Cyprinus carpio (common carp): 109053455
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Entry
109053455 CDS
T05134
Name
(RefSeq) thrombospondin-3a-like
KO
K04659
thrombospondin 2/3/4/5
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109053455
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109053455
09144 Cellular community - eukaryotes
04510 Focal adhesion
109053455
09142 Cell motility
04820 Cytoskeleton in muscle cells
109053455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109053455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109053455
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109053455
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Phagocytosis
Opsonins
109053455
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109053455
Exosomal proteins of colorectal cancer cells
109053455
Exosomal proteins of bladder cancer cells
109053455
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109053455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
COMP
EGF_CA
EGF_3
cEGF
EGF_MSP1_1
EGF_LMN_ATRN
EGF
Motif
Other DBs
NCBI-GeneID:
109053455
NCBI-ProteinID:
XP_042629251
Ensembl:
ENSCCRG00000016317
UniProt:
A0A9Q9YZI0
LinkDB
All DBs
Position
A16:complement(17837277..17851130)
Genome browser
AA seq
1013 aa
AA seq
DB search
MEYITALSLSLSLRLSLSPAHTAQVCSSGNISCFNASLTTLFWIFSSSLLRVLYVNMKVW
VSLFVFTFVWFAESAQKQDVPVIDVLSLEDVKQTVAAVEKISLALKTLSDVYVMSSFRLP
PKLGGVLLGLYNKQDNKKYLEVAIMSKINKILVRYVREDGKLHTVNLQSPNLADGRSQSV
ILRVGGLRREYLSLELYVNCRLADSAQRLPPLVSLPRDAELVEIRNGQKAYTRMQGSVEY
LKVSLGGTVAQAGALTDCPFQGDASSYNIVNGEVNSILGDHTKALIGQLIIFNQILGELR
EDIREQVKEMSLIRNAILECQMCGFHEPRSRCQPNPCFKGVACMETFDFPGYRCGPCPEG
MIGNGTHCQDIDECAEAQPCYTPGACVNTAKGFTCEPCPPGLWGPPLSGFGVEYAKSHRQ
ECSDIDECLDLANACTPNSICINTIGSYRCGQCKVGYVGNQTTGCFPRKSCATLSFNPCD
TNAHCIIQRNDDVTCACNVGWAGNGHTCGKDTDIDGYPDRSLPCMDNDKHCKQDNCIFTP
NSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVSNKDQQNSDTDSFGDACDNCPTVPN
IDQKDTDNNGEGDACDDDIDGDGIQNVLDNCPKVPNPMQTDRDRDGVGDACDSCPEISNP
MQTDVDNDLVGDVCDTNQDTDGDGHQDTRDNCPIIPNSSQLDSDNDGIGDDCDDDDDNDG
VPDNHAINGIGPDNCRLISNPNQKDSNSNGVGDVCENDFDNDAVMDLIDVCPESAEVTLT
DFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVN
TVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSIPFRSMAEPGLQLKAVKSRTGPGEF
LRNALWHTGDTDGEVKLLWKDPRNVGWQDKTSYRWQLIHRPQVGYIRVKLYEGTEMVADS
NVVIDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFSTHRKQVLMHIKV
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggagtacataacagctctctctctctctctctctctccgtctctctctctctcctgca
cacacagcgcaggtttgttccagtggaaatatttcgtgtttcaatgcatcgctgacgact
ctgttctggatattttcttcatcacttttgcgtgtattatatgttaacatgaaggtttgg
gtgagtctcttcgtgtttacgttcgtctggttcgcagagagcgcacagaaacaagacgta
ccggtgatagacgtgttgagtttggaggatgtgaagcagaccgtggctgcggtggagaag
atctctttagctctgaagactctcagtgatgtgtatgtgatgtcttccttccggctgcct
