaagtggctttcaaacagctgatgaagggcaatgtgatgttctac
gaggaggacctgattgagagcggcatagacgtcactgaggcctcagtgtattctgggatt
tgcactgagatctttaagcaggaatctgtgattcatcagaggaaagtctacagcttcatt
catctgagcgttcaggagtttctcgctgctttctatctgctttactgctatttaacaaag
aaccaggagccactgcatgaatttagatcttcactgcatgaattcagatcttacagattt
aataaagactctctgtatgatctactaagatcagcagtaaataaagctctcaagagtaag
aatggacgtctggatctgttcctgcggttcctgctgggcgtctcactggagtccaatcag
agactcttacaggatctactgacacacacagagaacagctcatggatcatcagagaaacc
acacagtacattaaagagatgatcaaagatccatataatagttatcatctctcagctggt
acgtatattggtttgttactctgtctgctggaagtgaaagatcagactctgttcagagag
attcaggagtttgtgaaatcagacaaacactcagaggagaaactctctcctgctcactgc
tcaacaatctcctacatgattcagatgtcagaggagccgttggatgaactgaacaccatg
aaatacaacacatcagctgaggggagaagaagactgataccagctgtgatcaactgcaga
aaagctcttcttgctggctgtaatctcactgctcagtgttgtgagagattgtcttcagct
cttcaatcctcaaactgtgtcctgagagagctggatctgagtaacaatgacctgcaggac
tctggtgtaaagtttatttctgatggactgaagagtccaaactgtcagctgcagatactg
agtcttgctggctgtaatctcactgctcagtgttgtgagagattgtcttcagctctacaa
tcctcaaactgtgtcctgagagagctggatctgagtaacagtgacctgcaggactctggt
gtaaagtttatttctgatggactgaagagtccaaactgtcagctgcagatactgagtctt
gctggctgtaatctcactgctcagtgttgtgagagattgtcatcagctctacaatcctca
aactgtgtcctgagagagctggatctgagtaacaatgacctgcaggactctggtgtaaag
tttatttctgatggactgaagagtccaaactgtcagctgcagatactgaggttgtctggc
tgtatggtgacagaggaaggctgtggttatttgtcttcagctctgagttcaaacccctca
cacctgagagagctggatctgagctacaatcacccaggacaatcaggagtccagctgctc
aaccacaaactgcaggatccaaactataaactgcagatactcaatgtggaccatggagga
gagaagatgatgagagcaggactacgaaagtgggcctgtgatctcacactggatccaaac
acagcacacactcgactcgttctgtctgatgagaacaagaagatcacaggtgtggaagat
cgtcagccgtatcctgatcatccagagagatttgatgttcctcaggttctgagtgttgag
agtctgactggacgctgttactgggagactgaatggagtggagatggtgctgatatatca
gtgacatataaaggaatcaacaggaaaggagggagtgactgtgtgtttggattaaatgac
aaatccttgagtctgatctgcacagataatatattctttgtccgtcacaataataaaaac
actgatattcctgttgtcccttcatcctgtaagagagtaggagtgtatgttgacgagtcg
agtggctctgtgtctttctacagtgtctctgacacacacacactcacacacttacacaca
ttcaacaccacattcactgaacccctctgtgctggatttagagattattatggttcctca
gtgactctgtgtgatattaaaggatag
DBGET
integrated database retrieval system
