Cyprinus carpio (common carp): 109052994
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Entry
109052994 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin-like
KO
K06766
neogenin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04350
TGF-beta signaling pathway
ccar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109052994
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109052994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109052994
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
DCC/UNC5 family
109052994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Fn3_VIN3
NDNF
Tissue_fac
fn3_2
GH101_dom-5
Arylsulfotran_N
V-set_CD47
TMEM154
EphA2_TM
LapA_dom
Motif
Other DBs
NCBI-GeneID:
109052994
NCBI-ProteinID:
XP_042611017
UniProt:
A0A9R0ATR8
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MWLPVVKKPGSAVKNFSPFRFSTEPSDTLAVRGAPTLLNCSVHSESPAKIEWKKDGSFLS
LASDDRRQVLAEGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTIISRTARLSVAGIPRY
LSQPEAASVRVGDSHMLNCEVNPDLVSFIRWEQNKEPVELNQRVFTLPSGALVISNATEA
DAGLYRCVIDNAGPTKTSEEAEIKILPESGEERTLEFLLEPQHVSKAVGESVLLPCVVTG
HPTADVTWMHKDQLIEYRKGRFEVLGGGSLWTFNLTEEDAGVYSCMADNTNGSIEAQTEL
TLKASPQFLKKPASIYAHEATDITFECEVTGSPAPTIKWVKNGDAVIPSDYFKIIKEQNL
QVLGLVKSDEGFYQCLAENDAGNVQAGSQPNKLDQKVPIPSPPPTSLTRALPDRLMPGSR
GGAGPTPSAPRDVVASLVSTRFIKLTWRLPVEPHGDDVTYSVYYSLECNNRERIVNTSRP
GEMQVTIQNLMPDTKYSFRVVAHNRNGPGESSAPLRVATQPEVQVPGPAPNLQAVVTSPS
TVSLSWDMPLIGNGEIQNYKIYYMEKGMDSEQDLEVNTFSYSMTGLKKFTEYSFRVVAYN
KHGPGVSTEDISVRTYSDVPSAPPQNMTVEVLNSKSIMVRWQPPPADAQNGEITGYKIRY
RKGTRKSEAAEITSGSQLYQLIEGLQRGTEYMLRVSAITVNGTGPATDWTTAETFESDLD
ETTVPDVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYTIGYGIGRPHAQTIKVDYKQRYY
TIENLNPSSHNVITLKAFNNVGEGIPVYESAVTRPQSDPIDPDVDLYELFHAPYTPVPDP
VPMLPPVGVQASVLSHDTMKVTWANSLPKNQKITDARYYTVRWKTNIPANTKFKVANTTT
LTHTVTGLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFETIPSSAPKDVTVVSKEGRPTP
SIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLTHQIQELTLDTTYYFKI
QARNSKGMGPMSDAVQFRTPKAESSDKMSNDQAPGILVKQGRPSAPDQGFGSVGKADMSG
TGDNHILVIVIIVSVGAFTIILVVVGAFLCTRRTTTQQKKKRAACKSTNGSHKYKGNSKD
LKPPDLWIHHERLELKPIDKSPDPNPVMTDTPIPRTSQDITPVDGPMDPMLQRHNSYRGH
ESEDSISTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHHYHLGNLASPTRSYL
HHQSSARSTATPISHLDRAESTESVRNTPSADMHPPSGQPSCTTDLSETDISYHSSAAEE
EPAFSTPTAHVRSTHPLKSFAVPAIPAHSMYDSAALPSTPLLSQTGPHSVKTASIGTLGR
TRTPMPVIVPNAPDVSESSRLHEDAGSNYETDELTEEMAHLEGLMKDLNAITTA
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttcctgttgtgaagaaaccaggatcagcagtgaagaacttcagcccattccgg
ttctccacggagccatcggatacgctggcagtgcgaggagcgccgacgctgctcaactgc
tcagtccacagcgagtctcctgccaagatcgaatggaagaaagacggctctttcctcagc
ctggcctcagatgatcgcaggcaggtcttggccgagggttctctgctcatcagctcagtg
gtccactcgaaacacaataaacccgatgagggggtttaccagtgcgtggccactatagac
aacctgggcacaatcataagccgtacagctagactcagtgttgcagggataccgcggtac
cttagtcagccggaagccgcgtcggtgcgggtgggtgacagtcacatgctgaactgtgag
gtgaatccagacctggtgtctttcatccgctgggaacaaaacaaagagccggttgagctg
aaccagagagtcttcacgctgcccagtggtgctctcgtaatcagtaacgccacagaggca
gacgcaggcctgtaccgctgcgtgatcgacaacgctgggcccaccaagaccagtgaagaa
gcagaaataaagatactgcctgaatcaggggaggaaaggaccctggagtttctcctggag
cctcagcatgtgtctaaagccgttggagagagtgtgctgctcccttgtgtggtgacggga
catcccacagccgacgtcacatggatgcacaaagaccagctcattgagtacagaaagggc
cgctttgaagtgcttggtggaggcagtctgtggaccttcaatctcactgaggaagacgcc
ggtgtgtatagctgcatggcagacaacaccaatggatccattgaggcccagactgagctc
acgctgaaagcttccccgcagttcctgaagaagccagctagcatatatgctcatgaagcc
