| Entry |
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| Name |
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
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| KO |
| K18412 | trinucleotide repeat-containing gene 6 protein |
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| Organism |
ccar Cyprinus carpio (common carp)
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| Brite |
KEGG Orthology (KO) [BR:ccar00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ccar03019]
109053150
03036 Chromosome and associated proteins [BR:ccar03036]
109053150
Messenger RNA biogenesis [BR:ccar03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109053150
Chromosome and associated proteins [BR:ccar03036]
Eukaryotic type
Gene silencing
piRNA pathway
109053150
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
A6:1031157..1045313
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| AA seq |
2005 aa
MEDKKRKKEDKRKRETSQKVAEQKNKVPELTKPPSAQSPVTPNSASPSPGPVPSSTPSTA
TPAAGALPQGGNNAKRPVVANGQPSPGTQNSQRYMPREVPPRFRCQQDHKVLLKRGQPPL
SSMLLGGGNSGGDSPNETVASASEVMQVWNGIDPSQGPVGPAAPSLPHTSSSSSIAASSS
SNYANSMWGTSSGSQPPSQGREKVIVDRSDLEEWPSIAAGDGSKVVDTAGTGGADSSGIL
NRSASWGERHLQQQAKVVGGGNGRKGVNSSSPSPPTSSGSPNECMQSGSVWASSSHELIV
GNAVAACSLPPISKAAPLPGSSDSSLGVSCGIPGANFTPNANPSAWPALGQEGAGTVATE
GGSSSLQSSSLSASNLLSVNQASHQHQLHQMQSRDREPPCGEWGGAALEPGAGPKNTGVA
EGADMDSGSTGGGDGSTSSSSSTSSSLWKAQPLPAISKTGASRTESWEEGAGGSSVSAEG
GKAWGFAGQDDRGDLTGASAWGTGSGGQTPGVSQGAWGGDHMLAGEWGASSGVESVSNPG
GKDGSSSNSSSSGGSAGNPTTSSSTPSTMTRAWDNQKGVGDVGAGESSEWGGQGSRGGGG
TSSSSGGGNSRSGNQRQGYHRSHQPPNPEVALQNLLNRSDLDPRVLSNSGWGQRQVRQNV
AWDLEGGGGAAAPGGGDSTPTMSAPANAQPYSGSSGTTTTDPSSSSLHQGAALNANLNSN
SILGPPAVSHGEGWDNSTSNSSSSLHARGPPPSGVNIQNPVVSQSVGGVGSSAGGQGKPS
GGWGGTASSEGQGKSWDSEGHEWRECRTGSSSGRWGDFQTQGTPSTGASGWGDSQEEKGT
GGWKEKRRGDAGNWGTRGSSDWVENEPVSCGGVWGDGKGGGGTSGDSEVGTWSNWDEGAP
RGAWGTGGTGVGGDMGGKSHQGWGGKMHPSQMPNSQSASQKGPAQQQQQQSQPQQCQSVD
TGAMQGGWGRPPGPSAQSQSSGWTSGPIPHISSGPVDTLESSGWEEPSPQSISRKMEIDD
GTSAWGDPSSCNKTVNLWDKNNAPSGQAQSVSPQQGPPTLQQQPPGRMLTGLGNRDMNPA
HSTNKGPGISSSGWGGSGSPSSPCVDNGTAAWGKPTDAPISLGNPDDTGKASSWGDPSPN
PVKSGSKSMQEGWGEGEGSVSASRHSSWEEEDESGCAWNSAGSQGSSSSYNSGGWGAKKG
NKGSLKGAGDSWMNPMTRQFSNMGILGEDHSGRSLDLAPGPPQDKKMEGEKRGMGLNEYN
GEMRKGGRGGGAGAVFRSPGSKEVGACEPGPYYDKVSGQLFSSGGGMAQSRHQPGVPPIN
PSVRAQVPHQFLSPQVPGSVLKQMPPPSGGVGGVGGGIFPPQLSPQHIAMLGSIYPHHIQ
FQLACQLLLQQQPQQQQQQHLLQNQRKFPPNIRQQADPQQLARIMAVLQQQRQQQQHVGG
TGGSSKLSPSHLGGSGPKMPMSDTLTHPGLAGSVADLHQKTQGTYSGFGPGVSLSGLELG
PMVGGPAGLKDSGGQQSRFKWMMEGHSPAPSPPDSTLHKNGPIAAPLKMRGGSPYSQYEM
LGGESLGVPPQGPSDHWHRSPGNKMGAKTGTSSWPPEFQPGVPWKGIQSVDPESDPYMTP
GSMLGSSMSSLNDTEHQLLRDNTESNPSLNTLLPSPGAWPYSASESPLNNAHNPAKYTDY
KPSWPLEPIGHNKPWKTNRNSSYLPRPPPGLTHQKQPSISPWTGGGPRLGRSWGGSGGGQ
ENRFGPGSAWSDGGASKGSCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALI
RYSTRQEAAKAQSALHMCVLGNTTILAEFVSEEEVARYFAHSQAGAGGSGNGGSGAGGVP
DSGPAGVTGSSGAGAVGTISTGSGERERAGVGSLTAGGSNKSGGTGPSGSTWQSLEGTGS
SPDPASAQGAGLSIFAQWSSNGAGGSVGSNTGGVDPGRAGLWGGMTPGYTSSSLWGSPAM
EDRHQMSSPAALLPGDLLGGGADSI |
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| NT seq |
6018 nt +upstreamnt +downstreamnt
