Cyprinus carpio (common carp): 109053467
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Entry
109053467 CDS
T05134
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109053467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109053467
03036 Chromosome and associated proteins [BR:
ccar03036
]
109053467
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109053467
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109053467
PBAF complex
109053467
GBAF(ncBAF) complex
109053467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109053467
NCBI-ProteinID:
XP_042623240
UniProt:
A0A9Q9YP78
LinkDB
All DBs
Position
A12:complement(6029705..6039363)
Genome browser
AA seq
510 aa
AA seq
DB search
MASRLGLSGFPVNSSTPINPSMNPMNPGHSSAMRMSAMPQNSPYRGMGSTPNQYLQRPSM
SPSRGMPMGGMGSMGSPLPGPSYSGAMPMRPGMPQAAMDPARKRLLQQQQQQSGGLMGPR
RGVKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITVDV
QKRKLRIYISNTYTPGKPEGEEAEKVASWELRVEGKLLEDPGKQKRKFSSFFKSLVIELD
KELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLL
GVHTQTRASIMQALWLYIKSNKLQDCHEKEYIICNRYFRQIFGCPRMRFSDIPMKLAGLL
QHPDPIIINHIISVDPNDQKKTACFDIDVEVDDPLKAQMTSFLSSTTSQQEITALEMKIH
ETIESINQLKTQRDFMLSFSNNPQDFIQDWLKSQSRDLKLMTDTVGNPEEERKTEFYHSP
WVKEAVGRYIFSKVQQRRQELEQVLGIRLT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaggttgggtttatcaggtttccccgtcaactccagtaccccaataaacccc
agcatgaaccccatgaacccgggtcacagcagcgccatgagaatgtcagcaatgccgcag
aactcaccctacagagggatgggcagcaccccgaaccagtacctccaacgcccgagtatg
tcacccagccgaggaatgccaatggggggcatggggtctatgggttcccctctacctgga
ccgtcttatagtggagccatgcccatgcgacctgggatgcctcaagccgcgatggaccca
gcccggaagagactccttcagcagcaacagcagcagtccgggggtcttatgggtccaaga
aggggggtgaagaggcgtaagatggctgacaaagtcctcccacaaaggatcagggatctg
gtcccagagtctcaggcttatatggaccttctggcttttgagagaaagctggaccagacc
attgctcgcaaacgaatggagatacaggaagccatcaaaaagcccatcacggtagatgtg
caaaaacgtaaactgaggatctacatttctaatacctacacacctggcaagccagaaggt
gaggaggctgaaaaagtggcatcatgggaacttcgagtggaaggcaaactcctggaggat
cctgggaaacagaaacgaaagttttcatctttctttaaaagccttgtcattgaactggac
aaagaactgtatggcccagacaaccatttggtggagtggcacagaatgcctacaactcag
gagacagatggatttcaggtgaagagaccaggggatgtgaacgtgaaatgtactctcctt
ctcatgctagaccaccagcctccgcagtataagctggatccacgcctggctcgactgttg
ggtgtccacactcagaccagagccagcatcatgcaggccctgtggctttacatcaaaagc
aacaagctacaagactgccatgagaaagagtacattatctgcaaccgatacttcagacag
atttttggctgccctaggatgagattttcggatatccccatgaaacttgccggcctcctt
cagcaccccgaccccatcatcatcaatcatatcatcagtgtggatcccaatgatcagaag
aagactgcatgctttgatatcgatgttgaggtggacgaccctctgaaggctcagatgacc
agcttcctgtcatccacaactagtcaacaggagatcactgccctggagatgaagatccat
gagactattgaatccatcaaccagttgaagacccagagagacttcatgctcagcttcagt
aacaacccgcaggacttcatccaggactggctcaagtctcagagccgagacctcaaatta
atgacagacactgtgggtaatccagaggaggagagaaaaactgagttttaccactcaccc
tgggtcaaagaagctgttggacgttatattttttcaaaggtccagcagaggagacaggaa
ttggaacaggtactgggaatccgactcacttaa
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