acagacatcaccttcgagtgtgaggtcaccggctcacccgctcccaccatcaaatgggtg
aagaacggagatgctgttattcccagcgactatttcaagatcattaaggagcagaacttg
caggtgctggggctggtcaagtcagatgaaggtttctatcagtgtttagctgagaatgac
gctggcaatgtccaggcaggttcccaacccaacaaattggatcaaaaggtacccatcccc
tccccccctcccacctcactgacccgtgcactacctgaccgtctaatgccaggctccaga
ggcggcgctggtcccacgccctccgccccccgtgacgttgtggcctccctggtctccacc
cgcttcatcaagctgacctggcgccttcctgttgaaccgcatggagatgatgtcacctac
tccgtctactacagcctggagtgcaataacagggagaggatagtgaacaccagccgtcca
ggagagatgcaagtcaccattcagaacctcatgccagacaccaagtactccttccgcgtg
gtggcccacaacagaaacggccctggagagagctcagcgcctctgagggtcgccacccag
cccgaagttcaggtacctggtcctgctccaaacctacaggcagtggtcacgtcccccagc
acagtgagtctcagctgggacatgcccctcataggcaatggcgagatccagaactacaaa
atttactacatggagaagggcatggacagtgagcaggatctggaggtgaacacattctcc
tacagcatgactggactgaagaagttcacagaatacagtttcagagtggtggcctataac
aaacatggacccggagtgtccactgaggacatatctgtgcgcacgtactctgatgtcccc
agtgctccaccacagaacatgacggttgaagtgctgaactctaagagcatcatggtcaga
tggcagcctccgccagcagatgctcagaatggtgagatcaccggctataagatccgttac
aggaagggtacgaggaagagcgaggcggccgagattacttcaggatcgcagctctatcag
ctcatagaaggtctgcagcgaggcactgaatatatgctgcgagtgtctgccattacggtc
aatggcacgggtccggctacagactggaccactgctgagacgtttgagagcgatctggac
gagacaactgtgccagacgtcccgagctccttgcatgtgcggccacttgtgaacagcatt
gtagtgagctggacgcccccggagaaccaggacattgtggtgaggggttacaccatcggc
tatgggatcggcaggccccatgcccagaccattaaagtggactacaaacagagatactac
accattgagaacttgaatcccagctcgcacaacgttatcacactgaaggccttcaacaac
gtgggggagggaatccctgtgtacgagagcgctgtcacacgaccccaatcagaccccata
gaccctgatgttgatttgtacgaacttttccatgctccatacactccagtaccagaccct
gtacccatgctgcctcctgtgggcgttcaggcgtccgttctgagccacgacaccatgaaa
gtcacctgggccaactcgctgcccaagaaccagaagatcacagatgcacgttactacaca
gtgcgctggaagaccaacatacccgcaaacacaaagttcaaggtggctaataccaccaca
ctgactcacacagtgacgggtcttaaacccaacaccttgtacgagttctcggtcatggtg
accaagggccggaggacaagcacctggagcatgactgcacatggaacaacttttgaaaca
atcccaagttctgcgcctaaagatgtgactgtagtgagcaaagagggacgacccacacca
tcaatcgtcaactggcagccaccctcagaagccaatggcaagatcacaggttacatcatt
tactacagcactgatgtgaatgcagaggttcatgactgggtcattgaaccagtagtgggg
aacaggttgacccatcagattcaagagctgacccttgataccacctactacttcaagatc
caggcacgtaactctaaagggatgggtcccatgtctgatgctgtccagttccgcactcct
aaagccgaatcctctgacaaaatgtctaatgaccaagctccaggtatattggtgaaacaa
ggaagaccctctgcaccagatcaaggttttggatcagttgggaaagcagatatgtctggc
actggtgataaccacatcctggttattgtcataattgtgtctgtgggtgcatttaccatc
atcctggtggtggttggcgctttcctgtgtacacgtcgtaccacaacacagcagaaaaag
aaacgtgcagcctgcaagtccaccaatggatcccacaagtataagggtaattccaaagat
ctgaagccaccagacctctggatccaccacgaacgtttagagctaaaacctatcgacaaa
tcgcctgaccccaatccagtcatgactgacacaccgatccccagaacctcccaggacatc
accccagtggacggccccatggatcctatgctccagagacataactcttaccgtggccat
gaatcagaggacagcatatctacactggcaggccgtcggggaatgagacctaaaatgatg
atgccctttgatgcacagccccctcagcctgtgattagtgctcaccccatccattccctc
gataaccatcaccatcattatcacttgggcaacctggcctcaccaacacgcagctatctc
caccaccagagcagcgcgcggtccaccgcaacccccatctctcatctagacagggcagag
tccacagagtcagtaaggaacacccctagtgctgatatgcaccctccgtctgggcagccc
tcctgcaccactgatctttcagagacagacattagctaccacagctcagccgctgaggag
gagccagcattcagtacacccacagcacatgttcgttccacgcacccactcaagagtttt
gcagtgcctgccatcccagctcactctatgtatgactcagcagcattacccagcactcca
ctgctgtctcagacagggcctcactcagttaaaacagcctctattggtacgttgggaagg
acgagaactcctatgcctgtcatagttccaaatgcaccggatgtctcggaaagtagcaga
ctgcatgaagatgcagggagcaattacgagactgacgagttgacggaggaaatggcccat
ctggagggcttaatgaaggacctaaacgccatcacgacagcctga
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