atggaagacaagaaaaggaaaaaggaagataaaaggaaacgggaaacctcacagaaggtt
gcagagcaaaaaaataaagtgccagaattgaccaagcctccatctgcacagtctcctgtc
acccccaactcagcttcccccagccctggccccgtcccctcttcaaccccatccactgcc
accccggctgctggcgccctccctcagggtgggaacaatgctaagcggccggtggtggcc
aacggacagccctcccccggcacacagaattctcagcgctacatgccccgtgaagtgccc
cctcgattccgttgccagcaggaccataaagtgctactgaagaggggccagccaccactg
tcctccatgctgctggggggaggcaacagcgggggcgacagccccaatgaaacagtggct
tctgcctcagaagttatgcaggtttggaacggcatagatccaagtcagggccctgtgggt
ccagctgctccctcactgccccatacgtcatcctcctcatcaatcgctgcttcttcttct
tcaaattatgcaaattccatgtgggggaccagctctggcagccaacccccctctcagggc
agggaaaaggtgatagtggaccggtcagacctggaggaatggcctagtattgctgctgga
gatgggtcaaaggttgtggatacagcaggtaccggaggtgcggacagtagcggaattctg
aaccgcagcgcctcatggggtgagaggcatctccagcagcaagcaaaagttgtgggagga
ggaaatgggaggaaaggagtgaattccagcagcccctccccacccacatcctctggttca
ccaaatgaatgtatgcagtctggtagtgtttgggcttcatcctcccatgaactcatagtg
gggaatgcagtagcagcatgctcattgccccccatatccaaagctgcccctctcccaggg
agctctgatagctccctcggtgtcagctgtgggattccaggtgccaatttcacccctaat
gccaatccctctgcttggccagccctaggacaggaaggagctgggacagttgcaacagag
ggtggctcctcttctctccaaagctcatctttgtctgccagcaaccttctttctgtgaat
caagcctctcatcagcaccaacttcaccaaatgcaatccagagacagagagccgccctgt
ggagagtggggtggtgcagcactggaaccaggagcaggaccaaaaaacacaggggtggca
gagggggctgatatggactctggaagcacaggtggaggggatggctccacttcctcttcc
tcctccaccagctcatcattgtggaaagctcagcctttgcctgcaatctccaaaacgggt
gcctcaaggactgaatcttgggaggaaggggcaggagggagctctgtgtctgctgaaggc
gggaaagcctggggttttgcgggtcaggatgatcgaggagatttgacaggggcaagtgcg
tggggaacaggaagtgggggtcagacccccggggtatctcagggagcgtggggtggggac
catatgttggctggggagtggggggcgtccagtggtgttgagagtgtcagcaatccaggt
gggaaagatggttcgagcagtaacagcagcagcagcggcggtagtgccggtaacccgacg
acttcctcctccacaccttcaactatgacaagagcttgggacaatcagaaaggagttggg
gatgtgggagcaggagaatcgagtgagtggggaggccagggtagcagaggtgggggaggt
acctcatcctccagtggcggagggaactccagaagtggcaatcagcgccaaggctaccac
cgctctcatcaacctcccaaccctgaagtggccttacagaatctgcttaaccggtctgac
ctggatcccagagtgctgtccaactctggttggggtcagaggcaagtccgtcagaatgtg
gcatgggatttggagggaggtggcggagcagcagcaccaggtggaggagactccacacct
acaatgagtgcacctgccaacgctcaaccatactctggttcttctggcaccacaactact
gatccatcttcctcctctctgcaccaaggtgcagctctgaatgccaacttgaactcaaac
tccatcctcgggccacccgctgtttcacatggtgaaggttgggataacagtactagcaac
agcagttcttctttgcatgcccgaggccctccaccctccggtgtcaatatccaaaaccct
gtcgtctcacaatctgtaggtggagtaggtagttcagccgggggacaaggcaagccatct
gggggttggggaggaactgcttcatcagaaggccaagggaaaagttgggacagcgaggga
catgagtggcgagaatgtagaacagggagctcgtcaggcaggtggggagatttccaaaca
cagggtactccatcaactggagcaagtggctggggagacagtcaggaggagaaaggaaca
ggtggttggaaagaaaagagacggggggatgcaggcaattggggaacgagaggtagcagt
gactgggtagagaatgagcctgtgtcatgcggaggggtttggggggatgggaagggtggt
ggaggtactagtggggactcagaagtgggtacatggagtaattgggatgagggagctcct
agaggggcatggggaactggaggtacaggggtgggtggagacatgggtggcaaatctcac
caaggctggggtgggaagatgcacccgtcacagatgccaaacagccagtcggcctcacag
aaaggcccggcacagcagcagcaacaacaatcacagcctcaacagtgtcagtccgtggac
acaggggccatgcaagggggctggggaagaccaccaggtccttcagcccagagccaaagt
tcagggtggacttcagggcccataccccatatttccagtggccctgtagacactttagag
tccagcggttgggaggagccttctcctcagtccatcagcaggaaaatggagattgatgat
