Cyprinus carpio (common carp): 109053284
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Entry
109053284 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109053284
Pattern recognition receptors [BR:
ccar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109053284
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NOD2_WH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
109053284
NCBI-ProteinID:
XP_042621780
UniProt:
A0A9Q9YK98
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Position
A1:complement(38970540..39021964)
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AA seq
1191 aa
AA seq
DB search
MSSTQVEARALQEGTGVEQVQPLSSRLKVKTSCVETPFQRLKNFDKCLFKASCQSLIMEN
REKVASEILQKTLQMMDSPEPSCVSLKSDISLHHPPDLSDGALTSDLSICRRRKRSSSPD
PSCVSLKSNISMHHPPDLSDEPVTSDPSVYRDDKTRDPPQAVNDELQRVKEQHKTSMKNK
YERLFEGLKLQENESLLNSIYTQLYIIEGEREGVNEEHEVLQMEKTARTQPSQDTPIYCN
DIFKASAEAGCEEKEQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRE
LNLIRDHQYSLHRLLLDFHPELQDLDSQIYEECKVVFIFDGLDESRITLMFSDAQKVSDV
TETSSVAVLMSQLMKGELLPSSLIWITSRPAAANQIPSEYIHRLTEIQGFTEPQKEEYFR
KRISDQHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKLLEEDLSAEIPQTLTEMYI
HFLLIQINMRKQKYEERDPEKLLPSNREVIVKLAEMAFKQLMKGNVMFYEEDLIESGIDV
TDASVYSGICTEIFKQESVIHQRKVYSFIHLSVQEFLAAFYLLHCCLTKNKKPLHEFRSH
RFDSDSDEDSLYDLLRSAVNKTLESENGQLDLFLRFLLGVSLESNQRLLQDLLTHTENSS
ETIRRTTQDIKHKIKGNYHLSPDQSINLFLCLLEVKDQTLFREIQEFVKSDKHSEMFLSP
AHCSTISYMLQMSEEPLDELNLKKYNTSAKGRRRLIPAVINCRKALFSGCYLLEQHCEIV
SSALQSSNCVLRELDLSKNHLQDSDVKFISDGLKSPNCQLQILSLAGCNLTAQCCERLSS
ALQSSNCVLRELDLSNNHLQDSGVKFISDGLKSPNCQLQILSLAGCNLTAQCCERLSSAL
QSPNCVLRELDLSNNDLQDSGVKFISDGLKSPNCQLQILRLSGCMVTEEGCGYLSSVLSS
NPSHLRELDLSYNHPGQPGVQLLNHKLEDPNYKLQILNVDHGGEKMMRAGPRKYACDITL
DPNTAHTRLILSDENKKITCVEDHQPYPDHPERFDEAPQVLSVESLTGRCYWETEWSGND
AVISVSYKGINRKGVSGCWFGYNDKSWSLICTDNIFTVHHNNNDTDIPAIYSSCKRAGVY
VDVSAGSLSFYSVSDAHTLTHIHTFNTTFTEPLCAGFMIDDDSSVSLCDIK
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacacaggtggaggcacgcgccctgcaggaaggaacaggtgtagaacaggta
cagccactttcttcaagactgaaagttaaaacttcatgtgtcgagacgccatttcagaga
ctcaaaaactttgacaaatgtctcttcaaggccagctgtcagtcactcattatggagaat
agagagaaagttgcatctgaaatactgcaaaagactctccagatgatggactctccagaa
cccagctgtgtgtctctgaagagtgacatatcactgcatcatcctcctgacctcagtgat
ggagcgctgacctctgacctcagtatctgcaggaggaggaagagatcttcatctcctgat
cccagctgtgtgtctctgaagagcaatatatccatgcatcatcctcctgacctcagtgat
gaaccggtgacctctgaccccagtgtgtatagagatgataagaccagagatcctcctcaa
gcagtgaatgatgaactacagagagtcaaagagcagcacaaaaccagcatgaagaacaag
tatgagagattatttgagggactgaaactccaggagaatgaaagcctcctgaacagcatc
tacacacagctctacatcatagagggagagagagaaggagtgaatgaagaacatgaggtt
ttacagatggagaaaacagccagaacacaaccctcacaagacactccaatctactgcaat
gacatctttaaagcctcagctgaagcaggatgtgaggagaaagagcagatcaagactgtt
cttactaaaggcatcgctggaatcggaaaaaccgtctctgtgcagaagttcattctggac
tgggccgagggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagag
ctgaacttgatccgagatcatcagtacagtcttcacagacttctgctggactttcatcct
gaacttcaagatctggactcacagatttatgaggagtgtaaagttgtgttcatctttgat
ggtctggatgaaagcagaatcacactgatgttttcagacgctcagaaagtttctgatgtg
actgagacttcatcagtagctgtgttgatgtcacagctcatgaaaggagagctgcttccc
tcttctctcatctggatcacctccagaccagcagcagccaatcagatcccctccgaatac
atccaccgtctgacagaaattcagggattcactgagcctcagaaggaggaatatttcagg
aagagaatcagtgatcagcatcaagccagcagaatcatctcacacatcagaagagcaaga
agcctccacatcatgtgccacatccccgtcttctgctggatctcatccactgtgcttcag
aagctcctggaagaagatctgagtgcagaaatccctcaaactctgactgaaatgtacatc
cacttcctgctgattcagatcaacatgaggaagcagaagtatgaagagagagatccagag
aaactcctgccgtccaacagagaagtgattgtgaaacttgctgaaatggctttcaaacag
ctgatgaagggcaatgtgatgttctatgaggaggacctgattgagagcggtatagacgtc
actgacgcctcagtgtattctgggatttgcactgagatctttaagcaggaatctgtgatt
catcagaggaaagtctacagcttcattcatctgagcgttcaggagtttctcgctgctttc
tatctgcttcactgctgtttaacaaagaacaagaaaccactgcatgaattcagatctcac
agatttgactctgactctgatgaagactctctgtatgatctactaagatcagcagtaaat
aaaactcttgagagtgagaatggacagctggatctgttcctgcggttcctgctgggcgtc
tcactggagtccaatcagagactcttacaggatctactgacacacacagagaacagctca
gagaccatcaggagaaccacacaggacattaaacataagatcaagggaaattatcatctc
tcacctgatcagtccatcaatctgttcctctgtctgctggaagtgaaagaccagactctg
ttcagagagattcaggagtttgtgaaatcagacaaacactcagagatgtttctctctcct
gctcactgctcaacaatctcctacatgcttcagatgtcagaggagccgctggatgaactg
aacctcaagaaatacaacacatcagctaaggggagaagaagactgataccagctgtgatc
aactgcagaaaagctctattttctggctgttatctcttagaacagcattgtgaaattgtg
tcatcagctctacaatcctcaaactgtgtcctgagagagctggatctgagtaaaaatcac
ctgcaggactctgatgtaaagtttatttctgatggactgaagagtccaaactgtcagctg
cagatactgagtcttgctggctgtaatctcactgctcagtgttgtgagagattgtcatca
gctctacaatcctcaaactgtgtcctgagagagctggatctgagtaacaatcacctgcag
gactctggtgtaaagtttatttctgatggactgaagagtccaaactgtcagctgcagata
ctgagtcttgctggctgtaatctcactgctcagtgttgtgagagattgtcatcagctctt
caatccccaaactgtgtcctgagagagctggatctgagtaacaatgacctgcaggactct
ggtgtaaagtttatttctgatggactgaagagtccaaactgtcagctgcagatactgagg
ttgtctggctgtatggtgacagaggaaggatgtggttatttgtcttcagttctgagttca
aacccctcacacctgagagagctggatctgagctacaatcacccaggacaaccaggagtc
cagctgctcaaccacaaactggaggatccaaactataaactacagatactcaatgtggat
catggaggagagaagatgatgagagcaggaccacgaaagtatgcctgtgatatcacactg
gatccaaacacagcacacactcgactcattctgtctgatgagaacaagaagatcacatgt
gtggaagatcatcagccgtatcctgatcatccagagagatttgatgaggctcctcaggtt
ctgagtgttgagagtctgactggacgctgttattgggagactgaatggagcggaaatgat
gctgttatatcagtgtcatataaaggaatcaacaggaaaggagtgagtggctgttggttt
ggatacaatgacaaatcctggagtctgatctgcactgataacatattcactgtacatcac
aataataacgacactgatatacctgccatctattcatcctgtaagagagcaggagtgtat
gtggacgtgtcggccggctcactgtccttctacagcgtctctgacgcacacacactcaca
cacatacatacattcaacaccacattcactgaacccctctgtgctgggtttatgattgat
gatgattcctcagtgtctctgtgtgatatcaaatga
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