KEGG   Cyprinus carpio (common carp): 109053022
Entry
109053022         CDS       T05134                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-like
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109053022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109053022
   03036 Chromosome and associated proteins [BR:ccar03036]
    109053022
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109053022
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109053022
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     109053022
    Noncanonical PRC1 (PRC1.1)
     109053022
    Noncanonical PRC1 (PRC1.3/1.5)
     109053022
    Noncanonical PRC1 (PRC1.6)
     109053022
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 RING_XB3-XBAT31 zf-Nse zf-RING_5 zf-RING_4 zf-rbx1 zf-RING_6 zf-UDP TRAF3_RING zf-C3HC4_5 zf-ANAPC11
Other DBs
NCBI-GeneID: 109053022
NCBI-ProteinID: XP_042627991
Ensembl: ENSCCRG00000017828
UniProt: A0A8C1Y462
LinkDB
Position
A2:complement(10482033..10486175)
AA seq 336 aa
MTQTIQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN
TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKHQIENGSGAEDNGDSSHCS
NASVHSNQEAGPSIKRTKTSDDSGLDMDNATENGGGDMAMEGGSEIELVFRPHPTLMEKE
DSAQTRYIKTSGNATVDHLSKYLAVRLALEEMRKNGEGSPINVEAASEKQYTIYIPTANN
QFTVLNGSFSLELVSEKYWKVNKPMELYFAPTKEHK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgacacaaacgatccagacgaatggggttcaacccctcagtaagacttgggagcttagt
ctctatgaattacagagaactccacaggaggccatcacggatggtctagagatcgccgtg
tccccgcgcagcttgcacagtgagctcatgtgtcccatctgcctggacatgctgaagaac
accatgaccaccaaggagtgcctgcaccgcttctgtgccgactgcatcatcactgcgctc
agatcagggaataaggagtgtccaacatgcaggaagaagctggtgtctaagcgctccctc
cgtccagaccctaactttgacgccctgatcagtaagatctaccccagcagagatgagtat
gaagcccatcaggagagagtgttggcccgcatcagcaagcacaacaaccagcaggcgctc
agccacagtattgaagagggcctaaaaatccaggccatgaacagacttcagcgggggaag
aagcaccagattgaaaatggcagcggggcagaggacaatggggacagttcacactgcagc
aatgcatcagtgcacagtaaccaagaggccggacccagcatcaaacgaaccaaaacctca
gacgattctggactggacatggacaatgccacggagaacggaggaggagacatggcgatg
gaggggggcagcgagattgagctggtgttccgccctcacccgacgctgatggagaaagaa
gactccgcgcagacaaggtacattaagacgtcggggaacgccacagtggaccacctctcc
aaatacttggctgtcagattggctttggaggaaatgcgcaaaaacggagagggaagcccc
atcaacgtagaggcagccagcgaaaaacagtacaccatctacatccctaccgcaaacaac
cagttcacagttctgaatggctctttctctctggagctggtgagtgagaagtactggaaa
gtcaacaagcccatggagttatactttgctccaacgaaggagcacaaataa

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