ggaacatctgcttggggtgaccccagcagctgcaacaaaactgtcaacttgtgggataag
aacaatgccccatctggccaggcacaatcagtgtcccctcagcaaggacccccaacccta
cagcagcagccacctggaagaatgctaacaggcctcgggaatagggacatgaaccctgca
cattcaacaaacaaggggccaggaatatcttcttctggatggggaggcagtggctctcct
tccagtccatgtgtggacaatggtactgcagcctggggtaaacctactgatgcacccatt
agtttgggcaaccctgatgacactggcaaggcatcaagctggggggacccctctcccaat
ccagtgaagtctggttcaaagtctatgcaagaaggttggggtgaaggagagggctcagtt
agtgcttcacgtcactccagctgggaggaggaggatgagagtggttgtgcatggaacagc
gctggttcccaaggcagtagctcatcctacaactctggaggctggggagccaagaagggc
aacaagggttccttgaagggtgcaggggactcttggatgaacccaatgacaagacagttt
tcaaacatgggaattctgggagaggaccacagtggtcgttctttggatctggcccctggt
cctccgcaggacaaaaagatggaaggagagaagcgtggcatgggcttaaatgagtacaat
ggagagatgcgtaaaggaggacgcggagggggagcaggagcagtcttccgttcacctggt
tccaaagaagtgggggcatgtgaacctgggccttactatgacaaggtgagtggtcagttg
tttagtagcggaggtgggatggcacagtccaggcaccaaccaggggtgcctcccatcaac
ccatcagtacgagcgcaagtgcctcatcagttcctgtcaccgcaggtgccaggctctgtg
ctgaagcagatgcctcctcccagtggaggtgttggaggtgttgggggaggcatctttcct
ccacagctttccccacagcacattgccatgctcggcagcatatacccccatcatattcag
ttccaactggcctgtcagctgctacttcaacagcaaccacagcagcaacaacagcagcac
ctgctgcagaaccagcgcaagttccccccaaacatacgtcaacaagcagacccacaacaa
cttgctagaatcatggctgttcttcagcagcagagacagcagcagcagcatgtgggaggt
acaggaggcagctccaaactctctccttctcaccttggtggtagtggcccaaagatgcca
atgtcagacaccctcacacaccctggcttggcaggatctgtagcagacctgcatcagaaa
acacaaggaacttattctgggtttgggcctggagtgagcctctctggtctggaattgggt
cccatggttggtggcccagctgggcttaaagacagtggggggcagcagtctcgtttcaag
tggatgatggaaggtcattccccagccccctcacctcctgatagcactctccataaaaat
ggtccaattgctgctcccctcaaaatgagaggcggttctccatactcccagtatgagatg
cttggaggtgagagtttgggtgtgcctccacaagggccgtcagatcactggcacagaagt
cctggaaacaagatgggcgccaagactggcacatccagctggcctccagagttccaacca
ggagtgccttggaaaggaattcagagcgtggaccctgaatctgatccttacatgaccccc
ggaagtatgctgggctcatcgatgtcaagcctcaatgacactgagcaccagttgctaaga
gacaatacagaatcaaatccctccctcaacaccttgctgccttcacctggtgcctggccc
tacagtgcctcagaaagccccctcaacaatgcacacaacccagctaagtacacagactac
aagcccagctggccacttgagccaatagggcacaacaaaccttggaagaccaatcgcaac
agctcttatctgccacgcccacctccaggactgacccatcagaaacagccctctatttct
ccttggacgggaggaggcccacgattgggtagaagctggggtggctctggaggcggccaa
gaaaaccgatttgggcctggttctgcatggagtgatggaggagcctctaaggggagctgc
tggctggtgttgagtaatcttacccctcagattgatggctccactttgaggactatctgc
atgcagcacggtccgcttttgacctttcacctcggtttgactcaaggtagtgctctgatt
cgctacagtactcgccaagaagcagccaaagcccagagcgcacttcacatgtgtgtttta
ggtaacaccacaatccttgccgagttcgtgagcgaggaggaggttgctcggtattttgca
cattcccaggctggagctggcggaagtggcaatggaggcagcggagccggtggtgtgcct
gactccgggccggcaggcgtgacggggtcatcaggggccggggccgttggtaccatcagc
actgggagtggcgagcgagaacgggctggagtgggaagtttgacggctggaggaagcaac
aaaagtggcggaaccgggccctctggctctacctggcagagtttggaaggtacgggcagc
tcccctgacccagcctctgcccagggagcaggcctaagtattttcgcccagtggagcagc
aatggtgctggtggcagcgtgggcagcaacacagggggcgttgatcctggcagggcgggg
ttgtggggcggcatgactccagggtacacaagcagcagtctgtgggggtctccggctatg
gaagatcggcaccagatgagcagccctgcagcgctgttgcctggagacctgctgggagga
ggtgcagactctatctga |
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