Cyprinus carpio (common carp): 109052976
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Entry
109052976 CDS
T05134
Name
(RefSeq) thyroid hormone receptor alpha-A isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04080
Neuroactive ligand-receptor interaction
ccar04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109052976
04081 Hormone signaling
109052976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109052976
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109052976
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109052976
Nuclear receptors [BR:
ccar03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
109052976
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109052976
NCBI-ProteinID:
XP_042578914
UniProt:
A0A9Q9W8R6
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Position
A3:20960823..20997218
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AA seq
415 aa
AA seq
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MEHKEQELNLPEGDETWWPNGVKRKRKNSQCSMKSTSVKIISVPGYVPSYLEKDEPCVVC
GDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDNCCIIDKITRNQCQLCRFKKCI
SVGMAMEHKLVLDDSKRVAKRRLIEENRERKKKEEMVKTLHIRPEPTVSEWELIRMVTEA
HRHTNAQGPHWKQKRKFLPEDIGQSPAPTSDNDKVDLEAFSEFTKIITPAITRVVDFAKK
LPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVSREQLKNGGLGVV
SDAIFDLGKSLSQFNLDDSEVALLQAVLLMSSDRSGLTCVEKIEKCQEMYLLAFEHYINH
RKHNISHFWPKLLMKVTNLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaagagcaggagcttaacctgccagagggagatgagacatggtggccgaat
ggagtgaagagaaaaagaaagaatagtcaatgctctatgaagagcacgtctgtgaagatc
atctctgttccagggtatgttcccagctacctggagaaagatgagccatgtgtggtatgt
ggggacaaggccactggctaccattaccgctgcatcacatgtgagggctgcaagggtttc
tttaggaggacaatacagaagaatcttcacccttcctattcctgtaaatatgacaactgt
tgcatcattgataaaatcacccgcaaccagtgccagctgtgccgcttcaagaagtgcatc
tcggtgggcatggccatggaacacaagttggtgctggatgattcgaagcgtgtggccaag
aggcgtctgatcgaggaaaaccgggaacggaagaagaaagaggagatggtgaaaacactg
cacattcgacctgagcccaccgtctcagagtgggagctgattcgtatggtgacggaggct
catcgccacaccaatgcccaaggccctcactggaaacaaaaacgcaagttcctaccagaa
gacattgggcagtctccagcccccacatcagacaacgacaaagtggacctggaggctttc
agtgagttcaccaagatcatcacccctgccatcacacgagttgtggactttgccaaaaaa
cttcccatgttctctgagctgccctgtgaagaccagattatcctgctgaagggctgctgt
atggagatcatgtccttgcgcgcagcggtgagatatgacccagagagtgagacgctgact
ctgagcggggagatggctgtcagtcgagagcagctgaagaatggagggttaggagtggtg
tctgatgccatctttgatttgggcaaaagcctgtcacagttcaacctggatgactcagag
gtggcgctgctgcaggctgtactgctcatgagctcagatcgttccggactcacgtgtgtg
gaaaagatcgagaagtgtcaggagatgtacttgttagcattcgagcactacatcaaccat
cgcaagcacaacatctcacacttctggcccaagctgctgatgaaggtgacaaacctgcgc
atgatcggcgcctgccatgccagccgcttcctgcacatgaaagtggagtgtcccacagaa
ctcttccccccactcttcctagaggtcttcgaggatcaggaggtgtga
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