Cyprinus carpio (common carp): 109053352
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Entry
109053352 CDS
T05134
Name
(RefSeq) eukaryotic translation initiation factor 4B-like isoform X1
KO
K03258
translation initiation factor 4B
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109053352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109053352
03012 Translation factors [BR:
ccar03012
]
109053352
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109053352
mRNA cycle factors
Stress granule specific factors
109053352
Translation factors [BR:
ccar03012
]
Eukaryotic type
Initiation factors
eIF-4
109053352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
109053352
NCBI-ProteinID:
XP_018926296
Ensembl:
ENSCCRG00000008516
UniProt:
A0A8C1QSY0
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All DBs
Position
B6:complement(20874212..20887213)
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AA seq
608 aa
AA seq
DB search
MLPSEDAFQAKKNKKKGKTLTLNDFLANDSSGSVPPSYPSTKTTSWADETDDLDGDVSTS
WHTVEDTYRAPPIDRSILPTAPRAAREPNIDRSRLPRSPPYTAFLGNLPYDVSEESIKEF
FRGLAISQVRLPREPSNPERLKGFGYAEFDDVESFLRALSLNEENLGNRRIRVDIADQSN
DKERDSGTMFGRDRDRGRGMDSGPDKTDSDWRARPSGDQDDAPRKDDGYGDRSRDRYESD
RFRDAPRRDDRYDSGRDRFSGRDRYDDRGSRDYDRGGYDSRGGGGRRGFSSGFRRDFDGD
REERSDRREEGREERGPLQRPKLNLKPRSIPKEEEQSASLSPQSNTANSSRASSIFGAAK
PVDTAAKEREMEERLKKEQERLQKQLEEDKNRASERRPRDRDLSWRNEEPSNERRQTGSE
FSQPKGSRSQDGEHSENEVFSGQEDEPISPACSSPSSNQGGLPLKVMPAPPPKENAWAKR
STGGGANEKEGPPSAAPSNKSALKPNRSAEERVLDENQVDGIRRDKVVPQGGGGGVGRGG
AWGRGVDCPNKDEQRETADRKEVRRERDPRIASEPKKYEESAPPQFSSASKFSALLMDGD
QGEEDGEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctgccttcggaggacgcattccaagctaagaagaataagaagaagggcaagaccctg
accctgaatgacttccttgcgaatgatagcagtggcagtgtaccccccagttaccccagc
acaaagaccaccagctgggcagatgagactgatgacttggatggagatgtctcaacttcc
tggcatactgtggaggatacgtatcgagctcctcccatcgaccgctccatcctcccaact
gcacctcgtgcagcacgggaaccaaacattgaccgctctcggctgccacgcagcccaccc
tacactgccttcctcggtaaccttccctatgatgtcagcgaggaatccatcaaagaattc
ttcaggggccttgcgatcagtcaagtacgtttgccacgggagcctagtaacccagagagg
cttaagggttttggttatgcagaatttgatgatgttgaatccttcttgcgtgcgctcagt
ctaaatgaggagaatcttgggaacagacggatccgggtggatatcgcagatcaatccaat
gacaaagagagggacagtgggacaatgtttgggcgagacagggatagaggtcgtgggatg
gacagtgggcctgataagacagattctgattggagggcacggccaagcggggaccaggat
gatgcaccacgtaaagacgatggatatggtgacaggtcacgtgaccgctatgagtcggac
cgattcagagatgctccaagacgtgatgatcgttatgacagcggtcgagatcgcttcagt
ggtagagaccgctatgatgacagaggtagccgagactatgatcgtggaggttatgactca
cgtggtggtggagggcgtcgaggattcagcagtggcttcaggagagactttgatggagat
cgagaagagcgttcagacaggagggaagagggacgagaagagaggggccctctacagagg
cccaagttaaacctgaagccacggagcatcccaaaagaggaggaacagagtgcaagcttg
tctccccagagtaacactgctaattccagcagggcttcctctatatttggagcagccaaa
cctgtggacacagccgccaaggagagagagatggaggagaggctgaagaaagaacaagaa
cgactccagaaacaattggaagaggacaagaacagggcctcggagagacgaccacgagac
cgagacttgagttggagaaatgaagagccatctaatgagcgtcgacaaacaggaagtgaa
ttctcacaacctaaaggatctaggagtcaagatggtgaacattcagagaatgaagtcttc
agtggacaagaggatgagccgatctctcctgcatgttcatcaccctcttccaatcaggga
gggcttccactgaaagtaatgccagctcctccacctaaagagaacgcatgggccaaacgc
agcacagggggtggtgctaatgagaaggaaggaccaccctcagctgcccctagcaacaaa
agcgctcttaaacccaacaggtcagctgaagagagagtattggacgaaaaccaagttgac
ggcattcgaagggataaagttgtgcctcagggaggaggaggaggagttgggagaggaggg
gcttggggaagaggagttgactgcccaaacaaagacgaacagagagaaactgcagacagg
aaggaggtcagacgggaacgagatcccagaatagcctcagaaccaaagaaatatgaagag
agcgctcctcctcaattcagctccgcaagtaagttttctgccctactaatggatggagac
cagggagaagaagatggagaggaatga
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