Cyprinus carpio (common carp): 109053275
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Entry
109053275 CDS
T05134
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109053275
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109053275
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109053275
Nuclear receptors [BR:
ccar03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109053275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109053275
NCBI-ProteinID:
XP_042617956
Ensembl:
ENSCCRG00000016826
UniProt:
A0A9Q9YD05
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Position
A8:complement(9414623..9427481)
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AA seq
479 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAIYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERTGGLGNGVPSHAGD
EVGENGSSHSRAYSRGSSTTLSDLDDITTLPDGLFFDLPLTPEEAADYCNLELLGGSGGS
SSSSQSSPEPNRQEFSDTTRIKHEYQTVHETGLYTRSLLNPPEGCSLMEIERITQNVVKS
HIETSQYSTEELKRFAWTLYTPEEIRVYQNKSTEIMWQQCAVYITNAIQYVVEFAKRISG
FLDLCQNDQIILLKAGCLDVLLIRMCRAYNPINNTLLFDGKFASPQLFKALGCDDLVGAV
FEMTKTLSRLQLSEEEMALFSATVLLSPDRPWLTDAQKVQKLQEKVYVALQHCLRKSGAP
EEKLAKMVSKLPMMKSICNLHIDKLEFFRLLHPETAYNFPALYREVFCSEISFPDSTEG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacaaatcgaagtaatcccatgcaagatttgcggggacaagtcatcgggcatc
cactatggggtgatcacttgtgaaggctgcaagggcttcttccgccgaagtcagcagaac
aatgcgatatactcctgctccaggcagaggaactgccttattgaccgaaccaatcgcaac
cgctgccagcactgccgcctgcagaagtgtctggcactgggcatgagccgtgatgcggtg
aagtttggacgcatgtcaaaaaagcagcgtgacagcctctatgccgaggttcagaagcac
cagcagtcccaggagcgaacagggggtttaggcaatggtgtacccagccatgctggtgac
gaggtcggggagaacggcagcagccacagccgggcctacagccgaggctccagcaccaca
ctaagtgacctggatgacataaccacgctaccagacggtctcttctttgatctgccgctc
acaccggaggaagctgctgactactgcaacctagagctgctgggaggaagcggtgggagc
agttcgtcctcccagagttctcctgagccgaacagacaggagtttagtgacacgacacgc
atcaaacatgagtaccagactgtgcacgagacgggactttacactcgctcattacttaac
ccacctgaaggctgttccttgatggaaatcgaacggattacacagaatgtggtaaaatcc
cacattgagacaagtcagtatagcacagaagaactgaaaagatttgcttggacactctac
acacctgaggagatacgtgtctaccaaaacaagtccacagagataatgtggcagcagtgt
gctgtgtacatcacgaatgccatccagtatgtggtcgagtttgccaagcgcatctctgga
ttcctggacttgtgtcaaaatgaccagattatccttctcaaagcaggctgcctggacgtg
ctgttgatccgaatgtgtcgggcctacaaccccatcaataacacattgttgtttgatgga
aagttcgcaagcccgcaactctttaaagctctcggatgtgatgatctggtgggtgctgtg
tttgagatgactaaaaccctgagtcggctacagctgtctgaagaggagatggctctgttt
tccgccactgtgcttctgtctccagaccgaccatggttgacagatgctcagaaggtgcag
aaacttcaggagaaggtctacgttgcgttacagcactgtcttcgtaaaagcggtgcccct
gaggaaaaactggcaaagatggtgtccaagttgcccatgatgaagtcaatttgcaacctc
catattgataagctggagtttttccgtctccttcacccagaaacggcctacaacttccct
gctctctacagagaggttttctgcagcgagatctccttcccagactccactgagggctaa
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