cctaaactgggaggagttctgctgggcctctacaacaagcaggataacaagaaatacctg
gaggttgccatcatgagcaagattaacaaaattctggtccggtatgttcgtgaagatggg
aagctgcacacagtcaatctgcagagcccaaatctggcagacggacggtctcagtctgtt
atactccgtgtcggtggcctgcgcagagagtacctgagcctcgaactctatgtgaactgt
cgtctggctgactccgcccagcggctgcccccattggtctctctgccaagagatgcagag
ctggtggagattcgtaatggccaaaaggcatacactcggatgcagggttcagtggagtat
cttaaagtgtcactagggggcactgttgcccaggctggggctcttactgactgccccttt
cagggagacgcctcttcatataacatagtgaacggtgaggttaattctattctaggtgac
cacactaaagctctgattgggcagttgatcatctttaaccagatcttgggagagctgaga
gaggacatcagagaacaggtgaaagaaatgtctctcatcaggaatgctattctggagtgc
cagatgtgtggatttcatgagccgcgttcacgctgtcagcccaacccctgcttcaagggc
gtggcctgcatggagacgtttgatttcccagggtaccgctgtggcccctgtccggagggc
atgatagggaacggcacacactgtcaggatatagatgagtgtgcagaggctcagccgtgt
tacacaccaggcgcatgtgtcaacacagcaaaagggtttacctgtgagccctgcccaccc
ggactctggggtcctcctctctctggattcggtgtggaatatgctaaaagtcaccgtcag
gaatgctctgatatagatgaatgtcttgatttggccaatgcctgcacacccaactccatc
tgcatcaacaccattggatcatatcgatgcggtcagtgcaaggttggatatgttgggaat
cagacaactggatgtttccctcggaaatcgtgtgctacgctcagtttcaacccctgcgac
actaacgctcactgtatcattcagcggaacgacgacgttacctgcgcttgtaatgtggga
tgggccggtaatggtcacacctgtggtaaggacacggatattgatggttatccggatcgc
tccttgccctgcatggacaatgacaagcactgcaaacaggacaactgcatctttacgccc
aactccggtcaggaagatgcagataatgatgggattggagaccagtgtgatgaggatgca
gatggcgatggaataaaaaatgtagaggataattgtcggttggtttccaataaagatcag
cagaactctgacactgattcatttggtgacgcatgtgataactgtcccaccgttcccaac
attgaccagaaagacactgacaataacggagagggagatgcatgcgatgacgacatcgat
ggagatggaatccagaatgtgctggataactgtcccaaagtgccaaacccaatgcagacg
gaccgagacagagacggagtgggtgatgcatgtgacagctgtcctgagatcagcaacccc
atgcagacagatgtagacaatgacttagtcggggatgtttgtgacaccaatcaagacact
gatggagacggacaccaggacactcgagataactgtcccatcattccaaacagctctcag
ctcgactcggacaatgacggcatcggagatgactgtgatgatgacgacgataatgacggg
gtgccagacaatcacgccatcaatggcatcggacccgataactgcagactcatttccaac
cccaatcagaaagactcaaacagtaacggagtcggtgacgtatgtgagaatgactttgac
aatgatgcggtgatggatttgattgacgtgtgtccagaaagtgctgaagtcacacttaca
gatttcagagcctatcagacagtcattctggacccagagggtgacgctcagatcgacccg
aactgggtggtgctcaatcagggtatggagattgttcaaaccatgaacagtgacccgggc
ttggcagtgggttacacagcgtttaacggtgtggacttcgagggaacatttcatgttaac
accgtgactgatgatgactatgccggcttcatctttggctatcaggattcatctagtttc
tatgtggtgatgtggaagcagaccgaacagacatactggcagtcgatacccttcaggtcc
atggctgaaccaggcctgcagctcaaggcggtgaagtctcgtacaggccccggcgagttt
cttcgtaatgctctgtggcacacgggggatacggatggagaggtgaaactgctctggaaa
gacccacgaaatgtcggctggcaagataaaacctcgtaccggtggcagctcatccatcgg
cctcaggtcggctacatcagggtgaagctgtatgaaggcacagagatggtggctgactcc
aatgttgtgattgacaccagtatgagaggggggcgcctgggcgtcttctgcttctctcaa
gagaacatcatttggtccaatctgcgctaccgctgtaacgatactgttccagaggacttc
agtacacatcgtaaacaggttctaatgcacataaaggtttga
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